Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0295.Seq
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-533|AAF51166.1|  607|Drosophila melanogaster CG17265-PA...    32   0.53 
AY060858-1|AAL28406.1|  607|Drosophila melanogaster GM03282p pro...    31   0.92 
BT015280-1|AAT94509.1|  623|Drosophila melanogaster LD05389p pro...    31   1.6  
AE014135-139|AAF59315.2| 1483|Drosophila melanogaster CG1793-PB,...    31   1.6  
AE014135-138|AAF59314.2| 1483|Drosophila melanogaster CG1793-PA,...    31   1.6  
U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous po...    30   2.8  
AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA...    29   6.5  
X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi...    28   8.6  
S76155-1|AAB33383.1| 1385|Drosophila melanogaster tlr protein.         28   8.6  
L23171-1|AAA79208.1| 1389|Drosophila melanogaster wheeler protein.     28   8.6  
DQ138938-1|ABA86544.1| 1374|Drosophila melanogaster CG8896 protein.    28   8.6  
AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p pro...    28   8.6  
AY051592-1|AAK93016.1|  557|Drosophila melanogaster GH23463p pro...    28   8.6  
AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster alpha-mannos...    28   8.6  
AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA...    28   8.6  
AE013599-2964|AAF57509.1| 1385|Drosophila melanogaster CG8896-PA...    28   8.6  

>AE014134-533|AAF51166.1|  607|Drosophila melanogaster CG17265-PA
           protein.
          Length = 607

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 20/62 (32%), Positives = 29/62 (46%)
 Frame = +1

Query: 91  LRSVYRNVD*SERASIAPVSIAIQPTDPSCSERPRPTRTSDATRRVIAQTFPARHRSRNQ 270
           +RS+ R +   E     P +   QPT P+    P PT TS AT    A + P + + + Q
Sbjct: 455 VRSLERRIQQLEEERTTPTAHLQQPTTPTPQATPTPTVTSAATPAKSAAS-PHQQQQQQQ 513

Query: 271 AH 276
            H
Sbjct: 514 QH 515


>AY060858-1|AAL28406.1|  607|Drosophila melanogaster GM03282p
           protein.
          Length = 607

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +1

Query: 91  LRSVYRNVD*SERASIAPVSIAIQPTDPSCSERPRPTRTSDAT-RRVIAQTFPARHRSRN 267
           +RS+ R +   E     P +   QPT P+    P PT TS AT  +  A     + + + 
Sbjct: 453 VRSLERRIQQLEEERTTPTAHLQQPTTPTPQATPTPTATSAATPAKSAASPHQQQQQQQQ 512

Query: 268 QAH 276
           Q H
Sbjct: 513 QQH 515


>BT015280-1|AAT94509.1|  623|Drosophila melanogaster LD05389p
           protein.
          Length = 623

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 172 PSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASP 306
           P+ S      + SD    +   T    H+ R  +HSI SC +ASP
Sbjct: 150 PNFSNLVNSIKDSDRHENIAITTLHT-HKDRRHSHSIRSCHVASP 193


>AE014135-139|AAF59315.2| 1483|Drosophila melanogaster CG1793-PB,
           isoform B protein.
          Length = 1483

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 172 PSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASP 306
           P+ S      + SD    +   T    H+ R  +HSI SC +ASP
Sbjct: 150 PNFSNLVNSIKDSDRHENIAITTLHT-HKDRRHSHSIRSCHVASP 193


>AE014135-138|AAF59314.2| 1483|Drosophila melanogaster CG1793-PA,
           isoform A protein.
          Length = 1483

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 172 PSCSERPRPTRTSDATRRVIAQTFPARHRSRNQAHSIASCRIASP 306
           P+ S      + SD    +   T    H+ R  +HSI SC +ASP
Sbjct: 150 PNFSNLVNSIKDSDRHENIAITTLHT-HKDRRHSHSIRSCHVASP 193


>U77947-1|AAB41404.1| 2416|Drosophila melanogaster adenomatous
            polyposis coli protein.
          Length = 2416

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/64 (25%), Positives = 31/64 (48%)
 Frame = +3

Query: 171  PELQREASSYANQRRDATRYRSNLSRATS*QESGAQYRFVSHRIARPGRRVSEKRTNKTK 350
            P   R  S   +     +R  SNL+ +++   + A+      RIA   +RV E +T ++ 
Sbjct: 2307 PAASRVVSGRVSSTTPPSRSNSNLNGSSAAAAAAAKINQAQSRIANIWKRVDEAKTKQSS 2366

