Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0268.Seq
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    23   4.2  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   7.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   7.4  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        22   9.8  

>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 235 YGDGKEYRICFRSKGIFFLDQACVKVCSRLND 140
           Y     Y +C  ++ +     AC K C+ LND
Sbjct: 26  YAHPYPYDLCGPNEELLECGTACPKTCADLND 57


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 196 KGIFFLDQACVKVCSRLNDDSWKH*TK 116
           +GI+  +   VK+    ++DSWK  T+
Sbjct: 167 RGIWHGESVAVKIFFSRDEDSWKRETE 193


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 27  FHLKHVRGKHNHFRQFFYLGRF 92
           FHL  V   H +FR++ ++  F
Sbjct: 923 FHLSQVLTGHGYFREYLHVCGF 944


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 195 LLRKHIRYSLPSP 233
           LL +HI+Y +P P
Sbjct: 82  LLHEHIKYDVPKP 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,028
Number of Sequences: 2352
Number of extensions: 8977
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)