Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0295.Seq
(605 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038997-1|AAH38997.1| 210|Homo sapiens C6orf189 protein protein. 31 3.1
BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein. 31 4.2
AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein. 31 4.2
AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein. 31 4.2
AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein. 31 4.2
X92689-1|CAA63371.1| 633|Homo sapiens UDP-GalNAc:polypeptide N-... 30 7.3
L29218-1|AAA61482.1| 499|Homo sapiens clk2 protein. 30 7.3
BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protei... 30 7.3
BC113567-1|AAI13568.1| 633|Homo sapiens UDP-N-acetyl-alpha-D-ga... 30 7.3
BC113565-1|AAI13566.1| 633|Homo sapiens UDP-N-acetyl-alpha-D-ga... 30 7.3
BC053603-1|AAH53603.1| 499|Homo sapiens CDC-like kinase 2 protein. 30 7.3
AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protei... 30 7.3
AL713999-28|CAI95099.1| 499|Homo sapiens CDC-like kinase 2 prot... 30 7.3
AF023268-1|AAC51817.1| 499|Homo sapiens clk2 kinase protein. 30 7.3
AC009495-1|AAY14678.1| 633|Homo sapiens unknown protein. 30 7.3
AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens ... 29 9.6
AC012306-2|AAY14878.1| 732|Homo sapiens unknown protein. 29 9.6
>BC038997-1|AAH38997.1| 210|Homo sapiens C6orf189 protein protein.
Length = 210
Score = 31.1 bits (67), Expect = 3.1
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1
Query: 254 CRAGKV*AITRRVASLVRVGRGLSLQLG 171
C AG+ ++ R V SL+R+GRGL+++ G
Sbjct: 41 CGAGQAGSMLRAVGSLLRLGRGLTVRCG 68
>BC084578-1|AAH84578.1| 719|Homo sapiens AGRN protein protein.
Length = 719
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 136 IAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPGQD 315
+AP S A T P S RPR T + T T P + + A S+ + G
Sbjct: 488 LAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPP--TAPSPAPSLVASAFGESGST 545
Query: 316 DG*AKRERTKQKQT*SLGSDGSRP 387
DG + E + ++ GS G P
Sbjct: 546 DGSSDEELSGDQEASGGGSGGLEP 569
>AL645608-13|CAI15575.2| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 136 IAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPGQD 315
+AP S A T P S RPR T + T T P + + A S+ + G
Sbjct: 1006 LAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPP--TAPSPAPSLVASAFGESGST 1063
Query: 316 DG*AKRERTKQKQT*SLGSDGSRP 387
DG + E + ++ GS G P
Sbjct: 1064 DGSSDEELSGDQEASGGGSGGLEP 1087
>AF016903-1|AAC39776.1| 2026|Homo sapiens agrin precursor protein.
Length = 2026
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 136 IAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPGQD 315
+AP S A T P S RPR T + T T P + + A S+ + G
Sbjct: 987 LAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPP--TAPSPAPSLVASAFGESGST 1044
Query: 316 DG*AKRERTKQKQT*SLGSDGSRP 387
DG + E + ++ GS G P
Sbjct: 1045 DGSSDEELSGDQEASGGGSGGLEP 1068
>AB191264-1|BAD52440.1| 2045|Homo sapiens agrin protein.
Length = 2045
Score = 30.7 bits (66), Expect = 4.2
Identities = 24/84 (28%), Positives = 34/84 (40%)
Frame = +1
Query: 136 IAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPGQD 315
+AP S A T P S RPR T + T T P + + A S+ + G
Sbjct: 1006 LAPSSTAHSQTTPPPSSRPRTTASVPRTTVWPVLTVPP--TAPSPAPSLVASAFGESGST 1063
Query: 316 DG*AKRERTKQKQT*SLGSDGSRP 387
DG + E + ++ GS G P
Sbjct: 1064 DGSSDEELSGDQEASGGGSGGLEP 1087
>X92689-1|CAA63371.1| 633|Homo sapiens UDP-GalNAc:polypeptide
N-acetylgalactosaminyltransferase (GalNAc-T3) protein.
