Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0272.Seq
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 55 3e-08
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 40 8e-04
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 40 8e-04
U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 38 0.004
U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 35 0.038
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 35 0.038
U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical p... 33 0.087
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 33 0.15
U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of s... 32 0.20
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 32 0.20
Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical p... 32 0.27
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 32 0.27
Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical pr... 31 0.46
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 31 0.46
Z74031-3|CAA98455.1| 245|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 3.3
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.3
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.3
Z77662-3|CAB01194.1| 284|Caenorhabditis elegans Hypothetical pr... 28 4.3
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 28 4.3
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 27 5.7
U53149-1|AAD31546.1| 328|Caenorhabditis elegans Prion-like-(q/n... 27 5.7
Z99942-6|CAI79199.1| 119|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 7.6
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 27 7.6
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 27 7.6
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 27 10.0
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 27 10.0
AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 54.8 bits (126), Expect = 3e-08
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -3
Query: 497 CPXVDQKSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSG----ENEEFTNCTNPXPPRT 330
CP KSCK C+C G++K+ GKCV ++CP+ + + E +E+T+C P +
Sbjct: 821 CPGPKNKSCKRACICAPGFVKE-NGKCVTLDSCPDHDHTNITCLETQEYTDCL-PKCQKQ 878
Query: 329 CNSLVARIDCSKPKPCEEGCACK 261
C+ C C GC C+
Sbjct: 879 CSGAP---KCEAGSACTPGCFCR 898
Score = 47.2 bits (107), Expect = 7e-06
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = -3
Query: 497 CPXVDQKS-----CKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPR 333
CP + +K+ C C C GYL+ G+C ++CP EC G+NEE+ C
Sbjct: 758 CPGILKKTECTNRCGQGCACAYGYLRSSDGECYKPKDCPP-EC-GQNEEY-RCEK--CAG 812
Query: 332 TCNSLVARIDCSKPKPCEEGCACKP 258
TC + K K C+ C C P
Sbjct: 813 TCKNPEPNCPGPKNKSCKRACICAP 837
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 476 SCKAXCVCKEGYLKDXXGKCVARENC-PN*ECSGENEEFTNCTNPXPPRTCNSLVARIDC 300
+C C C+ Y D G CV + C +C G +E+++NC C+ L A
Sbjct: 890 ACTPGCFCRSNYKLDSNGDCVHKRKCSETTKCPG-SEKWSNCIG--NANLCD-LTAFSRL 945
Query: 299 SKPKPCEEGCAC 264
S C GC C
Sbjct: 946 SDKFNCRSGCIC 957
Score = 36.3 bits (80), Expect = 0.012
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 485 DQKSCKAXCVCKEGYLKDXXGKCVARENC 399
D+ +C++ C+C +G +D G CVA + C
