Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0289.Seq
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096991-1|BAC04923.1|  229|Homo sapiens protein ( Homo sapiens ...    31   4.1  

>AK096991-1|BAC04923.1|  229|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39672 fis, clone SMINT2009233. ).
          Length = 229

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +3

Query: 183 RLQLPFNFRYIIT*ISQRKFDRNCSFKYLDSV*VKIYASVAGSRSLLNAPLRSLLSFNAV 362
           R  LPF+ RY ++  S R+F R  S+  L    +++  S  G  S   +PLR+ +  +  
Sbjct: 32  RASLPFSCRYTMSSSSDRRF-RTASWMGLALCALRLATSARGRISWKASPLRTAMGRHLA 90

Query: 363 PKTTE 377
            K+T+
Sbjct: 91  RKSTK 95


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,735,944
Number of Sequences: 237096
Number of extensions: 1577460
Number of successful extensions: 2649
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2649
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)