Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0286.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 141 9e-33
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 134 8e-31
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 121 1e-26
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 119 3e-26
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 119 4e-26
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 117 1e-25
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 57 4e-16
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 83 4e-15
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 77 2e-13
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 73 3e-12
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 69 8e-11
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 63 3e-09
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 62 5e-09
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 56 3e-07
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 54 2e-06
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 54 2e-06
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 0.002
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 41 0.018
UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas d... 36 0.51
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 36 0.51
UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky homo... 35 0.88
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 35 0.88
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 35 1.2
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 34 1.5
UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q9YBZ9 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.6
UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2; Sphingob... 32 6.2
UniRef50_Q9UKA1 Cluster: F-box/LRR-repeat protein 5; n=38; Eutel... 32 6.2
UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:... 32 8.2
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 32 8.2
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 32 8.2
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 141 bits (341), Expect = 9e-33
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMMKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 61 IVVNLTGRLNK 71
Score = 99 bits (238), Expect = 3e-20
Identities = 45/58 (77%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
GVISPRFDV + D+E+W NLLPSRQFG++VLTTS GIMDHEEARRKH GGK LG FF
Sbjct: 73 GVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 134 bits (325), Expect = 8e-31
Identities = 65/71 (91%), Positives = 67/71 (94%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMMKHGY GEFEI DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 222 IVVNLTGRLNK 254
IVVNLTGRLNK
Sbjct: 184 IVVNLTGRLNK 194
Score = 88.2 bits (209), Expect = 9e-17
Identities = 40/58 (68%), Positives = 47/58 (81%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
GVIS RFDV + D+++W NLLP RQFG++VLTT GI+DHEEARRKH GGK LG FF
Sbjct: 196 GVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 121 bits (291), Expect = 1e-26
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +3
Query: 63 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVVNLTG 242
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMMKHGYIGEFEI DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 243 RLNK 254
RLNK
Sbjct: 234 RLNK 237
Score = 75.4 bits (177), Expect = 7e-13
Identities = 34/52 (65%), Positives = 41/52 (78%), Gaps = 1/52 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGK 409
GVI+ RFDV D+E+W NL PS QFG++VLTTS GIMDHEEAR+KH G +
Sbjct: 239 GVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 119 bits (287), Expect = 3e-26
Identities = 62/83 (74%), Positives = 72/83 (86%), Gaps = 4/83 (4%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV MKHGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 222 IVVNLTGRLNK--VVS--FHLVL 278
+VV LT RLNK V+S FH+ L
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQL 82
Score = 88.2 bits (209), Expect = 9e-17
Identities = 40/58 (68%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
GVISPRF V + D+E+W NLLPS QFG+++LTTS GI D EEARRKH GGK LG FF
Sbjct: 72 GVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 119 bits (286), Expect = 4e-26
Identities = 55/71 (77%), Positives = 63/71 (88%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM KHGYIGEFE DDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 222 IVVNLTGRLNK 254
IVV L GRLNK
Sbjct: 61 IVVELNGRLNK 71
Score = 93.9 bits (223), Expect = 2e-18
Identities = 43/58 (74%), Positives = 50/58 (86%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
GVISPRFDV + +IE WT LLPSRQFG++VLTTS GIMDHEEARRK++GGK LG F+
Sbjct: 73 GVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 117 bits (282), Expect = 1e-25
Identities = 57/73 (78%), Positives = 62/73 (84%)
Frame = +3
Query: 36 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRA 215
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMMKHGYI EFEI DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 216 GKIVVNLTGRLNK 254
GK+VVNLTGRLNK
Sbjct: 157 GKMVVNLTGRLNK 169
Score = 85.8 bits (203), Expect = 5e-16
Identities = 38/57 (66%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXF 424