Sbjct: 947 DKFNCRSGCICADGLARDKNGTCVATDKC 975
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -3
Query: 419 CVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPCEEGCAC 264
C+ + N +N+ T+C NP C ++ + +C+ C +GCAC
Sbjct: 728 CIVQTNVDTFTKCPKNQTMTDCLNPCSEDKCPGILKKTECT--NRCGQGCAC 777
Score = 34.7 bits (76), Expect = 0.038
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 14/93 (15%)
Frame = -3
Query: 494 PXVDQKSCKAXCVCKEGYLKDXXGKCVARENCP-----N*ECSGENEEFTNCTNPXPPRT 330
P ++ +C + C C GY++ G C CP C+G E +T C P +T
Sbjct: 408 PCMNSTTCTSGCACIRGYVR-INGVCELMSKCPVTVTEGVSCAGA-EVYTACM-PECEKT 464
Query: 329 CNSLVARI---------DCSKPKPCEEGCACKP 258
C+ + + P C GC C+P
Sbjct: 465 CSGVPNQFCIEAKNGTATTKAPAKCLPGCTCRP 497
Score = 31.1 bits (67), Expect = 0.46
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 422 KCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPCEEGCAC 264
+C+ + P +C G NEEF+ C + TC C C GCAC
Sbjct: 374 QCIQLKQAP--KCVGANEEFSACKSGC-EGTCEE--PSPPCMNSTTCTSGCAC 421
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = -3
Query: 497 CPXVDQKSCKAXCVCKEGYLKDXXGKCVARENCP-----N*ECSGENEEFTNCTNPXPPR 333
CP KSCK C+C G++K GKCV +CP N C G +E+T+C P +
Sbjct: 574 CPGPKNKSCKRACICAPGFVK-KNGKCVTLASCPDHDHTNITCLG-TQEYTDCM-PKCQQ 630
Query: 332 TCNSLVARIDCSKPKPCEEGCACKPD 255
C+ + C GC C+P+
Sbjct: 631 LCSGAQQCETGMEIAMCTPGCVCRPN 656
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -3
Query: 479 KSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDC 300
K C C C GYL+ G+C ++CP EC G+NEE+ C TC +
Sbjct: 522 KHCGQGCACASGYLRSSDGECYKPKDCPP-EC-GQNEEY-RCEK--CAGTCKNPEPNCPG 576
Query: 299 SKPKPCEEGCACKP 258
K K C+ C C P
Sbjct: 577 PKNKSCKRACICAP 590
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SCKAXCVCKEGYLKDXXGKCVARENCP--N*ECSGENEEFTNCTNPXPPRTCN-SLVARI 306
+C+ C C +G++++ G CV CP + G NEE C N + C +
Sbjct: 130 ACQVGCSCMDGFVRNNQGVCVKEAECPAIGSQTCGTNEEPNQCHNACFEKKCPVKPQPLV 189
Query: 305 DCSKPKPCEEGCACK 261
+C + C+ GC+CK
Sbjct: 190 NCM--EKCDIGCSCK 202
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 473 CKAXCVCKEGYLKDXXGKCVARENC-PN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCS 297
C CVC+ Y D G CV +C EC +NEE++ C + C+ + +
Sbjct: 647 CTPGCVCRPNYKLDSNGDCVHNRHCFKTTECP-DNEEWSKCLS--NDNQCDLASISMIAN 703
Query: 296 KPKPCEEGCAC 264
K + C GC C
Sbjct: 704 KDQ-CFSGCVC 713
Score = 34.7 bits (76), Expect = 0.038
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 479 KSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGEN 372
+ C C CK+G+L++ G+CV CP + EN
Sbjct: 193 EKCDIGCSCKKGFLRNRQGQCVNPTECPATGSTDEN 228
Score = 32.7 bits (71), Expect = 0.15
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 485 DQKSCKAXCVCKEGYLKDXXGKCVARENC 399
++ C + CVC +G+ ++ G CVA + C
Sbjct: 703 NKDQCFSGCVCADGFARNNNGTCVASDKC 731
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = -3
Query: 497 CPXVDQKSCKAXCVCKEGYLKDXXGKCVARENCP-----N*ECSGENEEFTNCTNPXPPR 333
CP KSCK C+C G++K GKCV +CP N C G +E+T+C P +
Sbjct: 639 CPGPKNKSCKRACICAPGFVK-KNGKCVTLASCPDHDHTNITCLG-TQEYTDCM-PKCQQ 695
Query: 332 TCNSLVARIDCSKPKPCEEGCACKPD 255
C+ + C GC C+P+
Sbjct: 696 LCSGAQQCETGMEIAMCTPGCVCRPN 721
