Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0287.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   4.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   9.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   9.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.4  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 243 RGTCLPAPVSLKKVLKES 190
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 428 RACGFCPKTKST 393
           R+C  C KTKS+
Sbjct: 170 RSCDLCQKTKSS 181


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 110 CWELYCLEHGIQPDGQMPTDKT 175
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +1

Query: 73  TRWPSRSPDR*CLLGALLPGARHPA*WPD 159
           T W   + ++ C+ G L     H   WP+
Sbjct: 117 TCWNGTATEQLCIGGLLYNERTHSCDWPE 145


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 342 RCGQQLCPWSLH 377
           RCG  L P SLH
Sbjct: 701 RCGNHLPPISLH 712


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 424 LADSVLKPNLRFPF 383
           L D V +PNL  PF
Sbjct: 584 LVDEVQQPNLSHPF 597


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,388
Number of Sequences: 336
Number of extensions: 2474
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)