Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0270.Seq
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          33   0.005
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.20 
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    26   0.62 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   3.3  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   5.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   5.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   5.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.6  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 33.1 bits (72), Expect = 0.005
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = +2

Query: 137 NKDDTSSGRG-AQGVHRSRKRG*RHTSRMWYRSRSQQRKRSNPARSRREAPSR 292
           +K   S  R  ++ V RSR RG R  SR   +SRS+ + R++ +RSR   P+R
Sbjct: 414 SKSSRSRSRSLSRSVSRSRSRGSRSRSRT-SQSRSRSKTRTSRSRSRTPLPAR 465



 Score = 27.1 bits (57), Expect = 0.35
 Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
 Frame = +2

Query: 128 IRQNKDDTSSGR----GAQGVHRSRKRG*RHTSRMWYRS--RSQQRKRSNPARSR-REAP 286
           +  N+ DT+ G     G +   RSR +    +SR   RS  RS  R RS  +RSR R + 
Sbjct: 385 LNNNEPDTAGGGTVGDGKKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTSQ 444

Query: 287 SRTCAGPYTS 316
           SR+ +   TS
Sbjct: 445 SRSRSKTRTS 454


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.20
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 131  RQNKDDTSSGRGAQGVHRSRKRG*RHTSRMWYRSRSQQRKRS-NPARSRREAPSR 292
            R      S+G    G  RSR R     SR   RSRS+ R RS + +RSR  + SR
Sbjct: 1131 RSRSRSQSAGSRKSG-SRSRSRSGSQASRGSRRSRSRSRSRSGSRSRSRSGSGSR 1184



 Score = 27.1 bits (57), Expect = 0.35
 Identities = 18/47 (38%), Positives = 25/47 (53%)
 Frame = +2

Query: 155  SGRGAQGVHRSRKRG*RHTSRMWYRSRSQQRKRSNPARSRREAPSRT 295
            +G G++   RSR R  R  S     SRS+ R  S  +RSR  + SR+
Sbjct: 1091 AGSGSRSRSRSRSRS-RSRSGSAKGSRSRSRSGSGGSRSRSRSRSRS 1136



 Score = 24.2 bits (50), Expect = 2.5
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 185  SRKRG*RHTSRMWYR-SRSQQRKRSNPARSRREAPSRTCAG 304
            SRK G R  SR   + SR  +R RS  +RSR  + SR+ +G
Sbjct: 1141 SRKSGSRSRSRSGSQASRGSRRSRSR-SRSRSGSRSRSRSG 1180


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 193 ARVETHVPDVVPVQEPAEEALK 258
           A++ TH+PD+ P ++  EE L+
Sbjct: 182 AKMGTHIPDLEPTRKTIEEELR 203


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +3

Query: 147 IRRRVEALRACTALGSEGRDTRPGC 221
           +R+ +EALR C       RD RP C
Sbjct: 101 LRQILEALRYCHENDIIHRDVRPAC 125


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 417 HQHVNGLGRGGG 452
           HQH  G+G GGG
Sbjct: 289 HQHGGGVGGGGG 300


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 417 HQHVNGLGRGGG 452
           HQH  G+G GGG
Sbjct: 289 HQHGGGVGGGGG 300


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 417 HQHVNGLGRGGG 452
           HQH  G+G GGG
Sbjct: 241 HQHGGGVGGGGG 252


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 420  QHVNGLGRGGGRPRSATLFERL 485
            QH    G+  GRP S  +F++L
Sbjct: 2934 QHAITTGKVVGRPESTLIFDKL 2955


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,053
Number of Sequences: 2352
Number of extensions: 7256
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)