Score = 48.8 bits (111), Expect = 2e-06
Identities = 26/74 (35%), Positives = 34/74 (45%)
Frame = -3
Query: 479 KSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDC 300
K C C C GYL+ G+C ++CP EC G+NEE+ C TC +
Sbjct: 587 KHCGQGCACASGYLRSSDGECYKPKDCPP-EC-GQNEEY-RCEK--CAGTCKNPEPNCPG 641
Query: 299 SKPKPCEEGCACKP 258
K K C+ C C P
Sbjct: 642 PKNKSCKRACICAP 655
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SCKAXCVCKEGYLKDXXGKCVARENCP--N*ECSGENEEFTNCTNPXPPRTCN-SLVARI 306
+C+ C C +G++++ G CV CP + G NEE C N + C +
Sbjct: 130 ACQVGCSCMDGFVRNNQGVCVKEAECPAIGSQTCGTNEEPNQCHNACFEKKCPVKPQPLV 189
Query: 305 DCSKPKPCEEGCACK 261
+C + C+ GC+CK
Sbjct: 190 NCM--EKCDIGCSCK 202
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = -3
Query: 479 KSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDC 300
+ C C CK+G+L++ G+CV CP +G C+ P C++ + C
Sbjct: 193 EKCDIGCSCKKGFLRNRQGQCVNPTECP---ATGST---LTCSKNEEPNDCHNSCSEAKC 246
Query: 299 S-KPKP-------CEEGCACK 261
P+P CE+ C+CK
Sbjct: 247 PVNPQPFVRCMMRCEKACSCK 267
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -3
Query: 473 CKAXCVCKEGYLKDXXGKCVARENC-PN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCS 297
C CVC+ Y D G CV +C EC +NEE++ C + C+ + +
Sbjct: 712 CTPGCVCRPNYKLDSNGDCVHNRHCFKTTECP-DNEEWSKCLS--NDNQCDLASISMIAN 768
Query: 296 KPKPCEEGCAC 264
K + C GC C
Sbjct: 769 KDQ-CFSGCVC 778
Score = 32.7 bits (71), Expect = 0.15
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 473 CKAXCVCKEGYLKDXXGKCVARENCPN*ECSGEN 372
C+ C CK+G +++ G+CV CP + EN
Sbjct: 260 CEKACSCKKGLVRNRQGQCVKLAECPPTGSTDEN 293
Score = 32.7 bits (71), Expect = 0.15
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 485 DQKSCKAXCVCKEGYLKDXXGKCVARENC 399
++ C + CVC +G+ ++ G CVA + C
Sbjct: 768 NKDQCFSGCVCADGFARNNNGTCVASDKC 796
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 44.8 bits (101), Expect = 4e-05
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -3
Query: 476 SCKAXCVCKEGYLKDXXGKCVARENCP--N*ECSGENEEFTNCTNPXPPRTCN-SLVARI 306
+C+ C C +G++++ G CV CP + G NEE C N + C +
Sbjct: 130 ACQVGCSCMDGFVRNNQGVCVKEAECPAIGSQTCGTNEEPNQCHNACFEKKCPVKPQPLV 189
Query: 305 DCSKPKPCEEGCACK 261
+C + C+ GC+CK
Sbjct: 190 NCM--EKCDIGCSCK 202
Score = 35.5 bits (78), Expect = 0.022
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENC 399
CVC+EG+ +D GKCV + +C
Sbjct: 509 CVCQEGFFRDNSGKCVTQNDC 529
Score = 33.9 bits (74), Expect = 0.066
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 479 KSCKAXCVCKEGYLKDXXGKCVARENCP 396
+ C C CK+G+L++ G+CV CP
Sbjct: 193 EKCDIGCSCKKGFLRNRQGQCVNPTECP 220
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPC 282
C C +G+ +C+ R C N +C E C + C+ + +I CS KPC
Sbjct: 193 CSCADGFNGTRCEQCLPRAGCVNGDCVNETPNTCKCRDGFIGDRCD-IDIKI-CSLEKPC 250
Query: 281 EEGCACKPDT*NST 240
G C D+ +ST
Sbjct: 251 ANGGICSIDSSSST 264
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPC 282
C C +G+ +C+ R C N +C E C + C+ + +I CS KPC
Sbjct: 193 CSCADGFNGTRCEQCLPRAGCVNGDCVNETPNTCKCRDGFIGDRCD-IDIKI-CSLEKPC 250
Query: 281 EEGCACKPDT*NST 240
G C D+ +ST
Sbjct: 251 ANGGICSIDSSSST 264
>U50311-8|AAA92312.1| 145|Caenorhabditis elegans Hypothetical
protein C25E10.7 protein.