GVISPRFDV + D+E+W NLLP+RQFG++VLTT GIMD EE R+KH GG+ LG F
Sbjct: 171 GVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 57.2 bits (132), Expect(2) = 4e-16
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = +3
Query: 36 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKH 173
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 49.2 bits (112), Expect(2) = 4e-16
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +3
Query: 174 GYIGEFEIXDDHRAGKIVVNLTGRLNK 254
GYI EFE DDHRAGKIVV L GR+NK
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINK 133
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 82.6 bits (195), Expect = 4e-15
Identities = 39/71 (54%), Positives = 50/71 (70%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
M +N L++AL +++N E R +Q LI P SK+I+ L VM K GYIGEFE DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 222 IVVNLTGRLNK 254
I+V L GR+NK
Sbjct: 61 IIVQLLGRINK 71
Score = 42.7 bits (96), Expect = 0.004
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 257 GVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXF 424
G ISPR+ + N + R + LPS++ G ++++T G+M H + R+ +GG LG
Sbjct: 73 GPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYV 132
Query: 425 F 427
+
Sbjct: 133 Y 133
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 77.4 bits (182), Expect = 2e-13
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+GYIGEFE DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 222 IVVNLTGRLNK 254
V L GR+NK
Sbjct: 61 YRVQLLGRINK 71
Score = 56.8 bits (131), Expect = 3e-07
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 QGGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
+ G I PRF V +++ E+W LP+ +FG L+++TS G+M H+EA K +GG+ + +
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 73.3 bits (172), Expect = 3e-12
Identities = 32/65 (49%), Positives = 47/65 (72%)
Frame = +3
Query: 57 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVVNL 236
+L+DAL++I NAE+RGK V ++P S V+ FL +M + GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 237 TGRLN 251
GR+N
Sbjct: 65 QGRVN 69
Score = 60.9 bits (141), Expect = 2e-08
Identities = 27/53 (50%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +2
Query: 272 RFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
R DV +IE++T LP+RQ+GY+V+TT GI+DHEEA ++++GG+ LG F+
Sbjct: 77 RQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 68.5 bits (160), Expect = 8e-11
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 222 IVVNLTGRLNK 254
V L GR+NK
Sbjct: 61 YSVTLVGRINK 71
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
G I PR+ V ERW LP++ FG L+LTTS G+M EAR K +GG+ L +
Sbjct: 73 GAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 63.3 bits (147), Expect = 3e-09
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVVNLT 239
L++ K+I+NA + GKRQ+L+R ++ + FL M++HGYI F D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 240 GRLNK 254
GRLN+
Sbjct: 65 GRLNR 69
Score = 59.7 bits (138), Expect = 4e-08
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
G ISP + V + IE + T LLP+RQFG+++ TS GI+DH+E +++GGK LG F+
Sbjct: 71 GAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +3
Query: 51 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVV 230
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE ++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 231 NLTGRLN 251
L+G +N
Sbjct: 63 ELSGNIN 69
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
G I PRF + + E + LP+R FG L+++T+ G+M ++AR++ LGG L +
Sbjct: 72 GAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
GVI PR V ++IER+ + LP++ FG ++LTT+ GIM H EAR+ +GGK L +
Sbjct: 72 GVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 54.0 bits (124), Expect = 2e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +3
Query: 42 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGK 221
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE +D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 222 IVVNLTGRLNK 254
V+L ++ K
Sbjct: 61 FSVHLLAKITK 71
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
G ISPRF V + W LPS G LV+TT+ G+M H EA + +GG +G +
Sbjct: 73 GAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 53.6 bits (123), Expect = 2e-06
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
G + PR+ ++ E+W LP+R +G L++TTS G+M H EAR + +GG+ + +
Sbjct: 90 GAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Frame = +3
Query: 36 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRA 215
L M + ++AL + NAE G + P S +I L V+ GY+ FE DD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 216 GKIVVNLTGRLNK 254
GK V L G +N+
Sbjct: 76 GKFEVELKGAINE 88
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 251 QGGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTSGGIMDHEEARRKHLGG 406
+ I PRF V +++E++ LP+ FG L+L+TS G++ + EA+ + +GG
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGG 122
Score = 41.9 bits (94), Expect = 0.008
Identities = 17/67 (25%), Positives = 36/67 (53%)
Frame = +3
Query: 54 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVVN 233
++++D L + N ++G+ + P S +I+K + +M + GYI + + D R I +
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSRGKIIEIE 63
Query: 234 LTGRLNK 254
L+ N+
Sbjct: 64 LSEYFNE 70
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 40.7 bits (91), Expect = 0.018
