Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0287.Seq
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 156 1e-38
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 151 3e-37
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 137 6e-33
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 95 3e-20
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 67 8e-12
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 67 8e-12
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 67 8e-12
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 66 2e-11
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 64 7e-11
03_01_0034 + 318432-318825,318902-319851 64 7e-11
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 64 7e-11
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 58 3e-09
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 54 6e-08
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.80
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 30 1.1
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.1
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.8
08_01_0312 + 2764744-2767390,2767632-2767990 29 2.4
05_04_0062 + 17607290-17608852 29 2.4
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 4.3
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 4.3
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 4.3
05_04_0068 + 17635693-17637204 28 5.6
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 7.5
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 7.5
12_02_0346 - 17776871-17781445 27 9.9
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 27 9.9
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 27 9.9
07_01_0284 - 2082249-2082256,2082496-2083009 27 9.9
03_02_0220 - 6531255-6532667 27 9.9
02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133 27 9.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 156 bits (378), Expect = 1e-38
Identities = 75/137 (54%), Positives = 87/137 (63%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF F L+ ++ + + D
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 413 RIRKLADQCXGLXGXLI 463
RIRKLAD C GL G L+
Sbjct: 121 RIRKLADNCTGLQGFLV 137
Score = 100 bits (240), Expect = 7e-22
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIG EIVDL L
Sbjct: 69 DLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 151 bits (367), Expect = 3e-37
Identities = 73/137 (53%), Positives = 87/137 (63%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF F L+ ++ + + D
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 413 RIRKLADQCXGLXGXLI 463
RIRKLAD C GL G L+
Sbjct: 121 RIRKLADNCTGLQGFLV 137
Score = 100 bits (239), Expect = 9e-22
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIG EIVDL L
Sbjct: 69 DLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCL 119
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 137 bits (331), Expect = 6e-33
Identities = 66/137 (48%), Positives = 82/137 (59%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRA+F F L+ ++ + + D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 413 RIRKLADQCXGLXGXLI 463
R+RKLAD C GL G L+
Sbjct: 121 RVRKLADNCTGLQGFLV 137
Score = 101 bits (241), Expect = 5e-22
Identities = 44/51 (86%), Positives = 49/51 (96%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+G EIVDL L
Sbjct: 69 DLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCL 119
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 95.1 bits (226), Expect = 3e-20
Identities = 41/51 (80%), Positives = 47/51 (92%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHYT+G E+VDL L
Sbjct: 129 DLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCL 179
Score = 81.4 bits (192), Expect = 4e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 169
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 54.0 bits (124), Expect = 8e-08
Identities = 34/100 (34%), Positives = 45/100 (45%)
Frame = +2
Query: 164 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRK 343
+D T G D+FNTFFSET +GKHVPRA+F F L+ ++
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 344 MRXXXXXXXXXXLEXKS*IWF*DRIRKLADQCXGLXGXLI 463
+ + DR+RKLAD C GL G L+
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLV 197
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 67.3 bits (157), Expect = 8e-12
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 245 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 297
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +2
Query: 35 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 214
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 215 ETGAGKHVPRAV 250
E G+ VPRAV
Sbjct: 233 EASCGRFVPRAV 244
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 67.3 bits (157), Expect = 8e-12
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Score = 54.0 bits (124), Expect = 8e-08
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 67.3 bits (157), Expect = 8e-12
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 223