Length = 145
Score = 38.3 bits (85), Expect = 0.003
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = -3
Query: 494 PXVDQKSCKAX-CVCKEGYLKDXXGKCVARENCPN*ECS--GENEEFTNCTNPXPPRTCN 324
P V CK CVCK+GY+++ CV R C E S E+E F C P TC+
Sbjct: 39 PTVCSLECKPNACVCKDGYVRNTKNDCVRRLECTA-ETSRCPEDEVFQTCGTLCQP-TCD 96
Query: 323 SLVARIDCSKPKPCEEGCACKP 258
C + C C P
Sbjct: 97 DPYP-TSCEHDRCIRNVCRCLP 117
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 473 CKAXCVCKEGYL----KDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARI 306
C + CVC++ Y+ D +CV C C +EF C + P C++ +
Sbjct: 594 CFSGCVCRQPYVLLHPNDPTSRCVLPAECDR-GCEDPTKEFMTCGSSCP-MGCDNRHPK- 650
Query: 305 DCSKPKPCEEGCACK 261
+C+ PC+ GC CK
Sbjct: 651 NCA---PCQTGCFCK 662
Score = 30.7 bits (66), Expect = 0.61
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Frame = -3
Query: 494 PXVDQKSCKAXCVCKEGYLK---DXXGKCVARENCP----N*ECSGENEEFTNCTNPXPP 336
P C+ C+C GY++ CV R C C+ E ++ C + P
Sbjct: 314 PACPAPGCQPGCICLPGYIRRDSSPRSACVPRGLCQAYDLTIRCADEKRQYQTCGSACPI 373
Query: 335 RTCNSLVARIDCSKPKPCEEGCACK 261
R C+ + C GC CK
Sbjct: 374 SCATRNQPR--CN--ERCVTGCFCK 394
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -3
Query: 473 CKAXCVCKEGYLKDXXG-----KCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVAR 309
C+ C CK G + + KC+ E CP E + E T T +++A
Sbjct: 655 CQTGCFCKNGLVFENSATWHTSKCIKIEECPPEEETTTEESTTTTTTEASVPPATTVIAE 714
Query: 308 IDCSKPKP 285
+ ++ +P
Sbjct: 715 VHETRGRP 722
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -3
Query: 473 CKAXCVCKEGYL----KDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARI 306
C + CVC++ Y+ D +CV C C +EF C + P C++ +
Sbjct: 385 CFSGCVCRQPYVLLHPNDPTSRCVLPAECDR-GCEDPTKEFMTCGSSCP-MGCDNRHPK- 441
Query: 305 DCSKPKPCEEGCACK 261
+C+ PC+ GC CK
Sbjct: 442 NCA---PCQTGCFCK 453
Score = 30.7 bits (66), Expect = 0.61
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 7/85 (8%)
Frame = -3
Query: 494 PXVDQKSCKAXCVCKEGYLK---DXXGKCVARENCP----N*ECSGENEEFTNCTNPXPP 336
P C+ C+C GY++ CV R C C+ E ++ C + P
Sbjct: 105 PACPAPGCQPGCICLPGYIRRDSSPRSACVPRGLCQAYDLTIRCADEKRQYQTCGSACPI 164
Query: 335 RTCNSLVARIDCSKPKPCEEGCACK 261
R C+ + C GC CK
Sbjct: 165 SCATRNQPR--CN--ERCVTGCFCK 185
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Frame = -3
Query: 473 CKAXCVCKEGYLKDXXG-----KCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVAR 309
C+ C CK G + + KC+ E CP E + E T T +++A
Sbjct: 446 CQTGCFCKNGLVFENSATWHTSKCIKIEECPPEEETTTEESTTTTTTEASVPPATTVIAE 505
Query: 308 IDCSKPKP 285
+ ++ +P
Sbjct: 506 VHETRGRP 513
>U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical
protein C25E10.8 protein.
