Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0287.Seq
(548 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 162 1e-40
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 162 2e-40
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 162 2e-40
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 161 3e-40
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 159 1e-39
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 6e-39
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 6e-39
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 153 7e-38
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 5e-36
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 9e-22
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 3e-20
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 91 7e-19
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 7e-19
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 84 6e-17
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 81 4e-16
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 64 1e-10
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 62 2e-10
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 54 8e-08
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26) 30 1.4
SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 29 2.5
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 29 3.3
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 162 bits (394), Expect = 1e-40
Identities = 88/164 (53%), Positives = 95/164 (57%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 236 VPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*DR 415
VPRAVFA F L+ ++ + + DR
Sbjct: 866 VPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDR 925
Query: 416 IRKLADQCXGLXGXLIXXXXXXXXXXXVTXL*WSGXXRXLGKKS 547
IRKLADQC GL G LI T L GKKS
Sbjct: 926 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 969
Score = 155 bits (377), Expect = 2e-38
Identities = 83/164 (50%), Positives = 93/164 (56%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETGAGKH
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 236 VPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*DR 415
VPRAVF F L+ ++ + + DR
Sbjct: 433 VPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDR 492
Query: 416 IRKLADQCXGLXGXLIXXXXXXXXXXXVTXL*WSGXXRXLGKKS 547
+RKLAD C GL G LI T L GKKS
Sbjct: 493 LRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 536
Score = 106 bits (255), Expect = 1e-23
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E++DLVL
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVL 923
Score = 103 bits (248), Expect = 7e-23
Identities = 45/51 (88%), Positives = 49/51 (96%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E +D+VL
Sbjct: 440 DLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVL 490
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 162 bits (393), Expect = 2e-40
Identities = 82/137 (59%), Positives = 89/137 (64%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF F L+ ++ + + D
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLD 120
Query: 413 RIRKLADQCXGLXGXLI 463
RIRKLADQC GL G LI
Sbjct: 121 RIRKLADQCTGLQGFLI 137
Score = 160 bits (389), Expect = 6e-40
Identities = 81/136 (59%), Positives = 88/136 (64%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 236 VPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*DR 415
VPRAVF F L+ ++ + + DR
Sbjct: 495 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDR 554
Query: 416 IRKLADQCXGLXGXLI 463
IRKLADQC GL G LI
Sbjct: 555 IRKLADQCTGLQGFLI 570
Score = 108 bits (259), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G EIVDLVL
Sbjct: 502 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVL 552
Score = 107 bits (258), Expect = 4e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHYT+G EIVDLVL
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVL 119
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 162 bits (393), Expect = 2e-40
Identities = 83/139 (59%), Positives = 89/139 (64%)
Frame = +2
Query: 47 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGA 226
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGA
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 227 GKHVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF 406
GKHVPRAVF F L+ ++ + +
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 407 *DRIRKLADQCXGLXGXLI 463
DRIRKLADQC GL G LI
Sbjct: 183 LDRIRKLADQCTGLQGFLI 201
Score = 161 bits (390), Expect = 5e-40
Identities = 81/137 (59%), Positives = 89/137 (64%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF F L+ ++ + + D
Sbjct: 646 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLD 705
Query: 413 RIRKLADQCXGLXGXLI 463
RIRKLADQC GL G LI
Sbjct: 706 RIRKLADQCTGLQGFLI 722
Score = 149 bits (362), Expect = 1e-36
Identities = 64/66 (96%), Positives = 66/66 (100%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 236 VPRAVF 253
VPRAVF
Sbjct: 574 VPRAVF 579
Score = 108 bits (260), Expect = 3e-24
Identities = 50/51 (98%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG EIVDLVL
Sbjct: 133 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 183
Score = 107 bits (256), Expect = 8e-24
Identities = 47/51 (92%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E++DLVL
Sbjct: 654 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVL 704