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = +3
Query: 180 IGEFEIXDDHRAGKIVVNLTGRLNKVVS 263
IG+FE+ DDHRAGKIV NL+ ++ +V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_Q9G903 Cluster: Ribosomal protein S8; n=1; Ochromonas
danica|Rep: Ribosomal protein S8 - Ochromonas danica
Length = 128
Score = 35.9 bits (79), Expect = 0.51
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVVNLT 239
L D L S+ NA K V I+ S++I K+L ++ K G I F D +VNL
Sbjct: 5 LIDFLLSLKNASLAKKDFVKIKE-SRLISKYLPILYKEGIIQSFFKKQDSCNSFYIVNLR 63
Query: 240 GRLNKVVSFHLVLM-FPSTILK 302
NKVV+ + L+ PS I K
Sbjct: 64 HFQNKVVTQDIQLISTPSKIKK 85
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 35.9 bits (79), Expect = 0.51
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 272 RFDVPINDIERWTNLLPSRQ--FGYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
R VP + + R LP + G +L+T G+M EAR+K LGG+ +G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_UPI00015B4751 Cluster: PREDICTED: similar to jerky
homolog-like (mouse) (predicted); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to jerky
homolog-like (mouse) (predicted) - Nasonia vitripennis
Length = 1386
Score = 35.1 bits (77), Expect = 0.88
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIR--PCSKVIVKFL--TVMMKHGYIGEFEIXDDHRAGKIV 227
+++ +K N + R + Q L R P ++VI++ L ++M+K+G + + + DD R K+
Sbjct: 129 VANKIKKDPNPDLRSETQKLTRQLPSARVILERLPDSLMVKNGKLSDNDCQDDSRKRKLS 188
Query: 228 VNLTGRLNKVVSFHLVLMFPSTILKDGLIC 317
+ +N L + +P T+ + +IC
Sbjct: 189 SCYSSDVNACKKSRLDVAYPETLKRIKVIC 218
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 35.1 bits (77), Expect = 0.88
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 54 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEI 197
+ +SD L I NA K+ VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 60 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEF 191
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 34.3 bits (75), Expect = 1.5
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +3
Query: 150 FLTVMMKHGYIGEFEIXDDHRAGKIVVNLTGRLNK 254
F+TV MK G+FEI D+ G+I V+L G LNK
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNK 34
>UniRef50_Q76YD0 Cluster: Putative uncharacterized protein; n=1;
Aeromonas phage Aeh1|Rep: Putative uncharacterized
protein - Aeromonas phage Aeh1
Length = 85
Score = 33.5 bits (73), Expect = 2.7
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 45 VRMN-VLSDALKSIHNAEKRGKRQVLIRP-CSKVIVKFLTVMMKHGYIGEFEIXDDHRA 215
+RMN ++++ K I +A +GKR + S + + + + KHGY EF + DHR+
Sbjct: 17 LRMNDLINNISKRIESASVQGKRVTYVYDVASDIRSEVINEITKHGYEVEFVVETDHRS 75
>UniRef50_Q9YBZ9 Cluster: Putative uncharacterized protein; n=1;
Aeropyrum pernix|Rep: Putative uncharacterized protein -
Aeropyrum pernix
Length = 153
Score = 33.5 bits (73), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 57 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGYIGEFEIXDDHRAGKIVVNL 236
VL D L + + ++R + L K V ++ V + Y+GE I + +I V
Sbjct: 68 VLEDILSKLPSHDRRYLLETLEERVDKNGVLYIRVSKQDAYLGEARIYEGDDVIRIAVGF 127
Query: 237 TGRLNKVVSFHLVLM 281
G K VSF+ L+
Sbjct: 128 QGGRRKAVSFYRELL 142
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.1 bits (72), Expect = 3.6
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2
Query: 117 GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 1
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q2S3Q0 Cluster: 30S ribosomal protein S8; n=2;
Sphingobacteriales|Rep: 30S ribosomal protein S8 -
Salinibacter ruber (strain DSM 13855)
Length = 133
Score = 32.3 bits (70), Expect = 6.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARRKHLGGKXLGXFF 427
G ++L+TS G+M +EARR +GG+ L F
Sbjct: 103 GIVILSTSRGVMSDKEARRFGVGGEVLAKVF 133
>UniRef50_Q9UKA1 Cluster: F-box/LRR-repeat protein 5; n=38;
Euteleostomi|Rep: F-box/LRR-repeat protein 5 - Homo
sapiens (Human)
Length = 691
Score = 32.3 bits (70), Expect = 6.2
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +2
Query: 206 SQSWQDCCKSHRQTKQGGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 358
S SW CC+S R G DV + I R +L S Q G+L +TS
Sbjct: 375 SWSWLGCCQSLRHLDLSG-CEKITDVALEKISRALGILTSHQSGFLKTSTS 424
>UniRef50_Q73NX9 Cluster: ISTde2, transposase; n=4; Bacteria|Rep:
ISTde2, transposase - Treponema denticola
Length = 358
Score = 31.9 bits (69), Expect = 8.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 251 QGGVISPRFDVPINDIERWTNLLPSRQFGY 340
+G IS D+ I +E W N P R FGY
Sbjct: 321 KGADISKYSDIQIKQVENWINNYPRRMFGY 350
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARRKHLGGKXL 415
G ++L+TS GIM EAR K +GG+ L
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 31.9 bits (69), Expect = 8.2
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 335 GYLVLTTSGGIMDHEEARRKHLGGKXL 415
G ++L+TS GIM EAR K +GG+ L
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEIL 130
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,232,332
Number of Sequences: 1657284
Number of extensions: 6787861
Number of successful extensions: 13609
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 13358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13598
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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