Length = 137
Score = 35.9 bits (79), Expect = 0.016
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECS--GENEEFTNCTNPXPPRTCNSLVARIDCSKPK 288
C CK+G++++ GKCV C E S ENE F C P TC P+
Sbjct: 55 CDCKKGFVRNSLGKCVDISTCTK-ETSKCPENETFFRCGTACEP-TCEK-------PGPR 105
Query: 287 PCEEGC 270
PC C
Sbjct: 106 PCTRQC 111
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 35.5 bits (78), Expect = 0.022
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENC 399
CVC+EG+ +D GKCV + +C
Sbjct: 404 CVCQEGFFRDNSGKCVTQNDC 424
Score = 32.7 bits (71), Expect = 0.15
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 476 SCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGEN 372
+C+ C C +G++++ G CV CP + EN
Sbjct: 130 ACQVGCSCMDGFVRNNQGVCVKEAECPAIGSTDEN 164
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 34.7 bits (76), Expect = 0.038
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 14/93 (15%)
Frame = -3
Query: 494 PXVDQKSCKAXCVCKEGYLKDXXGKCVARENCP-----N*ECSGENEEFTNCTNPXPPRT 330
P ++ +C + C C GY++ G C CP C+G E +T C P +T
Sbjct: 408 PCMNSTTCTSGCACIRGYVR-INGVCELMSKCPVTVTEGVSCAGA-EVYTACM-PECEKT 464
Query: 329 CNSLVARI---------DCSKPKPCEEGCACKP 258
C+ + + P C GC C+P
Sbjct: 465 CSGVPNQFCIEAKNGTATTKAPAKCLPGCTCRP 497
Score = 31.1 bits (67), Expect = 0.46
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = -3
Query: 422 KCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPCEEGCAC 264
+C+ + P +C G NEEF+ C + TC C C GCAC
Sbjct: 374 QCIQLKQAP--KCVGANEEFSACKSGC-EGTCEE--PSPPCMNSTTCTSGCAC 421
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 479 KSCKAXCVCKEGYLKDXXGKCVARENC 399
K+C + C C +G+ + G CV C
Sbjct: 545 KACWSGCGCLDGFSRSTTGLCVETAKC 571
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPC 282
C+CK+GY D +C C N + G N + CTN C L ++ C
Sbjct: 472 CLCKDGYEGDPSSECRDVNECKNPDACGPNSQ---CTNTQGGYECECLAGFERIAEGAHC 528
Query: 281 --EEGCACKP 258
+ CA +P
Sbjct: 529 TDRDECAVEP 538
>U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical
protein K05F1.10 protein.
Length = 140
Score = 33.5 bits (73), Expect = 0.087
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN 393
CVC +GY++ G C+ +CPN
Sbjct: 95 CVCNDGYVRSEKGICIRPSHCPN 117
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = -3
Query: 461 CVCKEGYLK--DXXGKCVARENC----PN*ECSGENEEFTNCTNPXPPRTCNSLVARIDC 300
C+CKEG+++ + CV + C N E N + C P TC ++ C
Sbjct: 361 CICKEGFVRMANDEDVCVPFDFCDKTVENEETCEANSTWAKCGTACEP-TCANMYDTAPC 419
Query: 299 SKPKPCEE-GCAC 264
P CE+ GC C
Sbjct: 420 --PASCEKPGCTC 430
Score = 32.3 bits (70), Expect = 0.20
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 467 AXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRT 330
A C C +GY ++ G+CV +CP + + T T P P +T
Sbjct: 526 AACACLQGYARNPQGQCVYWGDCPT-DVQPTTLKSTAPTTPVPTQT 570
>U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform b
protein.
Length = 86
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECS-GENEEFTNC 354
C CK+G++++ GKCV C ENE F C
Sbjct: 4 CDCKDGFVRNSLGKCVEVSECTKETTKCPENETFFGC 40
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENCPN*ECS-GENEEFTNC 354
C CK+G++++ GKCV C ENE F C
Sbjct: 53 CDCKDGFVRNSLGKCVEVSECTKETTKCPENETFFGC 89
>Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical
protein F53C11.9 protein.
Length = 80
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 473 CKAXCVCKEGYLKD-XXGKCVARENCP 396
CKA C CK+G++ D KC+ + CP
Sbjct: 51 CKARCECKQGFVVDSNTKKCIDLKKCP 77
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 31.9 bits (69), Expect = 0.27
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 380 GENEEFTNCTNPXPPRTCNS--LVARIDCSKPKPCEEGCACKP 258
G NE+++ CT PP TC S R+DC++P C C P
Sbjct: 30 GINEQYSPCTQMCPP-TCESPNPQCRVDCTRP-----SCTCLP 66
>Z81117-4|CAB03319.1| 249|Caenorhabditis elegans Hypothetical
protein T06E6.10 protein.
Length = 249
Score = 31.1 bits (67), Expect = 0.46
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENC 399
CVC G+ +D KCV +E C
Sbjct: 219 CVCLNGFFRDKHDKCVTQEEC 239
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -3
Query: 494 PXVDQKSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLV 315
P D+++C+ C + ++ G C + N N ECS + C P + C+S
Sbjct: 82 PRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECSALCQMDGEC--PETQKCCSSGC 139
Query: 314 ARIDCSKPK 288
+R C KP+
Sbjct: 140 SR-QCLKPR 147
>Z74031-3|CAA98455.1| 245|Caenorhabditis elegans Hypothetical
protein F32D8.3 protein.