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 161 bits (391), Expect = 3e-40
Identities = 87/164 (53%), Positives = 94/164 (57%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 236 VPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*DR 415
VPRAVF F L+ ++ + + DR
Sbjct: 61 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDR 120
Query: 416 IRKLADQCXGLXGXLIXXXXXXXXXXXVTXL*WSGXXRXLGKKS 547
IRKLADQC GL G LI T L GKKS
Sbjct: 121 IRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKS 164
Score = 107 bits (258), Expect = 4e-24
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G EI+DLVL
Sbjct: 68 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVL 118
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 159 bits (387), Expect = 1e-39
Identities = 80/137 (58%), Positives = 88/137 (64%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF F L+ ++ + + D
Sbjct: 61 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 120
Query: 413 RIRKLADQCXGLXGXLI 463
R RKLADQC GL G LI
Sbjct: 121 RCRKLADQCTGLQGFLI 137
Score = 108 bits (259), Expect = 3e-24
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG EI+DLVL
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVL 119
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 157 bits (381), Expect = 6e-39
Identities = 79/137 (57%), Positives = 88/137 (64%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG+GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF F L+ ++ + + D
Sbjct: 61 HVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLD 120
Query: 413 RIRKLADQCXGLXGXLI 463
R+RKLAD C GL G LI
Sbjct: 121 RLRKLADGCTGLQGFLI 137
Score = 104 bits (250), Expect = 4e-23
Identities = 46/51 (90%), Positives = 49/51 (96%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E++D VL
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVL 119
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 157 bits (381), Expect = 6e-39
Identities = 78/136 (57%), Positives = 87/136 (63%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 235
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKH
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 236 VPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*DR 415
VPRAVF F L+ ++ + DR
Sbjct: 480 VPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDR 539
Query: 416 IRKLADQCXGLXGXLI 463
IRKLADQC GL G L+
Sbjct: 540 IRKLADQCSGLQGFLV 555
Score = 129 bits (311), Expect = 2e-30
Identities = 66/122 (54%), Positives = 74/122 (60%)
Frame = +2
Query: 98 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFAIXXXXXX 277
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETGAGKHVPRAVF
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEPTVV 60
Query: 278 MRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*DRIRKLADQCXGLXGX 457
F L+ ++ + + DR+RKLADQC GL G
Sbjct: 61 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGF 120
Query: 458 LI 463
LI
Sbjct: 121 LI 122
Score = 103 bits (247), Expect = 1e-22
Identities = 44/51 (86%), Positives = 50/51 (98%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G +++++VL
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVL 104
Score = 98.7 bits (235), Expect = 3e-21
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHYT+G + +D VL
Sbjct: 487 DLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVL 537
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 153 bits (372), Expect = 7e-38
Identities = 80/137 (58%), Positives = 88/137 (64%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETGAGK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 233 HVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLEXKS*IWF*D 412
HVPRAVF L T L+ ++ + + D
Sbjct: 61 HVPRAVFV----------DLEPTVVALSPEQLITGKEDAANNYARGHYTIGKQQVDQVLD 110
Query: 413 RIRKLADQCXGLXGXLI 463
R+RKLADQC GL G I
Sbjct: 111 RLRKLADQCSGLQGFFI 127
Score = 61.3 bits (142), Expect = 5e-10
Identities = 34/51 (66%), Positives = 35/51 (68%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTVV PEQLITGKEDAANNYARGHYTIG + VD VL
Sbjct: 69 DLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQVL 109
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 147 bits (357), Expect = 5e-36
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 233 HVPRAVF 253
HVPRAVF
Sbjct: 61 HVPRAVF 67
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 116 bits (279), Expect = 1e-26
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET +GK
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSETASGK 255
Query: 233 H 235
H
Sbjct: 256 H 256
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 100 bits (239), Expect = 9e-22
Identities = 42/51 (82%), Positives = 48/51 (94%)
Frame = +1
Query: 256 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
DLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+G E +DL L
Sbjct: 34 DLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLAL 84
Score = 82.2 bits (194), Expect = 3e-16
Identities = 48/102 (47%), Positives = 54/102 (52%)
Frame = +2
Query: 158 MPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFAIXXXXXXMRSALAHTDSCFIQNNLLLV 337
MP+DKTIGGGDDSFNTFF+ETGAGKHVPRAVF F LL
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSG 60
Query: 338 RKMRXXXXXXXXXXLEXKS*IWF*DRIRKLADQCXGLXGXLI 463
++ + + DRIRKLADQC GL G LI
Sbjct: 61 KEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 102
