Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0291.Seq
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P27609 Cluster: Segmentation polarity homeobox protein ... 68 2e-10
UniRef50_Q94902 Cluster: Kuzbanian; n=5; Sophophora|Rep: Kuzbani... 33 3.3
UniRef50_A5JZ52 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q4RQQ9 Cluster: Chromosome 2 SCAF15004, whole genome sh... 33 5.8
UniRef50_Q0FFI4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.8
UniRef50_A5P0G9 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 33 5.8
UniRef50_Q9SXG4 Cluster: Dof zinc finger protein; n=4; Oryza sat... 33 5.8
UniRef50_Q019E3 Cluster: Thioredoxin x; n=2; Ostreococcus|Rep: T... 33 5.8
UniRef50_Q5ZPC5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.6
UniRef50_Q09983 Cluster: Putative uncharacterized protein; n=2; ... 32 7.6
UniRef50_O15225 Cluster: Putative inactivation escape 1 protein;... 32 7.6
>UniRef50_P27609 Cluster: Segmentation polarity homeobox protein
engrailed; n=1; Bombyx mori|Rep: Segmentation polarity
homeobox protein engrailed - Bombyx mori (Silk moth)
Length = 372
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/59 (59%), Positives = 38/59 (64%)
Frame = +2
Query: 371 GEVXAPYAETLAYNPQSQVHLHHNRIEVERGSSNXTIVKVQPDXPLPXRDXVQNEXEYQ 547
G V AP+AETLAY+PQSQ + ERGS N TIVKVQPD P P QNE EYQ
Sbjct: 20 GRVPAPHAETLAYSPQSQYTCTTIESKYERGSPNMTIVKVQPDSPPPSPGRGQNEMEYQ 78
Score = 52.0 bits (119), Expect = 9e-06
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 313 MAFEDRCSPSQANSPGPVTGRSP 381
MAFEDRCSPSQANSPGPVTGR P
Sbjct: 1 MAFEDRCSPSQANSPGPVTGRVP 23
>UniRef50_Q94902 Cluster: Kuzbanian; n=5; Sophophora|Rep: Kuzbanian
- Drosophila melanogaster (Fruit fly)
Length = 1239
Score = 33.5 bits (73), Expect = 3.3
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 289 ASHPR-RVSVSREVFVHRKDGEHNAGPRFRVARDLNASTNVRDRFE 155
ASH R R SV+++ +VH K H R+ RDLN +N D ++
Sbjct: 56 ASHNRARRSVTKDQYVHLKFASHGRDFHLRLKRDLNTFSNKLDFYD 101
>UniRef50_A5JZ52 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1302
Score = 33.1 bits (72), Expect = 4.4
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = +1
Query: 220 HCALRPYDEQTP-HG*QRRVAGGSLRDRW-----NTKMAFEDRCSPSQANSPGPVTGRSP 381
HC R + P G ++ S DRW ++ E C+ + A +P P G
Sbjct: 800 HCGKRGLPQSLPPEGTKKSAVKQSTDDRWGGAKRSSSTEGESECNQNGAPTP-PPNGAPN 858
Query: 382 RAVRXDPXIQPAEPSTLAPQ*NRSRTRLF 468
A P P+EPS+ AP R RLF
Sbjct: 859 GAPNCQPNCPPSEPSS-APTWTAWRARLF 886
>UniRef50_Q4RQQ9 Cluster: Chromosome 2 SCAF15004, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF15004, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 779
Score = 32.7 bits (71), Expect = 5.8
Identities = 27/91 (29%), Positives = 40/91 (43%)
Frame = +3
Query: 6 TRPASTRRKKKENKCRPSCRAAKDPC**APVSININDIRNSRQTVDRVSNSNRSRTLVEA 185
+R S R + ++ CR + P P S R SR R + RSR++V
Sbjct: 351 SRSGSRRAGGRRSRSLSQCRRRRSP---PPRS------RRSRSRSGRRARRTRSRSIVVL 401
Query: 186 FKSRATRNRGPALCSPSLR*TNTSRLTETRR 278
++R +R+R P SP R + SR RR
Sbjct: 402 KRNRRSRSRSPRKRSPPARRRSPSRSPARRR 432
