Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0284.Seq
         (547 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130620-1|AAI30621.1| 1301|Homo sapiens zinc finger protein 532...    30   6.1  
BC130618-1|AAI30619.1| 1301|Homo sapiens ZNF532 protein protein.       30   6.1  
BC036366-1|AAH36366.1| 1100|Homo sapiens ZNF532 protein protein.       30   6.1  
AY039256-1|AAK72122.1| 1301|Homo sapiens zinc finger protein pro...    30   6.1  
AK001559-1|BAA91755.1|  612|Homo sapiens protein ( Homo sapiens ...    30   6.1  
AB046849-1|BAB13455.1| 1329|Homo sapiens KIAA1629 protein protein.     30   6.1  

>BC130620-1|AAI30621.1| 1301|Homo sapiens zinc finger protein 532
           protein.
          Length = 1301

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 318 MPTKILFNSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCSTRR 467
           +P +  + S Q +  H  P  Y+C  C  + +S H   H+ + C   TRR
Sbjct: 792 LPNQCSYASHQRIHQHKSP--YTCPECGAICRSVHFQTHVTKNCLHYTRR 839


>BC130618-1|AAI30619.1| 1301|Homo sapiens ZNF532 protein protein.
          Length = 1301

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 318 MPTKILFNSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCSTRR 467
           +P +  + S Q +  H  P  Y+C  C  + +S H   H+ + C   TRR
Sbjct: 792 LPNQCSYASHQRIHQHKSP--YTCPECGAICRSVHFQTHVTKNCLHYTRR 839


>BC036366-1|AAH36366.1| 1100|Homo sapiens ZNF532 protein protein.
          Length = 1100

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 318 MPTKILFNSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCSTRR 467
           +P +  + S Q +  H  P  Y+C  C  + +S H   H+ + C   TRR
Sbjct: 792 LPNQCSYASHQRIHQHKSP--YTCPECGAICRSVHFQTHVTKNCLHYTRR 839


>AY039256-1|AAK72122.1| 1301|Homo sapiens zinc finger protein
           protein.
          Length = 1301

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 318 MPTKILFNSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCSTRR 467
           +P +  + S Q +  H  P  Y+C  C  + +S H   H+ + C   TRR
Sbjct: 792 LPNQCSYASHQRIHQHKSP--YTCPECGAICRSVHFQTHVTKNCLHYTRR 839


>AK001559-1|BAA91755.1|  612|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10697 fis, clone NT2RP3000527, weakly similar to
           ZINC FINGER PROTEIN 43. ).
          Length = 612

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 318 MPTKILFNSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCSTRR 467
           +P +  + S Q +  H  P  Y+C  C  + +S H   H+ + C   TRR
Sbjct: 103 LPNQCSYASHQRIHQHKSP--YTCPECGAICRSVHFQTHVTKNCLHYTRR 150


>AB046849-1|BAB13455.1| 1329|Homo sapiens KIAA1629 protein protein.
          Length = 1329

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 318 MPTKILFNSRQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCSTRR 467
           +P +  + S Q +  H  P  Y+C  C  + +S H   H+ + C   TRR
Sbjct: 820 LPNQCSYASHQRIHQHKSP--YTCPECGAICRSVHFQTHVTKNCLHYTRR 867


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,769,867
Number of Sequences: 237096
Number of extensions: 1189771
Number of successful extensions: 1600
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1600
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)