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIG E+V++V+
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVM 1030
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 410 DRIRKLADQCXGLXGXLI 463
D+IRK+ DQC GL G LI
Sbjct: 1031 DKIRKMTDQCSGLQGFLI 1048
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 93.5 bits (222), Expect = 1e-19
Identities = 40/46 (86%), Positives = 44/46 (95%)
Frame = +1
Query: 271 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E++DLVL
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVL 56
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2
Query: 410 DRIRKLADQCXGLXGXLI 463
DRIRKLADQC GL G LI
Sbjct: 57 DRIRKLADQCTGLQGFLI 74
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 90.6 bits (215), Expect = 7e-19
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E++DLVL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVL 44
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2
Query: 410 DRIRKLADQCXGLXGXLI 463
DRIRKLADQC GL G LI
Sbjct: 45 DRIRKLADQCTGLQGFLI 62
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 90.6 bits (215), Expect = 7e-19
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+G E++DLVL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVL 44
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 84.2 bits (199), Expect = 6e-17
Identities = 35/43 (81%), Positives = 40/43 (93%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+G E +DL L
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLAL 44
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +2
Query: 410 DRIRKLADQCXGLXGXLI 463
DRIRKLADQC GL G LI
Sbjct: 45 DRIRKLADQCTGLQGFLI 62
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 81.4 bits (192), Expect = 4e-16
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 280 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+G E +DL L
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTL 44
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 117
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 233 HVPRAV 250
+VPRA+
Sbjct: 59 YVPRAI 64
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 62
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VL
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVL 330
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/71 (40%), Positives = 37/71 (52%)
Frame = +2
Query: 38 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 217
K KMRE + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNE 266
Query: 218 TGAGKHVPRAV 250
GK+VPRAV
Sbjct: 267 ATGGKYVPRAV 277
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 62.5 bits (145), Expect = 2e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVDLVL 408
L DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VL
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVL 117
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE +S+ GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 233 HVPRAV 250
+VPR+V
Sbjct: 59 YVPRSV 64
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 54.0 bits (124), Expect = 8e-08
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGXEIVD 399
L DLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/66 (39%), Positives = 35/66 (53%)
Frame = +2
Query: 53 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 232
MRE + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL--QLERINVYYNEATGGK 58
Query: 233 HVPRAV 250
+VPRA+
Sbjct: 59 YVPRAI 64
Score = 31.9 bits (69), Expect = 0.36
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 250 LRDLEPTVVDEVRTGTYRQLFHPEQLI 330
L DLEP +D VR+G + Q+F P+ +
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFV 91
>SB_50612| Best HMM Match : RVT_1 (HMM E-Value=2.3e-26)
Length = 904
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +2
Query: 56 RECISVHVGQAGVQIGNACWELYCLEHGIQPDG-QMPTDKT-IGGGDDSFNTFFSETGAG 229
+ C S + +GV+ G W L + GIQP P+D + D +NT +
Sbjct: 237 KPCASKKILASGVRYGKLTWTLGAMTSGIQPSTVSAPSDDSDCNVLCDQYNTVLNHF-IE 295
Query: 230 KHVPRAVFAI 259
KH P F++
Sbjct: 296 KHAPVRTFSV 305
>SB_5299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 134 HGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFA 256
+GI+PDGQ D+ +NT F G P A+ A
Sbjct: 708 NGIRPDGQGLVDEGFKTASGIYNTCFERLGMNFQTPEAIVA 748
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 113 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 217
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1
Query: 188 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 78
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 337 KEDAANNYARGHYTIGXEIVD 399
+ AANN+A+G YT G E++D
Sbjct: 2 QNSAANNWAKGFYTEGAELMD 22
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 282 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWXGN 392
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/77 (19%), Positives = 38/77 (49%)
Frame = +3
Query: 18 STFKHRKKLKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETIL 197
+ K ++K+ + V+ + + P +S++ + + + S+L P+ +P V T+
Sbjct: 2485 NAIKTQRKVAATTVT---HAMVNPAYKSLISSPTLASPQVVSALRQTAPKQQPVVVRTLQ 2541
Query: 198 STLSSARPELASTXPVL 248
+ +RP++ PV+
Sbjct: 2542 PQTAVSRPQVTMKPPVI 2558
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,783,960
Number of Sequences: 59808
Number of extensions: 325124
Number of successful extensions: 946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -