Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0268.Seq
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   1.5  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 431 VYYLGNTITFFFFPV 387
           V++LG+ + FF FP+
Sbjct: 236 VFFLGSILIFFIFPL 250


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 188 YAFASKTYSIFLTISVRISVF 250
           YA    TYS+F+  ++ ++V+
Sbjct: 245 YARTYSTYSLFMMANITVAVY 265


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 188 YAFASKTYSIFLTISVRISVF 250
           YA    TYS+F+  ++ ++V+
Sbjct: 245 YARTYSTYSLFMMANITVAVY 265


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 188 YAFASKTYSIFLTISVRISVF 250
           YA    TYS+F+  ++ ++V+
Sbjct: 245 YARTYSTYSLFMMANITVAVY 265


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -1

Query: 261 FSLLNTDILTEMVRNIEYVFEAKAYFSLTR 172
           F  L        +  +E  F  K +FS+TR
Sbjct: 326 FGFLIIQRFIHQIGTLEVAFTGKNFFSITR 355


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = +2

Query: 188 YAFASKTYSIFLTISVRISVFNKLNTTWSIPCS 286
           Y+    TYS + T+    +V +     WS+  S
Sbjct: 297 YSAPGPTYSTWSTVQTPTTVMSPTINCWSLTSS 329


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 188 YAFASKTYSIFL 223
           Y + +KTYS+F+
Sbjct: 168 YQYGTKTYSLFI 179


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 188 YAFASKTYSIFL 223
           Y + +KTYS+F+
Sbjct: 168 YQYGTKTYSLFI 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,185
Number of Sequences: 336
Number of extensions: 2234
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)