Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0269.Seq
         (327 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione S-tran...    22   5.1  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    22   6.8  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         22   6.8  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    21   8.9  

>AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione
           S-transferase D8 protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 12/59 (20%), Positives = 23/59 (38%)
 Frame = +1

Query: 118 RMPEKATDXNSXLVNR*QLSGPNLQLRFFPYSSTACXEDKLXRLAARXXGLXGXLSQCK 294
           ++ E     N  L+N    +GPN+ L  +   ST    + +    ++   +      CK
Sbjct: 130 KLEEALAVLNGYLINNPYAAGPNITLADYSLVSTVTSLEVVQHDLSKYPAISAWYEGCK 188


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +3

Query: 87  NGLLSQPSRW 116
           NG++S+P RW
Sbjct: 31  NGVMSEPERW 40


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -2

Query: 197 RNWRLGPDNCYRFTSXELXSVAFSGILPSAGLAQQT 90
           R W   P +C+      L  +A S  L S+   Q T
Sbjct: 24  RRWPRPPTSCWPSRRSRLCIIALSLTLSSSSCKQST 59


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 50  IFIQSSEDVWHTQW-SVEPAQQMEE 121
           + I    + WHT+W S   +Q+ E+
Sbjct: 138 VVIDGDFNAWHTEWGSARNSQRGED 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,956
Number of Sequences: 2352
Number of extensions: 4086
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)