Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0285.Seq
         (429 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical pr...    41   4e-04
Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical pr...    32   0.20 
Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical pr...    30   0.61 
Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical pr...    30   0.61 
Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical pr...    30   0.61 
AF000262-5|AAN60522.1|  100|Caenorhabditis elegans Hypothetical ...    29   1.1  
AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical...    29   1.1  
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z32840-5|CAD88215.1|  509|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z32840-4|CAA83680.1|  460|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr...    26   10.0 
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p...    26   10.0 
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p...    26   10.0 
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr...    26   10.0 

>Z69885-4|CAA93757.1|  208|Caenorhabditis elegans Hypothetical
           protein T04C10.4 protein.
          Length = 208

 Score = 40.7 bits (91), Expect = 4e-04
 Identities = 21/63 (33%), Positives = 36/63 (57%)
 Frame = -2

Query: 245 DRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKALM 66
           +++ R K QN   ATRYR+ K+      +   + L   + +L ++ S+L+REIRY K  M
Sbjct: 139 EKKERKKAQNRLAATRYREKKRREKEEAMTCIEGLSVTNGKLKDQVSELEREIRYFKKFM 198

Query: 65  RDL 57
            ++
Sbjct: 199 TEM 201


>Z32840-3|CAB63430.2|  457|Caenorhabditis elegans Hypothetical
           protein C07G2.2a protein.
          Length = 457

 Score = 31.9 bits (69), Expect = 0.20
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -2

Query: 248 DDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKAL 69
           D+RR+   E+N   A RYR+ KK     ++   Q +     +L  +   L+RE+  + AL
Sbjct: 342 DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQLLTQNQVLRRELERVTAL 401

Query: 68  MRD 60
           + +
Sbjct: 402 LTE 404


>Z77136-9|CAI91180.1|  474|Caenorhabditis elegans Hypothetical
           protein ZC376.7c protein.
          Length = 474

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -2

Query: 251 VDDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKA 72
           VD+   R +  N   A RYR+ K+        E Q +  R+  L +K   L+REI  +K 
Sbjct: 405 VDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMKK 464

Query: 71  LMRDL 57
            +R +
Sbjct: 465 ELRKM 469


>Z77136-7|CAD54177.1|  472|Caenorhabditis elegans Hypothetical
           protein ZC376.7b protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -2

Query: 251 VDDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKA 72
           VD+   R +  N   A RYR+ K+        E Q +  R+  L +K   L+REI  +K 
Sbjct: 403 VDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMKK 462

Query: 71  LMRDL 57
            +R +
Sbjct: 463 ELRKM 467


>Z77136-6|CAB00883.1|  488|Caenorhabditis elegans Hypothetical
           protein ZC376.7a protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 20/65 (30%), Positives = 31/65 (47%)
 Frame = -2

Query: 251 VDDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKA 72
           VD+   R +  N   A RYR+ K+        E Q +  R+  L +K   L+REI  +K 
Sbjct: 419 VDEETDRRRMLNRIAAVRYREKKRAEKKGRKMEFQEVADRNRILLQKERQLKREINSMKK 478

Query: 71  LMRDL 57
            +R +
Sbjct: 479 ELRKM 483


>AF000262-5|AAN60522.1|  100|Caenorhabditis elegans Hypothetical
           protein C48E7.11 protein.
          Length = 100

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -2

Query: 248 DDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKAL 69
           +D  S  +++N     R RQ K+       ++   L++ +  L  K   LQ+E+ +LK +
Sbjct: 17  EDDYSTKRKRNNEAVNRTRQKKRQEENDTAEKVDELKKENETLERKVEQLQKELSFLKEM 76

Query: 68  MRDLFKAKG 42
                K  G
Sbjct: 77  FMAYAKNDG 85


>AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical
           protein W08E12.1 protein.
          Length = 228

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 21/64 (32%), Positives = 31/64 (48%)
 Frame = -2

Query: 236 SRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTELGEKCSDLQREIRYLKALMRDL 57
           SR ++QN   A RYR  +K     LL + +    R+  L  +   L++E+    A MR  
Sbjct: 165 SRKRQQNKVAAARYRDKQKAKWQDLLDQLEAEEDRNQRLKLQAGHLEKEV----AEMRQA 220

Query: 56  FKAK 45
           F AK
Sbjct: 221 FLAK 224


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 128 TELGEKCSDLQREIRYL 78
           +E+ EK  DL+RE+RYL
Sbjct: 808 SEIAEKARDLEREVRYL 824


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 128 TELGEKCSDLQREIRYL 78
           +E+ EK  DL+RE+RYL
Sbjct: 824 SEIAEKARDLEREVRYL 840


>Z32840-5|CAD88215.1|  509|Caenorhabditis elegans Hypothetical
           protein C07G2.2c protein.
          Length = 509

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -2

Query: 248 DDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTEL---GEKCSDLQREIRYL 78
           D+RR+   E+N   A RYR+ KK     ++   Q +     +L     +   L+RE+  +
Sbjct: 391 DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQLLAIQTQNQVLRRELERV 450

Query: 77  KALMRD 60
            AL+ +
Sbjct: 451 TALLTE 456


>Z32840-4|CAA83680.1|  460|Caenorhabditis elegans Hypothetical
           protein C07G2.2b protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
 Frame = -2

Query: 248 DDRRSRXKEQNXNXATRYRQXKKX*VXVLLKEEQTLRQRHTEL---GEKCSDLQREIRYL 78
           D+RR+   E+N   A RYR+ KK     ++   Q +     +L     +   L+RE+  +
Sbjct: 342 DERRNTILERNKAAAVRYRKRKKEEHDDMMGRVQAMEAEKNQLLAIQTQNQVLRRELERV 401

Query: 77  KALMRD 60
            AL+ +
Sbjct: 402 TALLTE 407


>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 PXMVVKNVERHLHYYWNVAEMPXE 383
           P + V++ +RH   YW + E P E
Sbjct: 128 PHLSVQSQQRHSREYWPIPEFPSE 151


>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 PXMVVKNVERHLHYYWNVAEMPXE 383
           P + V++ +RH   YW + E P E
Sbjct: 143 PHLSVQSQQRHSREYWPIPEFPSE 166


>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 PXMVVKNVERHLHYYWNVAEMPXE 383
           P + V++ +RH   YW + E P E
Sbjct: 143 PHLSVQSQQRHSREYWPIPEFPSE 166


>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 PXMVVKNVERHLHYYWNVAEMPXE 383
           P + V++ +RH   YW + E P E
Sbjct: 128 PHLSVQSQQRHSREYWPIPEFPSE 151


>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 PXMVVKNVERHLHYYWNVAEMPXE 383
           P + V++ +RH   YW + E P E
Sbjct: 143 PHLSVQSQQRHSREYWPIPEFPSE 166


>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 312 PXMVVKNVERHLHYYWNVAEMPXE 383
           P + V++ +RH   YW + E P E
Sbjct: 143 PHLSVQSQQRHSREYWPIPEFPSE 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,661,184
Number of Sequences: 27780
Number of extensions: 71225
Number of successful extensions: 195
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 194
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)