Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0269.Seq
         (327 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   5.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   5.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 19  VHFALTXKKYYFYTII*RCLAY 84
           VHF L    +Y+  II  C+ Y
Sbjct: 94  VHFLLCTYYFYYAFIILLCVYY 115


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 139 LWPSRAFFHLLGWLN 95
           LW +  ++H+L  LN
Sbjct: 205 LWHTFGYYHILAMLN 219


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 139 LWPSRAFFHLLGWLN 95
           LW +  ++H+L  LN
Sbjct: 205 LWHTFGYYHILAMLN 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,541
Number of Sequences: 336
Number of extensions: 1194
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6261139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)