Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0291.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.0  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   9.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.4  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -2

Query: 373 APSPVPDCWPG*GCSGPRRPFSCSTCHAASHPRRVSVSRE 254
           +PSP     P    S   RPF+C  C+ +   + V  + E
Sbjct: 115 SPSPTSSVSPEVKDSSRDRPFTCEVCNRSFGYKHVLQNHE 154


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 236 GRRAQCGSPVPCGARFKCLH*CPRPIR 156
           G+  QC  P  C   F CL   P  +R
Sbjct: 51  GQSGQCFGPSICCGPFGCLVGTPETLR 77


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 25  DEKKKKTSVVRRVERQRIHANEP 93
           D+KKKKT   +  E + ++  +P
Sbjct: 262 DKKKKKTIKEKYTEDEELNKTKP 284


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = -3

Query: 546 WYSXSFWTXSRXGSGKSGCTFTIVMFEEPRSTSILL 439
           W   + W   R  S  S   F I+      STSILL
Sbjct: 58  WSIFNKWNQFRSYSNFSVFLFDIITIVTLTSTSILL 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,010
Number of Sequences: 336
Number of extensions: 2232
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)