Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0284.Seq
(547 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p pro... 29 4.1
AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein. 29 4.1
AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA... 29 4.1
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 28 7.2
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 28 7.2
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 28 7.2
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 28 7.2
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 28 7.2
AY051904-1|AAK93328.1| 751|Drosophila melanogaster LD39445p pro... 28 7.2
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 28 7.2
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 28 7.2
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 28 7.2
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 28 7.2
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 28 7.2
>AY069097-1|AAL39242.1| 813|Drosophila melanogaster GH11602p
protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 345 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 458
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AF029776-1|AAC39102.1| 813|Drosophila melanogaster GCN5 protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 345 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 458
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>AE014296-2156|AAF49904.1| 813|Drosophila melanogaster CG4107-PA
protein.
Length = 813
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 345 RQIVCNHCPPFGYSCQNCFRV*KSRHHLVHLRRICSCS 458
R + ++CP F C+N R H+ HL I S S
Sbjct: 118 RDVESSYCPEFNEECRNTSCRHSLRSHIAHLDNISSSS 155
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3095 CSKYTPKYHKRNGNVSTAANGAH 3117
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3463 CSKYTPKYHKRNGNVSTAANGAH 3485
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3358
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3095 CSKYTPKYHKRNGNVSTAANGAH 3117
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3726
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3463 CSKYTPKYHKRNGNVSTAANGAH 3485
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3496 CSKYTPKYHKRNGNVSTAANGAH 3518
>AY051904-1|AAK93328.1| 751|Drosophila melanogaster LD39445p
protein.
Length = 751
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 488 CSKYTPKYHKRNGNVSTAANGAH 510
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3095 CSKYTPKYHKRNGNVSTAANGAH 3117
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3095 CSKYTPKYHKRNGNVSTAANGAH 3117
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3095 CSKYTPKYHKRNGNVSTAANGAH 3117
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3463 CSKYTPKYHKRNGNVSTAANGAH 3485
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +3
Query: 447 CSCSTRRHHHRNGRXSTAVVGNH 515
CS T ++H RNG STA G H
Sbjct: 3463 CSKYTPKYHKRNGNVSTAANGAH 3485
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,150,944
Number of Sequences: 53049
Number of extensions: 357108
Number of successful extensions: 602
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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