Length = 633
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 401 LSPLAPTLQINYVSLNTPVLAX-SLNTXTFKLPKPYTNN 514
L PL + NY ++ +P +A LNT F P PY +N
Sbjct: 287 LEPLLARIAENYTAVVSPDIASIDLNTFEFNKPSPYGSN 325
>L29218-1|AAA61482.1| 499|Homo sapiens clk2 protein.
Length = 499
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 156 DPTHRPELQREASSYANQRRDATRYRSNLSRATS*QESGAQY 281
D H E QRE SSY +QR ++R R+ + S +Q+
Sbjct: 94 DYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSSQH 135
>BC117255-1|AAI17256.1| 1048|Homo sapiens Sin3A-associated protein,
130kDa protein.
Length = 1048
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 130 ASIAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPG 309
++++ +++IQ + RP ++ D T R+ + PA + Q H++A I S G
Sbjct: 313 SALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTG 372
>BC113567-1|AAI13568.1| 633|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 633
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 401 LSPLAPTLQINYVSLNTPVLAX-SLNTXTFKLPKPYTNN 514
L PL + NY ++ +P +A LNT F P PY +N
Sbjct: 287 LEPLLARIAENYTAVVSPDIASIDLNTFEFNKPSPYGSN 325
>BC113565-1|AAI13566.1| 633|Homo sapiens
UDP-N-acetyl-alpha-D-galactosamine:polypeptide
N-acetylgalactosaminyltransferas protein.
Length = 633
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 401 LSPLAPTLQINYVSLNTPVLAX-SLNTXTFKLPKPYTNN 514
L PL + NY ++ +P +A LNT F P PY +N
Sbjct: 287 LEPLLARIAENYTAVVSPDIASIDLNTFEFNKPSPYGSN 325
>BC053603-1|AAH53603.1| 499|Homo sapiens CDC-like kinase 2 protein.
Length = 499
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 156 DPTHRPELQREASSYANQRRDATRYRSNLSRATS*QESGAQY 281
D H E QRE SSY +QR ++R R+ + S +Q+
Sbjct: 94 DYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSSQH 135
>AY220791-1|AAO63591.1| 1048|Homo sapiens SIN3A-associated protein
130 protein.
Length = 1048
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 130 ASIAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPG 309
++++ +++IQ + RP ++ D T R+ + PA + Q H++A I S G
Sbjct: 313 SALSRPTLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTG 372
>AL713999-28|CAI95099.1| 499|Homo sapiens CDC-like kinase 2
protein.
Length = 499
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 156 DPTHRPELQREASSYANQRRDATRYRSNLSRATS*QESGAQY 281
D H E QRE SSY +QR ++R R+ + S +Q+
Sbjct: 94 DYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSSQH 135
>AF023268-1|AAC51817.1| 499|Homo sapiens clk2 kinase protein.
Length = 499
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 156 DPTHRPELQREASSYANQRRDATRYRSNLSRATS*QESGAQY 281
D H E QRE SSY +QR ++R R+ + S +Q+
Sbjct: 94 DYRHSYEYQRENSSYRSQRSSRRKHRRRRRRSRTFSRSSSQH 135
>AC009495-1|AAY14678.1| 633|Homo sapiens unknown protein.
Length = 633
Score = 29.9 bits (64), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 401 LSPLAPTLQINYVSLNTPVLAX-SLNTXTFKLPKPYTNN 514
L PL + NY ++ +P +A LNT F P PY +N
Sbjct: 287 LEPLLARIAENYTAVVSPDIASIDLNTFEFNKPSPYGSN 325
>AK055979-1|BAB71063.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 710
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 148 SIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPG 309
+++IQ + RP ++ D T R+ + PA + Q H++A I S G
Sbjct: 292 TLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTG 345
>AC012306-2|AAY14878.1| 732|Homo sapiens unknown protein.
Length = 732
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 148 SIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASPG 309
+++IQ + RP ++ D T R+ + PA + Q H++A I S G
Sbjct: 3 TLSIQHPPSAAISIQRPAQSRDVTTRITLPSHPALGTPKQQLHTMAQKTIFSTG 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,090,181
Number of Sequences: 237096
Number of extensions: 1485385
Number of successful extensions: 2702
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2702
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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