Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0296.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.48 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   4.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.0  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -2

Query: 393 RVRSNHSCIVF*LLYCYYLFSIVVTICLVL 304
           R+R+N+    F L +C++LF IV+ + LVL
Sbjct: 658 RLRANNPG--FWLFHCHFLFHIVIGMNLVL 685


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 357 LLYCYYLFSIVVTICLVLLFCDS*DILI 274
           +LY Y +F +V T+ +VL+  +  DIL+
Sbjct: 88  MLYAY-VFYVVTTVLVVLVGYERFDILL 114


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 357 LLYCYYLFSIVVTICLVLLFCDS*DILI 274
           +LY Y +F +V T+ +VL+  +  DIL+
Sbjct: 88  MLYAY-VFYVVTTVLVVLVGYERFDILL 114


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 365 CFSYYIAIIYFRLLLQFVLYCYFAI 291
           C  Y++  ++F LL  +  YC F I
Sbjct: 132 CIYYFVVPLFF-LLCIYYFYCAFII 155


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -2

Query: 357 LLYCYYLFSIVVTICLVLLFCDS*DILI 274
           +LY Y +F +V T+ +VL+  +  DIL+
Sbjct: 88  MLYAY-VFYVVTTVLVVLVGYERFDILL 114


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -2

Query: 357 LLYCYYLFSIVVTICLVL 304
           L +C++LF IV+ + L++
Sbjct: 668 LFHCHFLFHIVIGMNLII 685


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 369 IVF*LLYCYYLFSI 328
           IVF   YCYY  SI
Sbjct: 549 IVFAFCYCYYSISI 562



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 123 KFYKIIIVISRVYLLSNVIFA*MYCNVYRICDLPV 19
           + +  II+I  +   + ++FA  YC  Y I   P+
Sbjct: 532 RIFGFIIIIGCLIQFNTIVFAFCYC-YYSISIRPI 565


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
          protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 50 VMCIVFVICLYG*KEI 3
          ++C+V+  C+Y   EI
Sbjct: 6  ILCLVYATCVYSVSEI 21


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 365 CFSYYIAIIYFRLLLQFVLYCY 300
           CF +    + F + + + LYC+
Sbjct: 530 CFGFITKQLIFMIFVTYQLYCW 551


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,498
Number of Sequences: 336
Number of extensions: 3113
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)