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 224 AGKHVPRAV 250
G+ VPRAV
Sbjct: 56 CGRFVPRAV 64
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 65.7 bits (153), Expect = 2e-11
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Score = 54.0 bits (124), Expect = 8e-08
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 64.1 bits (149), Expect = 7e-11
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 233 HVPRAV 250
+VPRAV
Sbjct: 59 YVPRAV 64
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 64.1 bits (149), Expect = 7e-11
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVL 117
Score = 54.0 bits (124), Expect = 8e-08
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 64.1 bits (149), Expect = 7e-11
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 233 HVPRAV 250
VPRAV
Sbjct: 59 FVPRAV 64
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/53 (45%), Positives = 35/53 (66%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 233 HVPRAV 250
HVPRAV
Sbjct: 59 HVPRAV 64
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 236 VPRAV 250
+PRA+
Sbjct: 61 IPRAL 65
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGXEIVDLVL 408
L DLEP V++ ++ YR L++ E + + A NN+A G++ G ++VD ++
Sbjct: 66 LVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 192 SSPPPMVLSVGIWPSGWMPCSR 127
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -3
Query: 336 TSNKLFWMKQLS-VCASADLINNSRFKIAKTARGTCLPAPVSLKKVLKESSPPPMVLSV- 163
T NK+ +++ S + + +L++ K+ KT +P LKK+ + +P +VLS+
Sbjct: 211 TLNKILYLRPSSNILSHNELVSLWEKKVGKTFDRVYIPEDEVLKKIQESPAPLNVVLSIN 270
Query: 162 -GIWPSG 145
+W G
Sbjct: 271 HSVWVKG 277
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 189 SPPPMVLSVGIWPSGWMPCSR 127
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 186 PPPMVLSVGIWPSGWMPCSR 127
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 153 ARCPQTRPSGVETILSTLSSARPE 224
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>05_04_0062 + 17607290-17608852
Length = 520
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 151 WPDAHRQDHRGWRRFFQHFLQRDRSWQARXPCCLRDLEPTVVDEVRTGTYRQL-FHPE 321
W H ++ FQ + + W+ P + L ++D+V TG R L HPE
Sbjct: 442 WFPKHSSQLARFKSEFQKTFRHQKLWKVPNPRLRQKLREAIIDKVITGYKRYLEDHPE 499
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 4.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 382 QWCSDHGHSCWPHLP 338
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 96 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 224
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 180 PMVLSVGIWPSGWMPCSR 127
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>05_04_0068 + 17635693-17637204
Length = 503
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +1
Query: 196 FQHFLQRDRSWQARXPCCLRDLEPTVVDEVRTGT--YRQLF--HPEQ 324
FQ + + W+ P R L ++D+V TG YR HPEQ
Sbjct: 437 FQRTCRHQKLWKVPNPELRRSLRKAIIDKVITGPTGYRTYLEAHPEQ 483
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 114 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 221
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 149 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 244
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>12_02_0346 - 17776871-17781445
Length = 1524
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 265 VQDREDSTGXVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSG 86
++ R +T ++ + ++RIV+ D ++ G VL V P GI +
Sbjct: 234 LEKRPKTTPTIIEHELFGRKDLKRIVA--DEIMIGKYRDNDITVLPIVG-PGGIGKT-TF 289
Query: 85 LANVYRDALTHFDLSFFLCLNVELNYN 5
++Y + HF +S ++C++ N N
Sbjct: 290 TQHIYEEVKNHFQISVWICVSQNFNAN 316
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 309 VSSRTTYYW*GRCGQQLCPWSLH 377
VS+RTTY +C Q CPW +H
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVH 259
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/54 (29%), Positives = 33/54 (61%)
Frame = -2
Query: 262 QDREDSTGXVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGIT 101
+DRE+ ++A+S + E++ IV G+VC ++++ D L+ ++LP +T
Sbjct: 46 EDRENEGDLIMAASKVTPEAMAFIVRHGTGIVC--VSMKEDD-LERLELPLMVT 96
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -3
Query: 225 APVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 97
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>03_02_0220 - 6531255-6532667
Length = 470
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 147 LMARCPQTRPSGVETILSTLSSARPELASTXPVLSSRS 260
L+ R P + P LS+L+++ P+L S P+L S S
Sbjct: 77 LLWRLPPSSPLPSSYALSSLAASLPDLPSAVPLLLSSS 114
>02_05_1359 + 35915507-35915905,35915999-35916188,35916298-35917133
Length = 474
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 291 SADLINNSRFKIAKTARGTCLPAPVSLKKVLK-ESSPPP 178
S + + R K +TAR LP P S KK L+ E SP P
Sbjct: 31 SIKFLRDWRHKKERTARPDRLPLPKSSKKGLRIEDSPHP 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,022,006
Number of Sequences: 37544
Number of extensions: 307346
Number of successful extensions: 1090
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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