Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0272.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   2.7  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   2.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   2.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 308 IDCSKPKPCEEGCAC 264
           +D  KP PC+ G  C
Sbjct: 223 VDDCKPNPCQNGGTC 237


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 43  LFTYDEFYNILEHFYMR 93
           + T D+FYN L H + R
Sbjct: 395 ILTGDQFYNFLNHNFDR 411


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 142 DF-KNIILYFSKLIKKLFSYKSALKYCKTHHR*TKI 38
           DF + I+L+ S LIK    Y+  +   +  HR  KI
Sbjct: 171 DFIQQIMLFVSALIKAFSKYQFVVLVLQLQHRFGKI 206


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +1

Query: 1   FLIIICQFNNK 33
           F III QFNNK
Sbjct: 336 FFIIIIQFNNK 346


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 142 DF-KNIILYFSKLIKKLFSYKSALKYCKTHHR*TKI 38
           DF + I+L+ S LIK    Y+  +   +  HR  KI
Sbjct: 171 DFIQQIMLFVSALIKAFSKYQFVVLVLQLQHRFGKI 206


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 11/36 (30%), Positives = 14/36 (38%)
 Frame = -3

Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNC 354
           CV K+   +      V RE C    C+ E    T C
Sbjct: 120 CVTKDEPFRPHPHNLVGREGCKKGVCTMEINSDTMC 155


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 485 DQKSCKAXCVCKEG 444
           D K+C A  VC+ G
Sbjct: 568 DPKNCAAYYVCRSG 581


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,626
Number of Sequences: 336
Number of extensions: 2578
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)