Length = 245
Score = 30.7 bits (66), Expect = 0.61
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 473 CKAXCVCKEGYLKDXXGKCVARENCP 396
C+ C C+ G++++ CV E CP
Sbjct: 88 CEPGCTCRNGFVRNSLKLCVLPEECP 113
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -3
Query: 485 DQKSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARI 306
D+++C+ C + ++ G C + N N ECS + C P + C+S +R
Sbjct: 85 DRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECSALCQMDGEC--PETQKCCSSGCSR- 141
Query: 305 DCSKPK 288
C KP+
Sbjct: 142 QCLKPR 147
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -3
Query: 485 DQKSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARI 306
D+++C+ C + ++ G C + N N ECS + C P + C+S +R
Sbjct: 85 DRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECSALCQMDGEC--PETQKCCSSGCSR- 141
Query: 305 DCSKPK 288
C KP+
Sbjct: 142 QCLKPR 147
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKC----VARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSK 294
C+CKEG+ D +C NC C G C CN C K
Sbjct: 583 CLCKEGFAGDKCDRCDIAFYGYPNCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDK 642
Query: 293 PKPCEEGCACKPD 255
C G PD
Sbjct: 643 ---CAAGFYNYPD 652
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKC----VARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSK 294
C+CKEG+ D +C NC C G C CN C K
Sbjct: 583 CLCKEGFAGDKCDRCDIAFYGYPNCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDK 642
Query: 293 PKPCEEGCACKPD 255
C G PD
Sbjct: 643 ---CAAGFYNYPD 652
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 9/87 (10%)
Frame = -3
Query: 497 CPXVDQKSCKAXCVCKEGYLKDXXGKCVARENCPN*ECSGENEEFTNCTNPXPPRTC--- 327
C + C+C G+ D + + ++ CP G + + T P P TC
Sbjct: 1810 CSYANSNRSLPHCICPSGFTGDHCEEYLCKDACP----FGSKCTY-DITKPMDPITCSCE 1864
Query: 326 -NSLVARIDCS-----KPKPCEEGCAC 264
N+ DCS +P C G C
Sbjct: 1865 QNAAAHNTDCSPICQKQPNWCHNGGRC 1891
Score = 26.6 bits (56), Expect = 10.0
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Frame = -3
Query: 485 DQKSCKAXCVCKEGYLKDXXGKCVARENCPN--*ECSGENEEFTNCTNPXPPRTCNS--- 321
D K C VC+ GY G C+ + N +C+ +E +NCT C S
Sbjct: 6 DTKYCSTR-VCRPGYFNCGNGLCIPEQKVCNRINDCANFADE-SNCTCNENEFRCQSGAC 63
Query: 320 LVARIDCSKPKPCEE 276
+ ++ C+ + C +
Sbjct: 64 IPSKARCNHMQDCND 78
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKC----VARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSK 294
C+CKEG+ D +C NC C G C CN C K
Sbjct: 583 CLCKEGFAGDKCDRCDIAFYGYPNCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDK 642
Query: 293 PKPCEEGCACKPD 255
C G PD
Sbjct: 643 ---CAAGFYNYPD 652
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKC----VARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSK 294
C+CKEG+ D +C NC C G C CN C K
Sbjct: 583 CLCKEGFAGDKCDRCDIAFYGYPNCKACACDGAGITSPECDATSGQCPCNGNFTGRTCDK 642
Query: 293 PKPCEEGCACKPD 255
C G PD
Sbjct: 643 ---CAAGFYNYPD 652
>Z77662-3|CAB01194.1| 284|Caenorhabditis elegans Hypothetical
protein F47B8.3 protein.
