Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0287.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    50   4e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   0.32 
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    24   2.9  
Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    23   6.6  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   6.6  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   6.6  
AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.    23   8.8  
AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    23   8.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.8  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 50.4 bits (115), Expect = 4e-08
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +2

Query: 53  MRECISVHVGQAGVQIGNACWE 118
           MRECISVHVGQAGVQIGN CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 39.9 bits (89), Expect = 5e-05
 Identities = 22/46 (47%), Positives = 24/46 (52%)
 Frame = +3

Query: 108 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTXPV 245
           P    T WS AS+   RCP+TR S      ST SS R   AST PV
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPV 64


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect(2) = 0.32
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 159 CPQTRPSGVETILSTLSSARPELAS 233
           C   RPS ++   ++ S  RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188



 Score = 21.8 bits (44), Expect(2) = 0.32
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 102 VMPAGSFTAWSTASSLMARCPQTRPSGV 185
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 217 DRSWQARXPCCLRDLEPTVVD 279
           D+ +Q R   CL  LEP+V D
Sbjct: 111 DQDYQNRTRSCLAALEPSVTD 131


>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +1

Query: 166 RQDHRGWRRFFQHFLQRDRSWQARXPCCLRDLE 264
           R+D+  + R +  F +R+R+ +     C RD+E
Sbjct: 82  RRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVE 114


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 181 GWRRFFQHFLQRDRSWQAR 237
           GW   + HF QR R W  R
Sbjct: 12  GWLWIYLHFNQRYRFWVER 30


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 277  QQQ*VQDREDSTGXVLASSGLAEESVE 197
            QQQ  QD   STG   +S  L++++++
Sbjct: 3016 QQQQQQDARSSTGICTSSDTLSQQTLQ 3042


>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 370 HYTIGXEIVDLVL 408
           HYT G E+VD VL
Sbjct: 1   HYTEGAELVDAVL 13


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 370 HYTIGXEIVDLVL 408
           HYT G E+VD VL
Sbjct: 1   HYTEGAELVDAVL 13


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 370 HYTIGXEIVDLVL 408
           HYT G E+VD VL
Sbjct: 1   HYTEGAELVDAVL 13


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +1

Query: 370 HYTIGXEIVDLVL 408
           HYT G E+VD VL
Sbjct: 1   HYTEGAELVDAVL 13


>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 294 HIQTVVSSRTTYYW*GRCGQQLCPWSLHHW 383
           H   +  +RT +Y   RC +  C +  ++W
Sbjct: 66  HNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 82   PSRSPDR*CLLGALLPGARHPA*WPDAHRQDHR 180
            P+  P +  L+  +LP +  PA  P   R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,536
Number of Sequences: 2352
Number of extensions: 10319
Number of successful extensions: 29
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)