Query: 351  TNVK 362
            +N++
Sbjct: 2367 SNLR 2370


>AE014297-4275|AAF56820.1| 2417|Drosophila melanogaster CG1451-PA
            protein.
          Length = 2417

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 15/60 (25%), Positives = 30/60 (50%)
 Frame = +3

Query: 183  REASSYANQRRDATRYRSNLSRATS*QESGAQYRFVSHRIARPGRRVSEKRTNKTKTNVK 362
            R  S   +     +R  SNL+ +++   + A+      RIA   +RV E +T ++ +N++
Sbjct: 2312 RVVSGRVSSTTPPSRSNSNLNGSSAAAAAAAKINHAQSRIANIWKRVDEAKTKQSSSNLR 2371


>X77652-1|CAA54732.1| 1108|Drosophila melanogaster putative golgi
           alpha-mannosidaseII protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 158 SNPQTRAAARGLVLREPATRRDALSLKPFPRDIVAGIRRTVSLRVAS 298
           S P+  + A  L+LR+  T   +L L  +P D+  G  R +SLRV +
Sbjct: 702 SKPEHTSYASNLLLRKNPT---SLPLGQYPEDVKFGDPREISLRVGN 745


>S76155-1|AAB33383.1| 1385|Drosophila melanogaster tlr protein.
          Length = 1385

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 190  PRPTRTSDATRRVIAQTFPARHRSRNQAHSIAS 288
            PRPTR   A R V +   P R  S +  HSI S
Sbjct: 1238 PRPTRPGGAARIVDSMPMPMRPPSEHIYHSIES 1270


>L23171-1|AAA79208.1| 1389|Drosophila melanogaster wheeler protein.
          Length = 1389

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 190  PRPTRTSDATRRVIAQTFPARHRSRNQAHSIAS 288
            PRPTR   A R V +   P R  S +  HSI S
Sbjct: 1238 PRPTRPGGAARIVDSMPMPMRPPSEHIYHSIES 1270


>DQ138938-1|ABA86544.1| 1374|Drosophila melanogaster CG8896 protein.
          Length = 1374

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 190  PRPTRTSDATRRVIAQTFPARHRSRNQAHSIAS 288
            PRPTR   A R V +   P R  S +  HSI S
Sbjct: 1231 PRPTRPGGAARIVDSMPMPMRPPSEHIYHSIES 1263


>AY119464-1|AAM50118.1| 1108|Drosophila melanogaster GH03876p
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 158 SNPQTRAAARGLVLREPATRRDALSLKPFPRDIVAGIRRTVSLRVAS 298
           S P+  + A  L+LR+  T   +L L  +P D+  G  R +SLRV +
Sbjct: 702 SKPEHTSYASNLLLRKNPT---SLPLGQYPEDVKFGDPREISLRVGN 745


>AY051592-1|AAK93016.1|  557|Drosophila melanogaster GH23463p
           protein.
          Length = 557

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 190 PRPTRTSDATRRVIAQTFPARHRSRNQAHSIAS 288
           PRPTR   A R V +   P R  S +  HSI S
Sbjct: 410 PRPTRPGGAARIVDSMPMPMRPPSEHIYHSIES 442


>AJ132715-1|CAA10755.1| 1108|Drosophila melanogaster
           alpha-mannosidase II protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 158 SNPQTRAAARGLVLREPATRRDALSLKPFPRDIVAGIRRTVSLRVAS 298
           S P+  + A  L+LR+  T   +L L  +P D+  G  R +SLRV +
Sbjct: 702 SKPEHTSYASNLLLRKNPT---SLPLGQYPEDVKFGDPREISLRVGN 745


>AE014297-932|AAF54375.1| 1108|Drosophila melanogaster CG18802-PA
           protein.
          Length = 1108

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +2

Query: 158 SNPQTRAAARGLVLREPATRRDALSLKPFPRDIVAGIRRTVSLRVAS 298
           S P+  + A  L+LR+  T   +L L  +P D+  G  R +SLRV +
Sbjct: 702 SKPEHTSYASNLLLRKNPT---SLPLGQYPEDVKFGDPREISLRVGN 745


>AE013599-2964|AAF57509.1| 1385|Drosophila melanogaster CG8896-PA
            protein.
          Length = 1385

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 190  PRPTRTSDATRRVIAQTFPARHRSRNQAHSIAS 288
            PRPTR   A R V +   P R  S +  HSI S
Sbjct: 1238 PRPTRPGGAARIVDSMPMPMRPPSEHIYHSIES 1270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,457,585
Number of Sequences: 53049
Number of extensions: 444510
Number of successful extensions: 1200
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)