Length = 284
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = -1
Query: 430 IXVNVSPEKIAQIRNVQAKMRSLPTARTHXRRXLAIHSSLVLIVVNPNPAKRDALANQTL 251
I V V +I +RNV ++ L ++ R+ L LIV+ N +RD + Q +
Sbjct: 70 IIVTVVQNRIEDLRNVASEYIELQNSQLAKRKLDKFDDILNLIVLEINELERDNFSIQKV 129
Query: 250 E 248
E
Sbjct: 130 E 130
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 232 RIVVEFQVSGLQAHPSSQGLGLLQSIRATSELQVRGGHGFV 354
+ V EF G HP+ Q L L ++ +T + + RG HG V
Sbjct: 250 KYVPEFNF-GYPQHPNFQQLDLNNNVTSTGDEERRGKHGHV 289
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Frame = -3
Query: 461 CVCKEGYLKDXXGK---CVARENCPN*EC------SGENEEFTNCTNPXPPRTCNSLVAR 309
C C EGY D K C + C + C SG E C R C +AR
Sbjct: 115 CRCFEGYAGDNGDKDDVCYYAKPCRHGNCVSNVTVSGGFECI--CPKAFGGRRCEKRIAR 172
Query: 308 IDCSKPKPCEEGCAC 264
DCS C+ C
Sbjct: 173 WDCSDEGYCQNKGVC 187
>U53149-1|AAD31546.1| 328|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 16
protein.
Length = 328
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = -3
Query: 422 KCVARENCPN*ECSGENEEFTNCTNPXPPRTCNSLVARIDCSKPKPCEEGCA 267
KC+ + C N +C+ +N++ C N + NS S C CA
Sbjct: 161 KCI--QQCNN-QCASQNQKTNQCANECNNQCANSCSPSSQTSSYSKCVSQCA 209
>Z99942-6|CAI79199.1| 119|Caenorhabditis elegans Hypothetical
protein H13N06.7 protein.
Length = 119
Score = 27.1 bits (57), Expect = 7.6
Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = -3
Query: 437 KDXXGKCVARENCPN*ECSGENEEFTNCTNPX-PPRTCNSLVARIDCSKPKPCEEGCACK 261
K G C N + E + +NC P P R L R S K C+ C+C
Sbjct: 46 KQHIGICFKSSRLENVKSCREADT-SNCAAPEYPTRKWTLLFIRRGSSLFKICKNYCSCT 104
Query: 260 PDT*NSTT 237
T NST+
Sbjct: 105 NATINSTS 112
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = -3
Query: 461 CVCKEGY----LKDXXGKCVARENCPN*ECSGENEEFTNCTN 348
C C GY L GKCV R+ C E S + F C N
Sbjct: 889 CQCDVGYKYVLLDSNVGKCVDRDECE--EKSDYCDSFATCNN 928
Score = 27.1 bits (57), Expect = 7.6
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 482 QKSCKAXCVCKEGYLKDXXGKC 417
+++ + C C +GY+KD G C
Sbjct: 1657 RENAQVYCNCYDGYMKDSLGNC 1678
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.1 bits (57), Expect = 7.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENC 399
C C+ GY K+ G+C+ + C
Sbjct: 183 CECRSGYEKNQYGECIDIDEC 203
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.1 bits (57), Expect = 7.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENC 399
C C+ GY K+ G+C+ + C
Sbjct: 183 CECRSGYEKNQYGECIDIDEC 203
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.1 bits (57), Expect = 7.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 461 CVCKEGYLKDXXGKCVARENC 399
C C+ GY K+ G+C+ + C
Sbjct: 183 CECRSGYEKNQYGECIDIDEC 203
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -3
Query: 341 PPRTCNSLVARIDCSKPKPCEEGCACKPD 255
P C SL C+ P P GC C D
Sbjct: 1447 PSTVCQSLNMNNWCASPIPGVSGCCCNTD 1475
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -3
Query: 341 PPRTCNSLVARIDCSKPKPCEEGCACKPD 255
P C SL C+ P P GC C D
Sbjct: 1447 PSTVCQSLNMNNWCASPIPGVSGCCCNTD 1475
>AL031633-9|CAA21023.1| 636|Caenorhabditis elegans Hypothetical
protein Y39A1A.12 protein.
Length = 636
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 211 FANLNTGRIVVEFQVSGLQAHPSSQGLGLLQSIRATSELQV-RGGHGFV 354
FAN+ ++ +VSG+ S G+L + +TS + + +G HG +
Sbjct: 558 FANIYKNYCIICSEVSGIGPATDSFAYGMLLQLASTSLINLSKGDHGMM 606
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,872,306
Number of Sequences: 27780
Number of extensions: 223335
Number of successful extensions: 716
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 567
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -