Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0295.Seq
         (605 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4PEX5 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q01K82 Cluster: H0525C06.2 protein; n=5; Oryza sativa|R...    33   6.9  
UniRef50_Q0UQC9 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   6.9  
UniRef50_Q4RTW5 Cluster: Chromosome 12 SCAF14996, whole genome s...    32   9.2  
UniRef50_Q4L3L6 Cluster: Similar to 5'-nucleotidase; n=1; Staphy...    32   9.2  
UniRef50_A5ACQ5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q4PEX5 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 828

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 10/117 (8%)
 Frame = +1

Query: 130 ASIAPVSIAIQPTDP-----SCSERPRPTRTSDATRRVIAQTFP-----ARHRSRNQAHS 279
           +S  P S ++ P+ P     S S  P P  TSDA +  IA+T P         S ++  S
Sbjct: 60  SSPPPSSSSLPPSSPPHPYRSASSTPVPQSTSDAQKVYIARTAPHLLGRGPTPSSSRTPS 119

Query: 280 IASCRIASPGQDDG*AKRERTKQKQT*SLGSDGSRPPRPLALAARTHTTNKLCLTQH 450
           + +   +SP  DDG +  + T    T S  S  S P      A R +       + H
Sbjct: 120 VPTSGRSSPTSDDGCSTPDGTSSTPTSSNQSHHSLPEGYRGPALRKNDAEDFAASPH 176


>UniRef50_Q01K82 Cluster: H0525C06.2 protein; n=5; Oryza sativa|Rep:
           H0525C06.2 protein - Oryza sativa (Rice)
          Length = 347

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 23/71 (32%), Positives = 33/71 (46%)
 Frame = +1

Query: 121 SERASIAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIA 300
           ++ A+    S  + P     S  P PTR S  +R       P R RSR+++ S +  R A
Sbjct: 34  TDPAAAGSPSPPLPPRKRRLSPTPSPTRRSSRSRS--RSRSPRRGRSRSRSRSRSRGRSA 91

Query: 301 SPGQDDG*AKR 333
           SP   DG  +R
Sbjct: 92  SPRYPDGKRRR 102


>UniRef50_Q0UQC9 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 538

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +1

Query: 133 SIAPVSIAIQPTDPSCSERP-RPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPG 309
           SI   +I +QP + +  E P RPT+TS A   V A   P   R+            ++PG
Sbjct: 333 SIKVETINVQPYEEATDELPPRPTKTSPAAAFVPAPNVPPLARNATLPQHTVVQPDSTPG 392

Query: 310 QDDG*AKRERTKQK 351
              G A  E+T+++
Sbjct: 393 ATGGAAIGEKTQER 406


>UniRef50_Q4RTW5 Cluster: Chromosome 12 SCAF14996, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 12 SCAF14996, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 732

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 141 SSQYCDPTHRPELQREASSYANQRRDATRYRSNLSRATS*QESGAQYRFVSHRIARPGRR 320
           SS+YC  + R       SSY+    D +  R   S A S   +G+  R+ S R +   R 
Sbjct: 557 SSKYCGRSSRSLSSSSCSSYSRSLTDLSGPRRRGSLA-SLSSAGSYCRYSSDRRSSTSRE 615

Query: 321 VSEKRTNKTK 350
              KR+ KT+
Sbjct: 616 TDVKRSRKTR 625


>UniRef50_Q4L3L6 Cluster: Similar to 5'-nucleotidase; n=1;
           Staphylococcus haemolyticus JCSC1435|Rep: Similar to
           5'-nucleotidase - Staphylococcus haemolyticus (strain
           JCSC1435)
          Length = 967

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 279 YRFVSHRIARPGRRVSEKRTNKTKTNVKFGV*WVTT 386
           +  VS  I + G+RV +  T  TK NV++G+  VTT
Sbjct: 332 FPIVSSNIYKNGKRVFDPSTTVTKNNVRYGIVGVTT 367


>UniRef50_A5ACQ5 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 334

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +1

Query: 154 AIQPTDPSCSERPRP--TRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASP 306
           AI P  PS SE PR   TRT  A   +     P  HRSRN   +I S R + P
Sbjct: 256 AITPRRPSLSEFPRRHYTRTPIAPGILPPPLHPDAHRSRNYPAAITSGRPSRP 308


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,499,752
Number of Sequences: 1657284
Number of extensions: 9582956
Number of successful extensions: 27160
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27141
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)