Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0271.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   150   1e-36
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   148   4e-36
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   148   4e-36
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   148   4e-36
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   148   4e-36
AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p pro...    31   1.1  
AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-P...    31   1.1  
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD...    30   2.0  
BT029715-1|ABL75772.1|  614|Drosophila melanogaster IP17540p pro...    29   4.6  
BT029676-1|ABL75733.1|  614|Drosophila melanogaster IP17340p pro...    29   4.6  
BT029655-1|ABL75713.1|  614|Drosophila melanogaster IP17240p pro...    29   4.6  
BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p pro...    29   4.6  
AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-P...    29   4.6  
AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-P...    28   6.1  
AY061599-1|AAL29147.1|  350|Drosophila melanogaster SD05291p pro...    28   8.1  
AE014298-2810|AAF48928.1|  350|Drosophila melanogaster CG7635-PA...    28   8.1  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  150 bits (363), Expect = 1e-36
 Identities = 66/81 (81%), Positives = 74/81 (91%)
 Frame = +3

Query: 255 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGXQLRXD 434
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLD 128

Query: 435 FDSGKELLCTVLKSCGEECVI 497
           FDSGK+LLCTVLK+CGEECVI
Sbjct: 129 FDSGKDLLCTVLKACGEECVI 149



 Score =  126 bits (304), Expect = 2e-29
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = +1

Query: 49  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 228
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 229 VGIDIFNGKSMKISVP 276
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  148 bits (359), Expect = 4e-36
 Identities = 65/81 (80%), Positives = 74/81 (91%)
 Frame = +3

Query: 255 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGXQLRXD 434
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 435 FDSGKELLCTVLKSCGEECVI 497
           FDSGK+LLCTVLK+CGEECVI
Sbjct: 129 FDSGKDLLCTVLKACGEECVI 149



 Score =  123 bits (296), Expect = 2e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +1

Query: 49  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 228
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 229 VGIDIFNGKSMKISVP 276
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  148 bits (359), Expect = 4e-36
 Identities = 65/81 (80%), Positives = 74/81 (91%)
 Frame = +3

Query: 255 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGXQLRXD 434
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 435 FDSGKELLCTVLKSCGEECVI 497
           FDSGK+LLCTVLK+CGEECVI
Sbjct: 129 FDSGKDLLCTVLKACGEECVI 149



 Score =  126 bits (304), Expect = 2e-29
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = +1

Query: 49  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 228
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 229 VGIDIFNGKSMKISVP 276
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  148 bits (359), Expect = 4e-36
 Identities = 65/81 (80%), Positives = 74/81 (91%)
 Frame = +3

Query: 255 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGXQLRXD 434
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 435 FDSGKELLCTVLKSCGEECVI 497
           FDSGK+LLCTVLK+CGEECVI
Sbjct: 129 FDSGKDLLCTVLKACGEECVI 149



 Score =  123 bits (296), Expect = 2e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +1

Query: 49  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 228
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 229 VGIDIFNGKSMKISVP 276
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  148 bits (359), Expect = 4e-36
 Identities = 65/81 (80%), Positives = 74/81 (91%)
 Frame = +3

Query: 255 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGXQLRXD 434
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 435 FDSGKELLCTVLKSCGEECVI 497
           FDSGK+LLCTVLK+CGEECVI
Sbjct: 129 FDSGKDLLCTVLKACGEECVI 149



 Score =  123 bits (296), Expect = 2e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +1

Query: 49  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 228
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 229 VGIDIFNGKSMKISVP 276
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 200 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 48
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-PA
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 200 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 48
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
            isoform D protein.
          Length = 3651

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +2

Query: 41   TQQWVTSKTHTSRPETPGPQPPSPCNVRPCVKT 139
            TQ  +T+ T T+  + P P PP PC   P V T
Sbjct: 2438 TQPTITNTTTTNTTKVPPPVPPKPCT--PVVAT 2468


>BT029715-1|ABL75772.1|  614|Drosophila melanogaster IP17540p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +2

Query: 44  QQWVTSKTHTSR---PETPGPQPPSPCN 118
           ++W+   TH+S    P +PGP P SP N
Sbjct: 5   KRWIYRHTHSSSSATPTSPGPPPVSPTN 32


>BT029676-1|ABL75733.1|  614|Drosophila melanogaster IP17340p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +2

Query: 44  QQWVTSKTHTSR---PETPGPQPPSPCN 118
           ++W+   TH+S    P +PGP P SP N
Sbjct: 5   KRWIYRHTHSSSSATPTSPGPPPVSPTN 32


>BT029655-1|ABL75713.1|  614|Drosophila melanogaster IP17240p
           protein.
          Length = 614

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = +2

Query: 44  QQWVTSKTHTSR---PETPGPQPPSPCN 118
           ++W+   TH+S    P +PGP P SP N
Sbjct: 5   KRWIYRHTHSSSSATPTSPGPPPVSPTN 32


>BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 YLHTFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWT 160
           YL+T  ++  + + ++F +  L G+GC     L W+
Sbjct: 253 YLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWS 288


>AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-PA
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -2

Query: 267 YLHTFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWT 160
           YL+T  ++  + + ++F +  L G+GC     L W+
Sbjct: 253 YLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWS 288


>AE014134-2167|AAF53171.1| 1354|Drosophila melanogaster CG17211-PA
           protein.
          Length = 1354

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 20  LTVVKFKTQQWVTSKTHTSRPETPGPQPPSPCNVRP 127
           +T  K  T +  T KT TS+P TP    P P   +P
Sbjct: 678 ITTSKPTTPKPTTPKTTTSKPTTPKITTPKPTTPKP 713


>AY061599-1|AAL29147.1|  350|Drosophila melanogaster SD05291p
           protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 179 STILHGRPFSITKPFLRRAEHCMGKVAEAPESP 81
           STI+   P  +  P+L +  H MG   E  +SP
Sbjct: 299 STIIFPLPMELLTPYLAKYAHLMGPPPELKQSP 331


>AE014298-2810|AAF48928.1|  350|Drosophila melanogaster CG7635-PA
           protein.
          Length = 350

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -3

Query: 179 STILHGRPFSITKPFLRRAEHCMGKVAEAPESP 81
           STI+   P  +  P+L +  H MG   E  +SP
Sbjct: 299 STIIFPLPMELLTPYLAKYAHLMGPPPELKQSP 331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,316,382
Number of Sequences: 53049
Number of extensions: 542223
Number of successful extensions: 1849
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)