>UniRef50_Q0FFI4 Cluster: Putative uncharacterized protein; n=1;
alpha proteobacterium HTCC2255|Rep: Putative
uncharacterized protein - alpha proteobacterium HTCC2255
Length = 255
Score = 32.7 bits (71), Expect = 5.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2
Query: 379 DFAPSPVPDCWPG*GCSGPRRPFSCSTCHAASHPRRVSVSREVFVHRKDGEHNAGPRFRV 200
D PS C+ G +GP S HP +VS+ + + GE AG +R+
Sbjct: 52 DVLPSDEDGCFDGFELAGPVSELIRSVVTKPLHPAQVSILYPGYPKPRQGETKAGFAYRL 111
Query: 199 ARD 191
RD
Sbjct: 112 TRD 114
>UniRef50_A5P0G9 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 339
Score = 32.7 bits (71), Expect = 5.8
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = -1
Query: 548 LGIPSRSGPXPGLEAXSQAAPSQLXCSKSLVRLRFYCGASVLGSAGCMXGSXRTARGLR 372
LG+PS P G + P+ C R R+ CG + S RTARG R
Sbjct: 123 LGLPSGDRPRAGAARGASWRPTGRTCPSRSARWRWPCGRGAPSATPGRCWSARTARGSR 181
>UniRef50_Q9SXG4 Cluster: Dof zinc finger protein; n=4; Oryza
sativa|Rep: Dof zinc finger protein - Oryza sativa
(Rice)
Length = 235
Score = 32.7 bits (71), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 361 PVTGRSPRAVRXDPXIQPAEPSTL 432
P GRSPR R DP + P EP+ L
Sbjct: 207 PTGGRSPRTARFDPAMHPVEPTGL 230
>UniRef50_Q019E3 Cluster: Thioredoxin x; n=2; Ostreococcus|Rep:
Thioredoxin x - Ostreococcus tauri
Length = 249
Score = 32.7 bits (71), Expect = 5.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +1
Query: 271 RVAGGSLRDRWNTKMAFEDRCSPSQANSPGPVTGRSPRA 387
RV DRW + AF + SP GP G SPRA
Sbjct: 12 RVTSALKSDRWRARGAFATKGSPRVRTRGGPKKGTSPRA 50
>UniRef50_Q5ZPC5 Cluster: Putative uncharacterized protein; n=1;
Angiococcus disciformis|Rep: Putative uncharacterized
protein - Angiococcus disciformis
Length = 746
Score = 32.3 bits (70), Expect = 7.6
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 193 RAPHGTGDPHCALRPYDEQTPHG*QRRVAGGSLRDRWNTKMAFEDRCSPSQANSPGPVTG 372
RAPH P C RP PH + LR + R PS+ P G
Sbjct: 31 RAPHSFRHPPCPRRPLPHPCPHRSRSHHPAPCLRPPSGPRPLRPSRSPPSRPRPAAPSAG 90
Query: 373 RSPR 384
PR
Sbjct: 91 ACPR 94
>UniRef50_Q09983 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1599
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = -1
Query: 539 PSRSGPXPGLEAXSQAAPSQLXCSKSLVRLRFYCGASVLGSAGCMXGSXRTARGLRPVTG 360
PS P + S + P+ C KS + RF C +SV G RG RPV G
Sbjct: 1476 PSTGTPVQCSNSGSNSCPAGYKCQKSTLSNRFQCCSSVSGGGDGEEEETAPVRG-RPVVG 1534
>UniRef50_O15225 Cluster: Putative inactivation escape 1 protein;
n=2; Homo sapiens|Rep: Putative inactivation escape 1
protein - Homo sapiens (Human)
Length = 51
Score = 32.3 bits (70), Expect = 7.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 334 CSGPRRPFSCSTCHAASHPRRVSVSREV 251
CS P+ PF S CH HP V++S+ V
Sbjct: 9 CSCPQLPFMLSPCHMHHHPGHVALSQTV 36
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,302,804
Number of Sequences: 1657284
Number of extensions: 10289747
Number of successful extensions: 36024
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 33624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35999
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -