Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0267.Seq
(548 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 135 6e-31
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 129 5e-29
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 101 8e-21
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 98 1e-19
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 98 1e-19
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 96 4e-19
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 90 3e-17
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 87 2e-16
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 87 2e-16
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 87 3e-16
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 86 6e-16
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 85 1e-15
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 84 2e-15
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 83 3e-15
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 83 4e-15
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 82 1e-14
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 82 1e-14
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 81 2e-14
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 80 3e-14
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 80 4e-14
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 79 5e-14
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 79 7e-14
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 78 2e-13
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 78 2e-13
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 78 2e-13
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 77 3e-13
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 76 5e-13
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 76 6e-13
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 76 6e-13
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 75 8e-13
UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor 4... 75 8e-13
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 75 1e-12
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 75 1e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 75 1e-12
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 74 3e-12
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 74 3e-12
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 74 3e-12
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 73 4e-12
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 73 4e-12
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 73 4e-12
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 4e-12
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 4e-12
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 73 4e-12
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 73 6e-12
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 72 8e-12
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 72 8e-12
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 72 8e-12
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 72 1e-11
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 72 1e-11
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 72 1e-11
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 72 1e-11
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 71 1e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 71 1e-11
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 71 2e-11
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 71 2e-11
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 2e-11
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 71 2e-11
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 71 2e-11
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 71 2e-11
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 71 2e-11
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 71 2e-11
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 70 3e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 70 3e-11
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 70 3e-11
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 70 3e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 70 3e-11
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 70 3e-11
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 70 3e-11
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 70 4e-11
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 70 4e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 70 4e-11
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 70 4e-11
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 70 4e-11
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 70 4e-11
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 70 4e-11
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 70 4e-11
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 69 5e-11
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 69 5e-11
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 69 5e-11
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 69 7e-11
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 69 7e-11
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 7e-11
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 69 7e-11
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 69 7e-11
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 69 7e-11
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 69 9e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 9e-11
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 69 9e-11
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 69 9e-11
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 68 1e-10
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 68 1e-10
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 68 1e-10
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 68 1e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 68 1e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 68 1e-10
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 68 2e-10
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 2e-10
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 68 2e-10
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 67 2e-10
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 67 2e-10
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 67 2e-10
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 67 2e-10
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 67 2e-10
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 67 2e-10
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 67 2e-10
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 67 2e-10
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 67 3e-10
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 67 3e-10
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 67 3e-10
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 66 4e-10
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 66 4e-10
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 66 4e-10
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 66 4e-10
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 66 4e-10
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 66 4e-10
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 66 4e-10
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 66 5e-10
UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=... 66 5e-10
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 66 5e-10
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 66 5e-10
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 66 5e-10
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 66 7e-10
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 66 7e-10
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 66 7e-10
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 66 7e-10
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 7e-10
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 65 9e-10
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 65 9e-10
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 65 9e-10
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 65 9e-10
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 65 9e-10
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 9e-10
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 65 9e-10
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 65 9e-10
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 65 9e-10
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 65 9e-10
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 65 9e-10
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 65 1e-09
UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28; Al... 65 1e-09
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 1e-09
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 65 1e-09
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 65 1e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 65 1e-09
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 65 1e-09
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 65 1e-09
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 65 1e-09
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 64 2e-09
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 64 2e-09
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 64 2e-09
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 64 2e-09
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 64 2e-09
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 64 2e-09
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 2e-09
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 64 2e-09
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 64 2e-09
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 64 2e-09
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 64 3e-09
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 64 3e-09
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 64 3e-09
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 63 4e-09
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 63 4e-09
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 4e-09
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 63 4e-09
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 63 4e-09
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 63 4e-09
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 63 4e-09
UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG4... 63 4e-09
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 4e-09
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 63 4e-09
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 5e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 63 5e-09
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 63 5e-09
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 63 5e-09
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 63 5e-09
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 63 5e-09
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 63 5e-09
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 62 6e-09
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 62 6e-09
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 62 6e-09
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 62 6e-09
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 62 6e-09
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 62 8e-09
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 62 8e-09
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 62 8e-09
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 62 8e-09
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 62 8e-09
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 62 8e-09
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 62 1e-08
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 62 1e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 62 1e-08
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 62 1e-08
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 62 1e-08
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 62 1e-08
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 62 1e-08
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 62 1e-08
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3; Eut... 62 1e-08
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 62 1e-08
UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic... 61 1e-08
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 1e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 61 1e-08
UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH bo... 61 1e-08
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 61 1e-08
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 61 1e-08
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 61 1e-08
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 61 1e-08
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 61 1e-08
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 61 2e-08
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 61 2e-08
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 61 2e-08
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 61 2e-08
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 61 2e-08
UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=... 61 2e-08
UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1; Ery... 61 2e-08
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 61 2e-08
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 61 2e-08
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 61 2e-08
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 3e-08
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 60 3e-08
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 60 3e-08
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 60 3e-08
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 60 3e-08
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 60 3e-08
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 60 3e-08
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 60 3e-08
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 60 3e-08
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 60 3e-08
UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 60 4e-08
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 60 4e-08
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 60 4e-08
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 60 4e-08
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 60 4e-08
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 60 4e-08
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 60 4e-08
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 60 4e-08
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 60 4e-08
UniRef50_A0UX17 Cluster: DEAD/DEAH box helicase-like; n=5; Clost... 60 4e-08
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 60 4e-08
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 60 4e-08
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 60 4e-08
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 60 4e-08
UniRef50_A0T1H5 Cluster: SF2-family helicase; n=6; Plasmodium|Re... 60 4e-08
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 60 4e-08
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 59 6e-08
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 59 6e-08
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 59 6e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 59 6e-08
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 59 6e-08
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 59 6e-08
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 59 8e-08
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 59 8e-08
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 59 8e-08
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 59 8e-08
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 59 8e-08
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 59 8e-08
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 8e-08
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 59 8e-08
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 59 8e-08
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 59 8e-08
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 59 8e-08
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 59 8e-08
UniRef50_Q10RI7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 59 8e-08
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 59 8e-08
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 58 1e-07
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 58 1e-07
UniRef50_Q5D9C4 Cluster: SJCHGC09528 protein; n=1; Schistosoma j... 58 1e-07
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 58 1e-07
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 58 1e-07
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 58 1e-07
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 58 1e-07
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 58 1e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 58 1e-07
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 58 1e-07
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 58 1e-07
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 58 1e-07
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 58 1e-07
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 58 1e-07
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 58 1e-07
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 58 1e-07
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 58 1e-07
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 58 1e-07
UniRef50_UPI0000F2BC8C Cluster: PREDICTED: similar to eukaryotic... 58 2e-07
UniRef50_UPI0000F1F65D Cluster: PREDICTED: hypothetical protein;... 58 2e-07
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 58 2e-07
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 58 2e-07
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 58 2e-07
UniRef50_Q1LSH5 Cluster: DEAD/DEAH box helicase-like protein pre... 58 2e-07
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 58 2e-07
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 58 2e-07
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 58 2e-07
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 58 2e-07
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 58 2e-07
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 57 2e-07
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 57 2e-07
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 57 2e-07
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 57 2e-07
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 57 2e-07
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 2e-07
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 57 2e-07
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 57 2e-07
UniRef50_Q4Y0X7 Cluster: DEAD-box RNA helicase, putative; n=2; P... 57 2e-07
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 57 2e-07
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 57 2e-07
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 57 2e-07
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 57 2e-07
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 57 3e-07
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 57 3e-07
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 57 3e-07
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 57 3e-07
UniRef50_Q4QJG6 Cluster: ATP-dependent RNA helicase, putative; n... 57 3e-07
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 57 3e-07
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 57 3e-07
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 57 3e-07
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 57 3e-07
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 57 3e-07
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 57 3e-07
UniRef50_A7NWH7 Cluster: Chromosome chr5 scaffold_2, whole genom... 56 4e-07
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 56 4e-07
UniRef50_Q58HG3 Cluster: DEAD-box RNA helicase; n=4; Eukaryota|R... 56 4e-07
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 56 4e-07
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 4e-07
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 4e-07
UniRef50_Q6C2D3 Cluster: Yarrowia lipolytica chromosome F of str... 56 4e-07
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 56 4e-07
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 56 4e-07
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 56 5e-07
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 56 5e-07
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 56 5e-07
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 56 5e-07
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 56 5e-07
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 56 5e-07
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 56 5e-07
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 56 5e-07
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 56 5e-07
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 56 5e-07
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 56 5e-07
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 56 5e-07
UniRef50_A2E5C2 Cluster: DEAD/DEAH box helicase family protein; ... 56 5e-07
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 56 5e-07
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 56 5e-07
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 56 5e-07
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 56 5e-07
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 56 7e-07
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 56 7e-07
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 56 7e-07
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 56 7e-07
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 56 7e-07
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 56 7e-07
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 56 7e-07
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 56 7e-07
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 56 7e-07
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 56 7e-07
UniRef50_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA helicase 38;... 56 7e-07
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 56 7e-07
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 55 9e-07
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 55 9e-07
UniRef50_A3J7I3 Cluster: ATP-independent RNA helicase; n=5; Bact... 55 9e-07
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 9e-07
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 55 9e-07
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 55 9e-07
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 55 9e-07
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 55 9e-07
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 55 9e-07
UniRef50_Q6FML5 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 55 9e-07
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 55 9e-07
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 55 9e-07
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 55 9e-07
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 55 9e-07
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 55 9e-07
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 55 1e-06
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 55 1e-06
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 55 1e-06
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 55 1e-06
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 55 1e-06
UniRef50_A7ETZ1 Cluster: Putative uncharacterized protein; n=1; ... 55 1e-06
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 55 1e-06
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 55 1e-06
UniRef50_UPI0000E23613 Cluster: PREDICTED: similar to eukaryotic... 54 2e-06
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 54 2e-06
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 54 2e-06
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 54 2e-06
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 54 2e-06
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 54 2e-06
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 54 2e-06
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 54 2e-06
UniRef50_A6N5Z1 Cluster: Helicase; n=7; Plasmodium|Rep: Helicase... 54 2e-06
UniRef50_Q8NJW1 Cluster: CYT-19 DEAD-box protein precursor; n=1;... 54 2e-06
UniRef50_A6SDG8 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 54 2e-06
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 54 2e-06
UniRef50_Q754U8 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 54 2e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 54 2e-06
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 54 2e-06
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 54 2e-06
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 54 2e-06
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_A4QQK0 Cluster: Putative uncharacterized protein; n=3; ... 54 2e-06
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 54 2e-06
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 54 2e-06
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 54 2e-06
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 54 3e-06
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 54 3e-06
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 54 3e-06
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 54 3e-06
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 54 3e-06
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 54 3e-06
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 54 3e-06
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 54 3e-06
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 54 3e-06
UniRef50_P21372 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 54 3e-06
UniRef50_Q4WRP2 Cluster: ATP-dependent RNA helicase mss116, mito... 54 3e-06
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 54 3e-06
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 54 3e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 54 3e-06
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 53 4e-06
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 4e-06
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 53 4e-06
UniRef50_Q8EPZ1 Cluster: ATP-dependent RNA helicase; n=2; Bacill... 53 4e-06
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 53 4e-06
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 53 4e-06
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 53 4e-06
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 53 4e-06
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 53 4e-06
UniRef50_Q9FQ90 Cluster: Putative chloroplast RNA helicase VDL' ... 53 4e-06
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 53 4e-06
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 53 4e-06
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 53 4e-06
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 53 4e-06
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 53 4e-06
UniRef50_Q1E273 Cluster: Putative uncharacterized protein; n=2; ... 53 4e-06
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 53 4e-06
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 53 4e-06
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 53 5e-06
UniRef50_O54116 Cluster: Probable DEAD-box RNA helicase; n=10; S... 53 5e-06
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 53 5e-06
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 53 5e-06
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 53 5e-06
UniRef50_A3TJG3 Cluster: ATP-dependent RNA helicase; n=5; Actino... 53 5e-06
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 53 5e-06
UniRef50_A7AWJ7 Cluster: DEAD/DEAH box helicase and helicase con... 53 5e-06
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 53 5e-06
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 53 5e-06
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 53 5e-06
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 53 5e-06
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 53 5e-06
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 53 5e-06
UniRef50_UPI000023DE12 Cluster: hypothetical protein FG05108.1; ... 52 7e-06
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 52 7e-06
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 52 7e-06
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 52 7e-06
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 52 7e-06
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 52 9e-06
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 52 9e-06
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 52 9e-06
UniRef50_Q6NHC6 Cluster: Putative RNA helicase; n=2; Corynebacte... 52 9e-06
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 52 9e-06
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 52 9e-06
UniRef50_Q014Y7 Cluster: RNA helicase-like protein; n=2; Ostreoc... 52 9e-06
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 52 9e-06
UniRef50_Q5C221 Cluster: SJCHGC04124 protein; n=1; Schistosoma j... 52 9e-06
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 52 9e-06
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 52 9e-06
UniRef50_Q389T9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 52 9e-06
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 52 9e-06
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 52 9e-06
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 52 9e-06
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 52 9e-06
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 52 1e-05
UniRef50_Q8EUW5 Cluster: ATP-dependent RNA helicase; n=1; Mycopl... 52 1e-05
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 52 1e-05
UniRef50_Q3LW03 Cluster: UB2 probably involved in pre-mRNA splic... 52 1e-05
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 135 bits (327), Expect = 6e-31
Identities = 66/98 (67%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQIQKV+
Sbjct: 62 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVI 121
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLES-GVXVVVGT 546
+ALGD++ A C ACIGGTNV +L++ +VVGT
Sbjct: 122 LALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGT 159
Score = 79.0 bits (186), Expect = 7e-14
Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 NGPSKDQG-SYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
+G S D + GP GMDP G ++++W+++V+ FDDMNLKE LLRGIYAYG EKPSAIQ
Sbjct: 2 SGGSADYNREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQ 60
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 129 bits (311), Expect = 5e-29
Identities = 65/97 (67%), Positives = 76/97 (78%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI I+GRDVIAQ+QSGTGKTATFSIS+LQ +D +RE QALILAPTRELA QIQK +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGL 126
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ALGD++N C ACIGGTNV +L+ G VV GT
Sbjct: 127 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGT 163
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +2
Query: 164 VVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V TFD M L+E+LLRGIYAYG EKPSAIQ
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQ 65
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 101 bits (243), Expect = 8e-21
Identities = 49/97 (50%), Positives = 66/97 (68%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI P I G+DV+AQAQSGTGKT TF+I LQ+ID + R+ Q +ILAP RELA+QI VV
Sbjct: 85 KAIKPIILGKDVLAQAQSGTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVV 144
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+G +LN CIGGT+ + + GV +++ T
Sbjct: 145 KGIGQYLNIEAFCCIGGTSTQETREKCKQGVHIIIAT 181
Score = 52.0 bits (119), Expect = 9e-06
Identities = 21/37 (56%), Positives = 30/37 (81%)
Frame = +2
Query: 143 LDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
L +W + VETF+D+ L ++LLRGI++YG E+PSAIQ
Sbjct: 47 LQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQ 83
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 97.9 bits (233), Expect = 1e-19
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
RAI+PCI+G DVIAQAQSGTGKTATF ISILQ+IDTS++E QALILAPTRELAQQ K+
Sbjct: 59 RAILPCIKGHDVIAQAQSGTGKTATFVISILQRIDTSLKETQALILAPTRELAQQEWKL 117
Score = 80.6 bits (190), Expect = 2e-14
Identities = 35/48 (72%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = +2
Query: 113 DGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
+GP GMDP G ++T+WD VV+ FDDMNLKE LLRG+YAYG EKPSAIQ
Sbjct: 10 NGPEGMDPDGVIETNWDTVVDNFDDMNLKESLLRGVYAYGFEKPSAIQ 57
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 97.9 bits (233), Expect = 1e-19
Identities = 46/68 (67%), Positives = 56/68 (82%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+ I+P +G DVI QAQSGTGKTATF ILQQ++ + +CQAL+LAPTRELAQQI+KV+
Sbjct: 41 KGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQALVLAPTRELAQQIEKVM 100
Query: 436 IALGDHLN 459
ALGDHLN
Sbjct: 101 RALGDHLN 108
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 96.3 bits (229), Expect = 4e-19
Identities = 43/68 (63%), Positives = 57/68 (83%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RA++P IQG DVIAQAQSGTGKT+ F++++ Q +DTS RE QALI +PTRELA Q +KV+
Sbjct: 305 RAVLPIIQGHDVIAQAQSGTGKTSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVI 364
Query: 436 IALGDHLN 459
+A+GD +N
Sbjct: 365 LAIGDSVN 372
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 149 TDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
T+ +++ +FD M +K +LLRGIYAY EKPSA+Q
Sbjct: 269 TEGVELIMSFDQMGIKNDLLRGIYAYSFEKPSAVQ 303
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 90.2 bits (214), Expect = 3e-17
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 420
RAI+PCI+G DVIAQAQSGTGKTATF+ISILQQ++ +E QAL+LAPTRELAQQ
Sbjct: 64 RAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDQKETQALVLAPTRELAQQ 118
Score = 75.8 bits (178), Expect = 6e-13
Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Frame = +2
Query: 92 SKDQGSYDGPPGMDP-GTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
SKD G GP GM+P G ++++W ++ + FDDMNLKE LLRGIYAYG EKPSAIQ
Sbjct: 11 SKDHG---GPDGMEPDGIIESNWTEITDNFDDMNLKESLLRGIYAYGFEKPSAIQ 62
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 87.4 bits (207), Expect = 2e-16
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI+PCI+G DVIAQ+QSGTGKTAT+ I+ LQ+ID + QA+ILAPTRELA QIQKVV
Sbjct: 50 QAIVPCIKGFDVIAQSQSGTGKTATYVIAALQRIDMMKEDTQAIILAPTRELANQIQKVV 109
Query: 436 IA 441
++
Sbjct: 110 LS 111
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +2
Query: 167 VETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V++F+ M L E LLRGI+AYG EKPSAIQ
Sbjct: 20 VDSFEGMMLNENLLRGIFAYGFEKPSAIQ 48
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 87.4 bits (207), Expect = 2e-16
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I P + G+DV+ +AQ+GTGKTA F + L +IDTSI++ Q ++LAPTRELA Q+ +
Sbjct: 43 ALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEA 102
Query: 433 VIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+ + G + A + GG + ++ QLE G VVVGT
Sbjct: 103 IESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQVVVGT 141
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 87.0 bits (206), Expect = 3e-16
Identities = 43/98 (43%), Positives = 61/98 (62%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+AI +QG+DVI QAQ+GTGKTA F + I++++ R QAL+L PTRELA Q+ +
Sbjct: 34 AQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVERLVPGQRAVQALVLTPTRELAIQVAEE 93
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G H A GG ++ + L GV VV+GT
Sbjct: 94 ITKIGRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGT 131
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 85.8 bits (203), Expect = 6e-16
Identities = 43/96 (44%), Positives = 59/96 (61%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI I GRD++A+A++GTGKTA F I L+++ + + QALI+ PTRELA Q +VV
Sbjct: 76 AIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVR 135
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG H C GGTN+ +L V ++VGT
Sbjct: 136 TLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGT 171
Score = 37.1 bits (82), Expect = 0.27
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = +2
Query: 173 TFDDMNLKEELLRGIYAYGXEKPSAIQ 253
TF+D LK ELL GI+ G EKPS IQ
Sbjct: 47 TFEDFYLKRELLMGIFEAGFEKPSPIQ 73
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 84.6 bits (200), Expect = 1e-15
Identities = 46/97 (47%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI ++GRDVI QAQ+GTGKTA F + +LQ+ID + R QAL+L PTRELA Q+ +
Sbjct: 35 AIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQRIDAADRSVQALVLCPTRELALQVANGLT 94
Query: 439 ALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
AL HL + GG + + L G VVVGT
Sbjct: 95 ALAKHLRGVRILSVYGGQPIEPQASALRRGAQVVVGT 131
Score = 32.3 bits (70), Expect = 7.6
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 167 VETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
VE+F D+ L+EELL+ I G +PS IQ
Sbjct: 4 VESFKDLPLEEELLKAIEELGFTEPSPIQ 32
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ-IQKVVI 438
I+P I+G+D IAQAQSGTGKTATFSI+ LQ IDTS QALILAPTRELAQQ I ++
Sbjct: 65 IIPIIKGKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALILAPTRELAQQTITRIFF 124
Query: 439 ALGDHL 456
LG +L
Sbjct: 125 ILGVNL 130
Score = 36.3 bits (80), Expect = 0.47
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+KV++ LG+ L AC GGT+ +L GV VVVGT
Sbjct: 186 KKVIMYLGEFLKVSAYACTGGTDPKEDRKRLREGVQVVVGT 226
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 83.4 bits (197), Expect = 3e-15
Identities = 41/98 (41%), Positives = 61/98 (62%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+AI + GRDV+ Q+Q+GTGKTA FS+ IL+++D + QA++L PTRELA Q+
Sbjct: 31 AQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILERLDPQQKAVQAIVLTPTRELAIQVHDA 90
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + A GG ++ + QL+ GV +VVGT
Sbjct: 91 MAQFVGNSGLRTLAIYGGQSIDRQMLQLKRGVHIVVGT 128
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 83.0 bits (196), Expect = 4e-15
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 AIMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
A++P +G+D+I QAQ+GTGKTA F+I IL +D SI Q L++APTRELA QI +
Sbjct: 30 AVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSNLDCSINRIQHLVIAPTRELANQIYDQL 89
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG + + +GG + + L SGV +VV T
Sbjct: 90 NILGKYTCSKIALILGGVSYEKQKAALNSGVNIVVAT 126
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
ARA P I+G+D+I ++++GTGKTA F + +L++I R +ALIL PTRELA Q+
Sbjct: 57 ARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEKIPADERRVRALILCPTRELALQVADE 116
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L H A GG ++ + LE G ++VGT
Sbjct: 117 LKMLAKHKGLKIAAIYGGASMKQQEDALEEGTPIIVGT 154
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQG-RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
+AI I+G RD++ QAQ+GTGKTA F I IL+ ID S R QALILAPTRELA Q+ +
Sbjct: 31 QAIPILIEGKRDIVGQAQTGTGKTAAFGIPILETIDESSRNTQALILAPTRELAIQVAEE 90
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ ++ GG ++ + +L GV +VVGT
Sbjct: 91 IDSIKGSKRLNVFPVYGGQSIDRQIRELRRGVQIVVGT 128
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 81.0 bits (191), Expect = 2e-14
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI + GRD++A+A++GTGKTA+F I L +I+TS+ QALIL PTRELA Q +V
Sbjct: 65 QAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVC 124
Query: 436 IALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG H+ N GGT + +L+ V ++VGT
Sbjct: 125 KTLGAHIPNLQVMITTGGTTLRDDILRLQQPVHILVGT 162
Score = 37.9 bits (84), Expect = 0.15
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = +2
Query: 101 QGSYDGPPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
QG P + P T D Q F+D L+ ELL GIY G E+PS IQ
Sbjct: 14 QGLAAPPKDLRPQTEDVTATQG-SRFEDFGLRRELLMGIYTAGFERPSPIQ 63
>UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_102,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 395
Score = 80.2 bits (189), Expect = 3e-14
Identities = 39/97 (40%), Positives = 59/97 (60%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RA++P IQGRDV+ Q TGKT S+S+L D S+++ Q LIL TR+L ++ ++
Sbjct: 51 RALVPLIQGRDVVIQNFRSTGKTTVMSLSVLSIFDLSVKKIQVLILQKTRKLTEENAGLI 110
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ALG LN AC G ++ ++ GV +V+GT
Sbjct: 111 MALGKFLNVSIHACSEGNSIQDDISVVQQGVQIVLGT 147
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 164 VVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
+ TF+ M L++ELLRGI A+G +P +Q
Sbjct: 20 IQSTFESMKLRKELLRGINAFGFIRPLEVQ 49
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 79.8 bits (188), Expect = 4e-14
Identities = 43/98 (43%), Positives = 58/98 (59%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+AI + G DVI QAQ+GTGKTA F I +++++ T R QALIL PTRELA Q+
Sbjct: 34 AKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVEKVSTG-RHVQALILTPTRELAIQVSGE 92
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L H GG ++ + L+ GV VV+GT
Sbjct: 93 IQKLSKHKKIRTLPIYGGQSIVHQIKALKQGVQVVIGT 130
>UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4;
Legionella pneumophila|Rep: ATP-dependent RNA helicase -
Legionella pneumophila subsp. pneumophila (strain
Philadelphia 1 /ATCC 33152 / DSM 7513)
Length = 589
Score = 79.4 bits (187), Expect = 5e-14
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+ I +QGRD IA AQ+GTGKTA F++ ILQ + I QALILAPTRELA Q+ +
Sbjct: 34 AQTIPLILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPTRELAIQVAEQ 93
Query: 433 VIALGDH-LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + N GG + QL SG VVVGT
Sbjct: 94 FELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQVVVGT 132
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 79.0 bits (186), Expect = 7e-14
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Frame = +1
Query: 259 AIMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDT--SIRECQALILAPTRELAQQIQK 429
A++P + G+DVI QA++GTGKTA FSI IL+Q+D+ R+ QA+++ PTRELA Q+
Sbjct: 73 ALIPHALNGKDVIGQARTGTGKTAAFSIPILEQLDSLEDCRDPQAIVIVPTRELADQVAA 132
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + GG N+ + QLE+G +VVGT
Sbjct: 133 EAERLARGVPTEIAVLSGGKNMNRQLRQLENGTQLVVGT 171
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQ 426
A +I ++G D+I QAQ+GTGKTA F +I+ D S ++ +ALILAPTRELA Q+
Sbjct: 32 AESIPVALEGHDIIGQAQTGTGKTAAFGCAIINNADFSGKKKSPKALILAPTRELAIQVN 91
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ ++ LG H GG + + L++GV +VVGT
Sbjct: 92 EELVRLGKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGT 131
Score = 33.5 bits (73), Expect = 3.3
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 176 FDDMNLKEELLRGIYAYGXEKPSAIQ 253
FDD+ LKE LL+ I G E+PS IQ
Sbjct: 6 FDDLGLKESLLKAIKDMGFEEPSQIQ 31
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+ I ++GRDV+ QAQ+GTGKTA F++ +L ++D RE Q L+LAPTRELAQQ+
Sbjct: 37 AKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSRLDLQRREPQVLVLAPTRELAQQVAAS 96
Query: 433 VIALGDHLNA-XCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ G + + GG + L G V+VGT
Sbjct: 97 FVQYGRGVKGLEVLSLCGGQEYREQLSGLRRGAQVIVGT 135
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/98 (36%), Positives = 57/98 (58%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I +QG+D+I QAQ+GTGKTA F + +L ++DT Q +++APTRELA Q+ +
Sbjct: 30 AETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDKVDTHKESVQGIVIAPTRELAIQVGEE 89
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G H GG ++ + L+ ++VGT
Sbjct: 90 LYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGT 127
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 77.0 bits (181), Expect = 3e-13
Identities = 38/93 (40%), Positives = 58/93 (62%)
Frame = +1
Query: 268 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 447
P G+DVI ++++GTGKTA F+I IL++I R AL++ PTRELA Q+ + AL
Sbjct: 53 PVRDGKDVIVRSKTGTGKTAAFAIPILERIADGRRRPSALVMCPTRELAIQVAQEFTALA 112
Query: 448 DHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
H + A GG ++ + +LE+G ++VGT
Sbjct: 113 KHRDLSVVAVYGGASMGEQLQKLEAGAEIIVGT 145
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 76.2 bits (179), Expect = 5e-13
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQ 426
+AI P + GRDV+ AQ+GTGKT F+ ILQ++ I R ++LIL PTRELA QIQ
Sbjct: 30 KAIPPALAGRDVLGCAQTGTGKTCAFAAPILQRLGGDIPAGRPIRSLILTPTRELALQIQ 89
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ A G HL GG + +L+ GV ++V T
Sbjct: 90 ESFEAYGKHLPLRSAVIFGGVGQQPQVDKLKKGVDILVAT 129
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 75.8 bits (178), Expect = 6e-13
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
++I ++G+DV+ AQ+GTGKTA F++ +L + +RE Q L+LAPTRELAQQ+ V
Sbjct: 35 QSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLARTQNEVREPQVLVLAPTRELAQQVAMAV 94
Query: 436 IALGDH-LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ H N + GG++ ++ L+ G VVGT
Sbjct: 95 ESYSKHESNVKVASIYGGSDFGSQFRALKQGPQWVVGT 132
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 75.8 bits (178), Expect = 6e-13
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
++GRDV+ AQ+GTGKTA F++ IL ID +R QAL+L PTRELAQQ+ + + G
Sbjct: 44 LEGRDVVGLAQTGTGKTAAFALPILANIDVKVRSPQALVLCPTRELAQQVAEAFRSYGRG 103
Query: 454 LNA-XCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + GG ++ + L G +VV T
Sbjct: 104 MGGLRILSIFGGADMRQQLKSLREGTHIVVAT 135
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 75.4 bits (177), Expect = 8e-13
Identities = 48/97 (49%), Positives = 59/97 (60%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI I+GRDVIAQ+QSGTGKTATFS+S+LQ +D IQ +
Sbjct: 67 RAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLD--------------------IQG-L 105
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ALGD++N C ACIGGTNV +L+ G VV GT
Sbjct: 106 LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGT 142
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +2
Query: 164 VVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V TFD M L+E+LLRGIYAYG EKPSAIQ
Sbjct: 36 VTPTFDTMGLREDLLRGIYAYGFEKPSAIQ 65
>UniRef50_Q0E2Q3 Cluster: Putative eukaryotic initiation factor
4A-2; n=5; Oryza sativa|Rep: Putative eukaryotic
initiation factor 4A-2 - Oryza sativa subsp. japonica
(Rice)
Length = 416
Score = 75.4 bits (177), Expect = 8e-13
Identities = 42/97 (43%), Positives = 55/97 (56%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
R I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT +LA + Q V+
Sbjct: 77 RGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVI 134
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG L+A A GGT+ L +GV V VGT
Sbjct: 135 GVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGT 171
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A AI ++GRD + +AQ+GTGKTA FS+ +L +++ S + QA+++APTRELA Q+
Sbjct: 54 AAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVMAPTRELAIQVAAE 113
Query: 433 VIALGDHLNA-XCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ LG ++ GG ++ + L+SG +VVGT
Sbjct: 114 IKNLGQNIKGLKVLEIYGGASILDQMRALKSGAHIVVGT 152
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 74.9 bits (176), Expect = 1e-12
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I + GRDV+ AQ+G+GKTA FS+ +LQ +D ++ Q L+LAPTRELA Q+ +
Sbjct: 34 AECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEA 93
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ H+ A GG + L G +VVGT
Sbjct: 94 MTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGT 132
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 74.5 bits (175), Expect = 1e-12
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G DV+ +AQ+GTGKTA F+I +L+ ++ R QALI+ PTREL Q+ + + +G +
Sbjct: 39 LDGMDVVGEAQTGTGKTAAFAIPVLENLEAE-RVPQALIICPTRELCLQVSEEIKRIGKY 97
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ A GG ++ + QL GV V+V T
Sbjct: 98 MKVKVLAVYGGQSIGNQIAQLRRGVHVIVAT 128
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 73.7 bits (173), Expect = 3e-12
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ GRD++A+A++GTGK+ + I +L++ID QAL+L PTRELA Q+ ++ I + H
Sbjct: 124 LSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKH 183
Query: 454 L-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L A GGTN+ +L+ V VV+ T
Sbjct: 184 LGGVKVMATTGGTNLRDDIMRLDETVHVVIAT 215
Score = 34.7 bits (76), Expect = 1.4
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 176 FDDMNLKEELLRGIYAYGXEKPSAIQ 253
F+D LK ELL GI+ G EKPS IQ
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQ 116
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE------CQALILAPTRELAQ 417
+AI +QGRDV+A AQ+GTGKTA + + ++Q + RE +ALILAPTRELAQ
Sbjct: 32 QAIPHLLQGRDVLAAAQTGTGKTAAYGLPLIQMLSRQSREETAPKHPRALILAPTRELAQ 91
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q+ + H GGT++ + QL GV +++ T
Sbjct: 92 QVFDNLKQYAQHTELAIVTVYGGTSIRVQQEQLAKGVDILIAT 134
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 73.7 bits (173), Expect = 3e-12
Identities = 41/97 (42%), Positives = 54/97 (55%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI + G D+I QAQ+GTGKTA F + +L ID S + QAL+LAPTRELAQQ+ +
Sbjct: 84 KAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNNIDFSKKCVQALVLAPTRELAQQVGDAL 143
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG++ + L G VVVGT
Sbjct: 144 ATYSGDDGRNVLVVYGGSSYQAQVGGLRRGARVVVGT 180
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 73.7 bits (173), Expect = 3e-12
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA-LGDHL 456
GRD++ QAQ+GTGKTA F++ +L+++++ + Q L+LAPTRELA Q+ A H
Sbjct: 108 GRDLVGQAQTGTGKTAAFALPLLERLESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHP 167
Query: 457 NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ A GGT+ + L GV VVVGT
Sbjct: 168 HLKVLAVYGGTDFRSQISTLRRGVDVVVGT 197
>UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6;
Xanthomonas|Rep: ATP-dependent RNA helicase -
Xanthomonas oryzae pv. oryzae
Length = 482
Score = 72.9 bits (171), Expect = 4e-12
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+++ P ++G DVIAQA +G+GKTA F + +LQ++D ++ QAL+L PTRELA Q+ K
Sbjct: 54 AQSLPPILRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQ 113
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLES-GVXVVVGT 546
+ L + N GG + + LE+ VVVGT
Sbjct: 114 LRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPHVVVGT 153
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 72.9 bits (171), Expect = 4e-12
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQ 417
A+AI + G+DV+A AQ+GTGKTA F++ +LQ++ S + L+L PTRELA+
Sbjct: 29 AKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLVQHGPAVSSNRARVLVLVPTRELAE 88
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q+ + IA G L+ A GG ++ + +L GV V+V T
Sbjct: 89 QVLQSFIAYGKGLDLRFLAAYGGVSINPQMMKLRKGVDVLVAT 131
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 72.9 bits (171), Expect = 4e-12
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKV 432
AI + GRDV+ QAQ+GTGKTA F++ ++ +D + R+ Q L+LAPTRELA Q+ +
Sbjct: 37 AIPYILSGRDVLGQAQTGTGKTAAFALPLINNMDLASRDRAPQVLVLAPTRELAIQVAEQ 96
Query: 433 VIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
A ++ ACI GG + L+ GV VVVGT
Sbjct: 97 FEAFAKNVPNLDVACIYGGQEYGSQIRALKQGVKVVVGT 135
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 72.9 bits (171), Expect = 4e-12
Identities = 38/97 (39%), Positives = 57/97 (58%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI P + RDV+AQAQ+GTGKT F + IL++++ QALI+ PTRELA QI
Sbjct: 32 QAIPPLLAQRDVMAQAQTGTGKTLAFILPILERVNVEKPTIQALIITPTRELAIQITAET 91
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + A GG +V + +L+ + +++GT
Sbjct: 92 KKLAEVKGINILAAYGGQDVEQQLRKLKGSIHIIIGT 128
>UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Desulfuromonadales|Rep: DEAD/DEAH box helicase
domain protein - Geobacter bemidjiensis Bem
Length = 482
Score = 72.9 bits (171), Expect = 4e-12
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Frame = +1
Query: 238 TFCNPA--RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILA 396
T C P +A+ + G+DV QAQ+GTGKTATF ISI ++ + + +ALILA
Sbjct: 22 TQCTPIQEKALPLALTGKDVAGQAQTGTGKTATFLISIFTKLLSQAKTGGEHHPRALILA 81
Query: 397 PTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
PTREL QI+K ALG + A GG + + L++G +V+GT
Sbjct: 82 PTRELVVQIEKDAQALGKYTGFNIQAIYGGVDYMKQRDALKAGADIVIGT 131
>UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4;
Saccharomycetaceae|Rep: ATP-dependent rRNA helicase RRP3
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 504
Score = 72.9 bits (171), Expect = 4e-12
Identities = 39/98 (39%), Positives = 59/98 (60%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A AI +QG+D++ A++G+GKTA F+I ILQ + T+ + AL+LAPTRELA QI++
Sbjct: 126 AAAIPHALQGKDIVGIAETGSGKTAAFAIPILQTLYTAAQPYYALVLAPTRELAFQIKET 185
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + IGG ++ + L V++ T
Sbjct: 186 FDALGSSMGLRSVCIIGGMSMMEQARDLMRKPHVIIAT 223
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 72.5 bits (170), Expect = 6e-12
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQK 429
A+AI P + G DVI AQ+GTGKTA +++ I+Q+ + T + L++APTRELA QI
Sbjct: 29 AQAIPPIMAGHDVIGLAQTGTGKTAAYALPIIQKMLSTPRGRVRTLVIAPTRELACQISD 88
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVV 540
+LG + GG N+ + +L SGV VVV
Sbjct: 89 SFRSLGQRARIRECSIYGGVNMDQQIRRLRSGVDVVV 125
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 72.1 bits (169), Expect = 8e-12
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQ 420
+AI +G D+ A AQ+GTGKTA FS+ ++QQ+ S + +ALI APTRELA+Q
Sbjct: 30 KAIPVARRGHDIFATAQTGTGKTAAFSLPLIQQLLESGKSASRKTARALIFAPTRELAEQ 89
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I + A + N A GG + + LE+GV ++V T
Sbjct: 90 IADNIKAYTKYTNLSVAAIFGGRKMSSQERMLENGVDILVAT 131
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 72.1 bits (169), Expect = 8e-12
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI ++G+DV+ +AQ+GTGKTA F + L +ID S+++ Q L++ PTRELA Q+ + +
Sbjct: 37 QAIPALLEGQDVLGEAQTGTGKTAAFGLPALAKIDASVKQTQVLVVTPTRELAIQVAEAL 96
Query: 436 IALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+ A + GG + L+ G +VVGT
Sbjct: 97 EGFAAKMRGVGVATVYGGAPFGPQVKALKQGTAIVVGT 134
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 72.1 bits (169), Expect = 8e-12
Identities = 38/96 (39%), Positives = 56/96 (58%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI ++G +++ QA +GTGKTA + + +LQ+I ++ Q LI+ PTRELA Q+ V
Sbjct: 32 AIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRG-KKAQVLIVTPTRELALQVADEVA 90
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG +L A GG + + L GV V+VGT
Sbjct: 91 KLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGT 126
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/92 (44%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G+D+I QA++G+GKTA FS+ IL +I+ QALIL PTRELA Q+ + LG
Sbjct: 82 LAGKDIIGQAKTGSGKTAAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRR 141
Query: 454 L-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L A GG + + LE+GV +VVGT
Sbjct: 142 LPGLKVLAMTGGQSGREQADALENGVQIVVGT 173
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 456
+ RD++A AQ+GTGKTA F +LQ ID S + Q LI+APTREL QI + H+
Sbjct: 38 EDRDMVALAQTGTGKTAAFGFPLLQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHI 97
Query: 457 -NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A GG+N+ + ++ G +VV T
Sbjct: 98 KGVRVVAVYGGSNIQEQAREISRGAQIVVAT 128
>UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma
gondii|Rep: DEAD box RNA helicase - Toxoplasma gondii
Length = 479
Score = 71.7 bits (168), Expect = 1e-11
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +1
Query: 262 IMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
++P +QGRD+IA A++G+GKTA F + ILQ++ + ALILAPTREL QI + ++
Sbjct: 81 VLPYALQGRDIIALAETGSGKTAAFGLPILQRLLQRTQRFYALILAPTRELCLQISQQIL 140
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A+G L +GG + + L VVVG+
Sbjct: 141 AMGGTLGVTVVTLVGGLDHNTQAIALAKKPHVVVGS 176
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/98 (37%), Positives = 57/98 (58%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
++AI P ++G D+I AQ+G+GKTA F+I IL ++ A ILAPTRELAQQI++
Sbjct: 109 SKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQEPYYACILAPTRELAQQIKET 168
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+LG + +GG N+ + L +++ T
Sbjct: 169 FDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIAT 206
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 71.3 bits (167), Expect = 1e-11
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 462
D I AQ+GTGKTA F + +L ID + RE QALILAPTRELAQQI + + HL
Sbjct: 53 DFIGLAQTGTGKTAAFGLPLLDLIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKL 112
Query: 463 XCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG N+ + + G ++V T
Sbjct: 113 NVVPVFGGANIMNQIRDIRRGAQIIVAT 140
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/98 (37%), Positives = 57/98 (58%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+ I +Q +DVI QAQ+GTGKTA F I I+++++ QAL++APTRELA Q+ +
Sbjct: 30 AKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEKVNVKNSAVQALVVAPTRELAIQVSEE 89
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G GG ++ + L+ V+VGT
Sbjct: 90 LYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGT 127
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQIQKV 432
+AI ++G D+IA A++G+GKTA + + I+ +++T E ++LI+ PTRELA Q KV
Sbjct: 42 KAIPAILRGNDIIAMARTGSGKTAAYLVPIINRLETHSTEGVRSLIICPTRELALQTIKV 101
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG N IGG+ + ++ L SG ++V T
Sbjct: 102 FNELGKLTNLKASLIIGGSKLSDQFDNLSSGPDIIVAT 139
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+ I ++ +DVI Q+ +G+GKT + + I Q+IDTS RE QA+ILAPT ELA QI K +
Sbjct: 32 KTIPLALENKDVIGQSPTGSGKTLAYLLPIFQKIDTSKREMQAIILAPTHELAMQINKEI 91
Query: 436 IALGDH--LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + ++ IG NV + +L+ V+VG+
Sbjct: 92 QLLSGNSKVSVTSTPIIGNANVKRQIEKLKEKPHVIVGS 130
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/99 (36%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC--QALILAPTRELAQQIQK 429
++I ++G+D++A AQ+GTGKTA F + I+Q + R ALIL PTRELAQQ+
Sbjct: 36 KSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFD 95
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +H + GGT++ + +LE G +++ T
Sbjct: 96 NLTQYAEHTDLRIVCVYGGTSIGVQKNKLEEGADILIAT 134
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+AI + G D+I QAQ+GTGKTA F++ +L +ID + RE Q LILAPTRELA Q+
Sbjct: 51 AQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRIDPARREPQLLILAPTRELALQVATA 110
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L A GG + + L G ++V T
Sbjct: 111 FETYASQLPGVGVVAVYGGAPMGPQLKALRQGAQILVAT 149
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-ECQALILAPTRELAQQIQKV 432
+ I + GRDVI AQ+GTGKTA F + ILQ++ R +A+I+ PTRELA+QIQ V
Sbjct: 30 QVIPHALDGRDVIGIAQTGTGKTAAFVLPILQRLMRGPRGRVRAMIVTPTRELAEQIQGV 89
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVV 540
+ ALG + GG + +L GV + V
Sbjct: 90 IEALGKYTGLRSVTLYGGVGYQGQIQRLRRGVEIAV 125
>UniRef50_A4J5M3 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Clostridiales|Rep: DEAD/DEAH box helicase domain
protein - Desulfotomaculum reducens MI-1
Length = 438
Score = 70.5 bits (165), Expect = 2e-11
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI ++ +D+I Q+Q+G+GKT + + I Q+ID+S RE QALILAPT EL QI K +
Sbjct: 33 AIPLALKNKDIIGQSQTGSGKTLAYLLPIFQKIDSSKRETQALILAPTHELVMQIDKQIK 92
Query: 439 ALGDH--LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + L IG N+ + +L+ ++VG+
Sbjct: 93 TLSSNAGLTINSTVMIGEVNIVRQIEKLKEKPHIIVGS 130
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 70.5 bits (165), Expect = 2e-11
Identities = 43/104 (41%), Positives = 63/104 (60%), Gaps = 6/104 (5%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ--IDTSIRECQ---ALILAPTRELAQ 417
A+A+ + GRD++ A++G+GKTA F+I +LQ + IR AL+LAPTRELAQ
Sbjct: 146 AQAMPIALSGRDLLGCAETGSGKTAAFTIPMLQHCLVQPPIRRGDGPLALVLAPTRELAQ 205
Query: 418 QIQKVVIALGDHLNAXCXA-CIGGTNVP*RYXQLESGVXVVVGT 546
QI+K V A L + +GGTN+ + +L +GV + V T
Sbjct: 206 QIEKEVQAFSRSLESLKNCIVVGGTNIEKQRSELRAGVEIAVAT 249
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 70.5 bits (165), Expect = 2e-11
Identities = 39/98 (39%), Positives = 57/98 (58%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I ++GRD+IA A++G+GKTA+F+I IL Q+ A+IL PTRELA QI +
Sbjct: 32 ANTIPEILKGRDIIASAKTGSGKTASFAIPILNQLSEDPYGVFAVILTPTRELAVQIGEQ 91
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A+G +N C IGG + + L+ ++V T
Sbjct: 92 FNAIGAPMNVNCSVVIGGIDNVTQALILDKRPHIIVAT 129
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 70.5 bits (165), Expect = 2e-11
Identities = 35/98 (35%), Positives = 57/98 (58%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+ I + +DVI QAQ+GTGKTA F I ++++I+ QA+++APTRELA Q+ +
Sbjct: 31 AQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEE 90
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G A GG ++ + L+ ++VGT
Sbjct: 91 LYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGT 128
>UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;
Eukaryota|Rep: ATP-dependent rRNA helicase RRP3 -
Ustilago maydis (Smut fungus)
Length = 551
Score = 70.5 bits (165), Expect = 2e-11
Identities = 40/97 (41%), Positives = 56/97 (57%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI +Q RDVI AQ+G+GKTA F+I ILQ + + + A +LAPTRELA QI + V
Sbjct: 133 KAIPEALQARDVIGLAQTGSGKTAAFTIPILQALWDNPKPFFACVLAPTRELAYQISQQV 192
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + +GG ++ + L V+V T
Sbjct: 193 EALGSTIGVRSATIVGGMDMMSQSIALSKRPHVIVAT 229
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 70.5 bits (165), Expect = 2e-11
Identities = 42/103 (40%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT------SIRECQALILAPTRELAQ 417
+AI ++GRD++A AQ+GTGKTA F++ +LQ + T R +ALIL PTRELA
Sbjct: 30 QAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAA 89
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + V +LN GG ++ + +L GV V+V T
Sbjct: 90 QIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVAT 132
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 70.1 bits (164), Expect = 3e-11
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ-IDTSIRECQALILAPTRELAQQIQK 429
A AI P + GRDV+A A +G+GKTA F + IL Q ID +AL++ PTRELA QI +
Sbjct: 29 ADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQLIDRPRGTTRALVITPTRELAAQILE 88
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L H A GG ++ + GV V++GT
Sbjct: 89 DLNDLAVHTPISAAAVFGGVSIRPQEHAFRRGVDVLIGT 127
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 70.1 bits (164), Expect = 3e-11
Identities = 44/107 (41%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Frame = +1
Query: 241 FCNPA----RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTR 405
F NP +AI P + GRD++A AQ+GTGKT F I L+ + DT Q LIL PTR
Sbjct: 47 FINPTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEMLRDTEPCGVQVLILVPTR 106
Query: 406 ELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ELA Q+ V L +GGT+ + + SG VVV T
Sbjct: 107 ELAMQVHGVYEQLKGKKLKSAALVMGGTSERNQIQSIRSGARVVVAT 153
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G+D+ QAQ+GTGKTA F I ++ +D SI + Q+LIL PTRELA Q+ + L
Sbjct: 38 GKDLTGQAQTGTGKTAAFGIPAIEHVDISINQTQSLILCPTRELALQVCTELKKLSKFKK 97
Query: 460 A-XCXACIGGTNVP*RYXQLESGVXVVVGT 546
A GG ++ + L++G +VVGT
Sbjct: 98 GLRVLAVYGGESIERQIRDLKAGAHIVVGT 127
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 70.1 bits (164), Expect = 3e-11
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQIQK 429
A+ P + GRD++ QA +GTGKTA F++ +L ++ T QAL+L PTRELA Q+ +
Sbjct: 87 AVPPLVAGRDLLGQAATGTGKTAAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSE 146
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ G L A GG + + L GV VVV T
Sbjct: 147 AIHRYGRDLGARVLPVYGGAPIGRQVRALVQGVDVVVAT 185
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQKV 432
AI P + G+D++A AQ+GTGKT F + +Q + T R+ +ALIL PTRELA QI +
Sbjct: 32 AIEPALAGKDIVATAQTGTGKTLAFLLPTIQLLSTEPRQPGVRALILTPTRELALQINEA 91
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
++ + +GG N + + G +VV T
Sbjct: 92 LLQIARGTGIRAAVAVGGLNERSQLRDIRGGANIVVAT 129
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 70.1 bits (164), Expect = 3e-11
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQIQKVVIALGDHLN 459
+D+IAQAQ+GTGKTA F I +L++ID + +A+I+ PTRELA QI + + +L
Sbjct: 57 KDLIAQAQTGTGKTAAFGIPLLERIDFKANKFVKAIIVTPTRELALQIFEELKSLKGTKR 116
Query: 460 AXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG ++ ++ LE GV +VVGT
Sbjct: 117 VKITTLYGGQSLEKQFKDLEKGVDIVVGT 145
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 70.1 bits (164), Expect = 3e-11
Identities = 36/96 (37%), Positives = 60/96 (62%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI + G+D+I A++G+GKTA F+I ILQ++ + +LILAPTREL+ QI++ +I
Sbjct: 71 AIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTRELSLQIKEQLI 130
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+LG + +GG ++ + QL ++VG+
Sbjct: 131 SLGSEIGLDVCLILGGLDMVSQALQLSKKPHIIVGS 166
>UniRef50_UPI0000DAE40A Cluster: hypothetical protein
Rgryl_01000266; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000266 - Rickettsiella
grylli
Length = 433
Score = 69.7 bits (163), Expect = 4e-11
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKV 432
+AI +QGRDV+ AQ+GTGKTA +++ +LQQ+ + + +ALIL+PTR+LA QI
Sbjct: 42 KAIPAILQGRDVVGLAQTGTGKTAAYALPLLQQLTEGPPGQLRALILSPTRDLADQICVA 101
Query: 433 VIALGDHLNAXCXACIGG-TNVP*RYXQLESGVXVVV 540
+ G + C GG N +Y L GV ++V
Sbjct: 102 MNHFGRQTHLRCATIYGGKINYTRQYQLLTGGVDIIV 138
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 69.7 bits (163), Expect = 4e-11
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ GRD++A+A++GTGK+ + I +L+++D QA+++ PTRELA Q+ ++ I + H
Sbjct: 116 LSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKH 175
Query: 454 L-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ A A GGTN+ +L+ VV+ T
Sbjct: 176 MGGAKVMATTGGTNLRDDVMRLDDTGHVVIAT 207
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 69.7 bits (163), Expect = 4e-11
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQ----ALILAPTRE 408
A+ I + G+DV+A AQ+GTGKTA F++ +L ++ +TS+ + ALI+APTRE
Sbjct: 33 AQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYRLQAYANTSVSPARHPVRALIMAPTRE 92
Query: 409 LAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LA QI + V G +L GG N+ + L++GV ++V T
Sbjct: 93 LAMQIDESVRKYGKYLALRTAVVFGGINIEPQIAALQAGVEILVAT 138
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 69.7 bits (163), Expect = 4e-11
Identities = 37/98 (37%), Positives = 60/98 (61%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
+++I +QG+D+IAQAQ+GTGKTA F+I IL ++ + ++ +ALI+ PTRELA QI +
Sbjct: 73 SQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRN-KDIEALIITPTRELAMQISEE 131
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
++ LG GG ++ + LE ++ T
Sbjct: 132 ILKLGRFGRIKTICMYGGQSIKRQCDLLEKKPKAMIAT 169
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 69.7 bits (163), Expect = 4e-11
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 456
QG DVI QA++G+GKTA F + IL++ S + QAL+LAPTRELA Q+ + L +
Sbjct: 41 QGTDVIGQARTGSGKTAAFGLPILERCQPS-GKLQALVLAPTRELANQVAQEFELLQGNA 99
Query: 457 NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GGT++ + L GV ++VGT
Sbjct: 100 GLSIVTVYGGTDLEKQAKTLAKGVDIIVGT 129
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 69.7 bits (163), Expect = 4e-11
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI-----RECQALILAPTRELAQ 417
AR+I ++G D++ AQ+GTGKTA F + IL +I + R C+AL+LAPTRELA
Sbjct: 85 ARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILHRIAANRARPAPRACRALVLAPTRELAT 144
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI G IGG + ++ESGV ++V T
Sbjct: 145 QIADAARTYGKFTRPSVAVVIGGAKPGPQARRMESGVDLLVAT 187
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 69.7 bits (163), Expect = 4e-11
Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 462
R VIAQAQSGTGKT FSI +L +ID S + QAL+LAPTRELA QI V +G +
Sbjct: 131 RHVIAQAQSGTGKTGAFSIGVLSKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPG 190
Query: 463 XCXAC-IGG 486
A IGG
Sbjct: 191 LDIAIFIGG 199
Score = 41.9 bits (94), Expect = 0.009
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 SYDG-PPGMDPGTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
SY+ P D +W V+ FD M+L LL+G+Y+YG PS IQ
Sbjct: 69 SYEAMTPAQDDPNFIPNWTTRVDDFDQMDLPPALLQGVYSYGFRAPSEIQ 118
>UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
eIF4A - Encephalitozoon cuniculi
Length = 425
Score = 69.7 bits (163), Expect = 4e-11
Identities = 42/96 (43%), Positives = 52/96 (54%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI P I GRD+ AQAQSGTGKT F+++ LQ D S Q L+LA TRE+A Q
Sbjct: 68 AIQPIIDGRDIRAQAQSGTGKTGAFAVAALQICDMSQDVTQILVLASTREIAAQNAARFE 127
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG + A GG+ + LE +VVGT
Sbjct: 128 DLGCFMGARVALLSGGSPIAADKVALEKKPHIVVGT 163
Score = 40.7 bits (91), Expect = 0.022
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 146 DTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQHA 259
D+ ++ +T++D LKE+LL+GIY+ G E PS IQ A
Sbjct: 30 DSSQIRMFDTWEDYGLKEDLLKGIYSIGFETPSFIQKA 67
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 69.3 bits (162), Expect = 5e-11
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
ARAI ++G+++ ++ +GTGKTA+F + IL++I+ + R QA+I+APTRELA QI
Sbjct: 29 ARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEKIEPNKRRVQAVIMAPTRELAMQIVNQ 88
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ G + N IGG ++ + +L+ +VVGT
Sbjct: 89 IRIFGSRIENLVIAPLIGGADMRDQIKRLKDS-QIVVGT 126
>UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ATP
dependent RNA helicase - Lentisphaera araneosa HTCC2155
Length = 537
Score = 69.3 bits (162), Expect = 5e-11
Identities = 36/90 (40%), Positives = 53/90 (58%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 456
Q D+I QAQ+GTGKTA F + I+Q+I+ +++ QALIL PTRELA Q+ + + +
Sbjct: 39 QDHDIIGQAQTGTGKTAAFGLPIVQKIEPGLKKPQALILCPTRELAIQVNEEIKSFCKGR 98
Query: 457 NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG + + L+ GV +VV T
Sbjct: 99 GITTVTLYGGAPIMDQKRALKKGVDLVVAT 128
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 69.3 bits (162), Expect = 5e-11
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI + +DV QAQ+GTGKTA F I +L+ ID+ QA+IL PTRELA Q+ + +
Sbjct: 34 AIPQILAHKDVTGQAQTGTGKTAAFGIPLLENIDSEDNNLQAIILCPTRELAIQVAEELR 93
Query: 439 ALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L +L GG + + L+ GV +++GT
Sbjct: 94 KLSVYLPKIDVLPVYGGQPIDRQIKALQKGVQIIIGT 130
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 68.9 bits (161), Expect = 7e-11
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QKV 432
+AI + G+D+I QA++GTGKT F + IL++ID + QALI+APTRELA QI ++
Sbjct: 34 KAIPVILSGKDIIGQAKTGTGKTLAFVLPILEKIDPESSDVQALIVAPTRELALQITTEI 93
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + A GG +V + +L+ +VV T
Sbjct: 94 KKMLVQREDINVLAIYGGQDVAQQLRKLKGNTHIVVAT 131
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 68.9 bits (161), Expect = 7e-11
Identities = 36/102 (35%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQ 420
A+AI ++G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q
Sbjct: 33 AQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLEILSKGENAQSNQVRALVLTPTRELAAQ 92
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + V G HL+ GG + + L G +++ T
Sbjct: 93 VAESVKNYGQHLSLKSTVVFGGVKINPQMMALRRGADILIAT 134
>UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6;
Bacteroidetes|Rep: ATP-dependent RNA helicase -
Polaribacter irgensii 23-P
Length = 447
Score = 68.9 bits (161), Expect = 7e-11
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAX 465
D++A A++GTGKTA F + +LQ ID + QA+ILAPTREL QQI +I+ +H +
Sbjct: 43 DIVALAKTGTGKTAAFGLPLLQLIDVNNDAIQAIILAPTRELGQQIAANLISFAEHTSQV 102
Query: 466 CXACI-GGTNVP*RYXQLESGVXVVVGT 546
A + GG + + +L+ ++V T
Sbjct: 103 SIATLCGGIPIKPQIERLKEATHIIVAT 130
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 68.9 bits (161), Expect = 7e-11
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
++AI+ + G DV+ AQ+GTGKTA FS+ +L +IDT+ + QAL+L PTRELA Q+ +
Sbjct: 33 SQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSRIDTTKNKPQALVLCPTRELAIQVAEA 92
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ N GG ++ + L+ V+VGT
Sbjct: 93 FQTYARGVDNFHVLPIYGGADMRNQLRALKQNPQVIVGT 131
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 68.9 bits (161), Expect = 7e-11
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Frame = +1
Query: 259 AIMP-CIQGRDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQK 429
AI+P ++GRDV+ QA++GTGKTA F I I+++++ + R QALIL PTRELA Q++
Sbjct: 33 AIIPLALEGRDVLGQARTGTGKTAAFGIPIIERLEHGPNSRNPQALILTPTRELAVQVRD 92
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L A GG + + +L+ +VVGT
Sbjct: 93 EIAKLTHGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGT 131
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 68.9 bits (161), Expect = 7e-11
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI QG++++ Q+Q+G+GKTATFSI L ++ + + + +I++PTRELA Q + +
Sbjct: 49 RAIYIISQGKNIMFQSQNGSGKTATFSIGTLARLRLTSKTTELIIVSPTRELAIQTENTL 108
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+LG A AC+GG ++ L+ G+ V GT
Sbjct: 109 KSLG----ANTRACVGGNSLGADVKALQKGIHCVSGT 141
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 68.9 bits (161), Expect = 7e-11
Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQID------TSIREC----QALILAPTREL 411
++P +QGRD+IA+A++GTGKT F I I++++ T+ R + L+LAPTREL
Sbjct: 133 LVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTREL 192
Query: 412 AQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A+Q++K + +L+ C GG + + L GV VVVGT
Sbjct: 193 AKQVEKEIKESAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGT 235
>UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: ATP-dependent RNA helicase -
Oceanobacter sp. RED65
Length = 475
Score = 68.5 bits (160), Expect = 9e-11
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELA 414
A A+ + GRD+I +AQ+GTGKTA F I++LQ++ + E +ALILAPTRELA
Sbjct: 126 AEALPYTLAGRDIIGKAQTGTGKTAAFLITVLQKLLTVKPEERFASEPRALILAPTRELA 185
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESG-VXVVVGT 546
QI K L + + +GG + + QLE+ V VVV T
Sbjct: 186 MQIAKDADGLSKYADLNIVTVLGGVDYDKQKEQLENEVVDVVVAT 230
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 68.5 bits (160), Expect = 9e-11
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I + RDV+ QAQ+GTGKTA+F++ IL +ID QAL+LAPTRELA Q+ +
Sbjct: 35 AATIPLLLNNRDVLGQAQTGTGKTASFALPILARIDIKQTTPQALVLAPTRELAIQVAEA 94
Query: 433 VIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
++ I GG + + L GV VVVGT
Sbjct: 95 FQRYATYIPGFHVLPIYGGQSYGAQLSALRRGVHVVVGT 133
>UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 561
Score = 68.5 bits (160), Expect = 9e-11
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI +
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + C +GG ++ + +L VVV T
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVAT 214
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 68.5 bits (160), Expect = 9e-11
Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I + G DV+ AQ+GTGKTA F+I +L +ID + + QAL+L PTRELA Q+ +
Sbjct: 41 AATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEA 100
Query: 433 VIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
G +L+ I GG++ + L G VVVGT
Sbjct: 101 FGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGAQVVVGT 139
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 68.1 bits (159), Expect = 1e-10
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQI 423
AI ++G D++ AQ+GTGKTA FS+ ILQ + R+ + LIL PTRELA QI
Sbjct: 34 AIPVILEGHDLLGIAQTGTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQI 93
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + A HLN GG + L+ GV +++ T
Sbjct: 94 HENIEAYSKHLNMKHAVIFGGVGQNPQVRALQGGVDILIAT 134
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 68.1 bits (159), Expect = 1e-10
Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQ----QIDTSI----RECQALILAPTRE 408
A+AI + GRDV+ AQ+GTGKTA+FS+ I+Q Q +TS +ALIL PTRE
Sbjct: 39 AKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRE 98
Query: 409 LAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LA Q+ V A H GG ++ + +L GV +++ T
Sbjct: 99 LADQVAANVHAYAKHTPLRSAVVFGGVDMNPQMAELRRGVEILIAT 144
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 3/103 (2%)
Frame = +1
Query: 247 NPARAI-MP-CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQ 420
+P +AI +P + G D++ +AQ+GTGKTA F++ +L ++D +++ Q L+LAPTRELA Q
Sbjct: 68 SPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLDRLDLAVKNPQVLVLAPTRELAIQ 127
Query: 421 IQKVVIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + +L GG ++ + QL G V+VGT
Sbjct: 128 VAEAFQRYAKNLPGFHVLPVYGGQSMVVQLRQLARGAHVIVGT 170
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 456
Q +++IAQ+QSGTGKTATF +++L +ID + CQ L +APTREL QI +V I + +
Sbjct: 86 QPKNLIAQSQSGTGKTATFLLTMLSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFM 145
Query: 457 NAXCXAC-IGGTNVP*RYXQLESGVXVVVGT 546
N C I G + Q+ S +++GT
Sbjct: 146 NNVKITCAIKGLSPDILEGQINS--QIIIGT 174
Score = 37.5 bits (83), Expect = 0.20
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 167 VETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V++F+D+ LK ELL GI + G KPS+IQ
Sbjct: 47 VKSFEDLQLKSELLNGISSMGFRKPSSIQ 75
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 68.1 bits (159), Expect = 1e-10
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A AI + G+DV QAQ+GTGKTA F I I++++D + QAL+L+PTRELA Q +
Sbjct: 33 AMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIERLDPDNKNVQALVLSPTRELAIQTAEE 92
Query: 433 VIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
L + I GG + + L+ V VV+GT
Sbjct: 93 FSRLMKYKKGLNVVPIYGGQPIERQLRALKGTVQVVIGT 131
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 68.1 bits (159), Expect = 1e-10
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A A+ + G+DV QA++G+GKTA F + +LQQID S+ + QAL+L PTRELA Q+
Sbjct: 31 AAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGE 90
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L L N GG + L+ ++V T
Sbjct: 91 LRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHIIVAT 129
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI------RECQALILAPTRELA 414
A AI ++G D++ AQ+GTGKTA F+I ILQ + R+ +AL+LAPTRELA
Sbjct: 29 AEAIPHLLEGLDLLGCAQTGTGKTAAFAIPILQSLAMGQGLLKGKRQIRALVLAPTRELA 88
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + A G +L GG + +LE G+ ++V T
Sbjct: 89 TQIAESFTAYGVNLPLRTLVIFGGVGQAPQTRKLEKGIDILVAT 132
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 67.7 bits (158), Expect = 2e-10
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQ 420
+AI +G DV+A AQ+GTGKTA F++ ILQ++ Q ALIL PTRELA Q
Sbjct: 30 QAIPAIRRGEDVLASAQTGTGKTAAFALPILQKMHERPMTVQHSNARALILTPTRELAAQ 89
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + A H+N GG + + +L+ G ++V T
Sbjct: 90 VADNISAYSKHMNISVLTIYGGMKMATQAQKLKQGADIIVAT 131
>UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;
n=1; Cytophaga hutchinsonii ATCC 33406|Rep: Inducible
ATP-independent RNA helicase - Cytophaga hutchinsonii
(strain ATCC 33406 / NCIMB 9469)
Length = 457
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-N 459
++V+ AQ+GTGKTA F + +LQQI+ S+++ Q L+L PTREL QQ+ K + ++
Sbjct: 40 KNVVGVAQTGTGKTAAFGLPVLQQINPSLQQTQVLVLVPTRELGQQVAKDLFVFSRYIVR 99
Query: 460 AXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A GG + + +LE+ ++V T
Sbjct: 100 IHTEAVYGGKKIEEQIKKLETPKHILVAT 128
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQ 420
A+AI + G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q
Sbjct: 29 AQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQ 88
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + V G +L GG + + +L GV V+V T
Sbjct: 89 VSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVAT 130
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/98 (35%), Positives = 52/98 (53%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A+A+ + GRDV AQ+GTGKTA F++ IL ++ R + L+L PTRELA Q+++
Sbjct: 161 AQAVPAVLAGRDVTGSAQTGTGKTAAFALPILHKLGAHERRLRCLVLEPTRELALQVEEA 220
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + GG + L+ GV VV T
Sbjct: 221 FQKYSKYTDLTATVVYGGVGYGKQREDLQRGVDVVAAT 258
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA-QQIQK 429
A AI P ++ RDV+ AQ+GTGKTA F + +L +D R QAL+LAPTRELA Q Q
Sbjct: 73 AAAIPPLLELRDVVGIAQTGTGKTAAFGLPLLAIVDADERNVQALVLAPTRELAMQSAQA 132
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ GG+ + L+ G VVVGT
Sbjct: 133 IEDFAARTARLDVVPVYGGSPYGPQIGALKRGAQVVVGT 171
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQ 420
A+AI + G+DV+A AQ+GTGKTA F++ +L+ + + + +AL+L PTRELA Q
Sbjct: 29 AQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLSKGNKAKAGQIRALVLTPTRELAAQ 88
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + V G +L GG + + +L GV V+V T
Sbjct: 89 VSESVETYGKYLPLRSAVVFGGVPINPQIQKLRHGVDVLVAT 130
>UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 21a; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21a -
Strongylocentrotus purpuratus
Length = 657
Score = 67.3 bits (157), Expect = 2e-10
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISIL---QQI-DTSIRECQALILAPTRELAQQ 420
A+ P G DVIAQA++GTGKT +F + ++ QQ S R+ L LAPTRELA+Q
Sbjct: 130 AQTFKPIDDGFDVIAQARTGTGKTLSFVLPLVEKWQQFPQKSGRQPIILALAPTRELAKQ 189
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I + A+G HL+ C GGT+ + + G+ VVVGT
Sbjct: 190 ISEYFEAIGPHLSTTC--IYGGTSYWPQESAIRRGLDVVVGT 229
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 67.3 bits (157), Expect = 2e-10
Identities = 32/87 (36%), Positives = 51/87 (58%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAX 465
D I A +GTGKTA F I +++ ID+++++ QAL+L+PTRELA Q+ + + LG
Sbjct: 84 DFIGLASTGTGKTAAFGIPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVR 143
Query: 466 CXACIGGTNVP*RYXQLESGVXVVVGT 546
GG + + ++ G +VV T
Sbjct: 144 VVTIYGGASYRTQIDGIKRGAHIVVAT 170
>UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=1;
Candidatus Protochlamydia amoebophila UWE25|Rep:
Putative ATP-dependent RNA helicase - Protochlamydia
amoebophila (strain UWE25)
Length = 407
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 265 MPCIQGR-DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA 441
+P IQ + D+IA +Q+G+GKTAT +I I +++T + + QALI+ PTRELA Q
Sbjct: 46 IPLIQKKQDLIALSQTGSGKTATCAIPICNRVNTELTDIQALIIVPTRELALQYATETQK 105
Query: 442 LGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+G + A GG + + +L+ GV V+V T
Sbjct: 106 IGKYKGVKAFAIFGGEDSALQQSKLKHGVQVLVAT 140
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQ 417
++AI + +D++ AQ+GTGKTA F++ ++QQ I R +A+IL+PTRELA
Sbjct: 131 SQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQLLMNPIAIKGRSARAIILSPTRELAL 190
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + ++ G L IGG + + L GV ++V T
Sbjct: 191 QIHEAFVSFGKRLPLNFTHAIGGAPIRKQMRDLSKGVDILVAT 233
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR---ECQALILAPTRELAQQIQK 429
A+ P ++G+D++ A +GTGKTA FS+ +LQ+I AL+L PTRELA Q+ +
Sbjct: 66 ALPPLLEGKDLLGIAATGTGKTAAFSLPLLQRITPGAHAPFTASALVLVPTRELAMQVAE 125
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ G L GG + + L+ GV VVV T
Sbjct: 126 AIHRYGQKLGISVVPLYGGQVISQQLRVLKRGVDVVVAT 164
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSIS----ILQQIDTSIRECQALILAPTRELAQQI 423
R ++P IQG+D+IA +++G+GKT F + ++ Q S ++ +ALILAPTRELA+Q+
Sbjct: 30 RTMLPAIQGKDIIASSKTGSGKTFAFLVPAINRLMAQKALSRQDPRALILAPTRELAKQV 89
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
++ LN C +GG N + L ++VGT
Sbjct: 90 FIEAKSMCTGLNLTCSLIVGGENYNDQVKALRRNPHIIVGT 130
>UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n=7;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 803
Score = 67.3 bits (157), Expect = 2e-10
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQK 429
+AI P +QG DV+A A++G+GKTA F I +L + I + L+L+PTREL+ QI +
Sbjct: 51 KAIPPMLQGNDVVAMARTGSGKTAAFLIPMLNTLKAHAKIVGIRGLVLSPTRELSLQILR 110
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
AL L+ A +GG ++ ++ L S VVV T
Sbjct: 111 NGFALNKFLDLRFAALVGGDSMDQQFELLASNPDVVVAT 149
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 67.3 bits (157), Expect = 2e-10
Identities = 41/104 (39%), Positives = 56/104 (53%)
Frame = +1
Query: 235 KTFCNPARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 414
K F AI + GRDV+ QA +GTGKT +SIS+LQ+I Q LI+APTRELA
Sbjct: 24 KAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQEIKEG-GGIQGLIVAPTRELA 82
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + V + A GG ++ + L+ G ++V T
Sbjct: 83 VQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGAEILVAT 126
>UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal; n=1;
Exiguobacterium sibiricum 255-15|Rep: IMP
dehydrogenase/GMP reductase:Helicase,
C-terminal:DEAD/DEAH box helicase, N-terminal -
Exiguobacterium sibiricum 255-15
Length = 450
Score = 66.9 bits (156), Expect = 3e-10
Identities = 35/102 (34%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI--- 423
+R I ++GRD+I Q+Q+GTGKT +F + I+Q ++ ++E QA+I+APTRELA QI
Sbjct: 30 SRIIPAALKGRDIIGQSQTGTGKTLSFLLPIVQNVNPELQEMQAIIVAPTRELAWQIHEE 89
Query: 424 -QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +++ D++ GG + + +++ +V+GT
Sbjct: 90 LKSILVKQPDYIKTSLIT--GGMDRERQIGRVKVSPQIVIGT 129
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 66.9 bits (156), Expect = 3e-10
Identities = 34/87 (39%), Positives = 52/87 (59%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNAX 465
+VI QAQ+GTGKTA F I +++++D + QAL+L PTRELA Q+ + +L +
Sbjct: 42 NVIGQAQTGTGKTAAFGIPLIERLDEKANDVQALVLTPTRELALQVCNEIDSLKGNKRLN 101
Query: 466 CXACIGGTNVP*RYXQLESGVXVVVGT 546
GG ++ + L+ V +VVGT
Sbjct: 102 LLPVYGGVSIGNQIRALKRRVDLVVGT 128
>UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;
n=7; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
36 - Oryza sativa subsp. japonica (Rice)
Length = 501
Score = 66.9 bits (156), Expect = 3e-10
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
R I ++GRDV+ A++G+GKTA F++ IL ++ AL LAPTRELA Q+ +
Sbjct: 106 RCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQF 165
Query: 436 IALGDHLNAXCXACIGG 486
ALG L C A IGG
Sbjct: 166 RALGAPLGLRCLAAIGG 182
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 66.5 bits (155), Expect = 4e-10
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID--TSI-RECQALILAPTRELAQQI 423
A AI +QGRD++ AQ+G+GKTA F I +L ++ TS + +ALIL PTRELAQQ+
Sbjct: 72 AEAIPFALQGRDLLLSAQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQV 131
Query: 424 QKVVIALG-DHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
V D C +GG + L+ GV V+V T
Sbjct: 132 HDSVRTYSKDMRGLFCVPLVGGAPYNGQITALKKGVQVIVAT 173
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQ 420
++AI ++G D++A+AQ+GTGKTA+F++ I++++ + R +AL+LAPTRELA Q
Sbjct: 32 SQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPIDGYRPVRALVLAPTRELAIQ 91
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + G L + GG V + +L+ G ++V T
Sbjct: 92 VADNTLEYGRDLGMRVISVYGGVPVENQIKRLKRGTDILVAT 133
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 66.5 bits (155), Expect = 4e-10
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELA 414
A I + GRDV+A A +G+GKTA F++ +LQ++ + S + + L+L PTRELA
Sbjct: 37 AATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQRLFEAKTAEKSAGQVRCLVLVPTRELA 96
Query: 415 QQIQKVVIALGDHLNA--XCXACIGGTNVP*RYXQLESGVXVVVGT 546
QQ+ ++ H N A GG +V + L +G V+V T
Sbjct: 97 QQVADSFLSYASHFNGQLKIVAAFGGVSVNLQMQSLRAGADVLVAT 142
>UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 387
Score = 66.5 bits (155), Expect = 4e-10
Identities = 35/96 (36%), Positives = 54/96 (56%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI ++G+D+IA++ +GTGKT + I IL +ID + QA+ILAP+ ELA QI + +
Sbjct: 40 AIPLILEGKDLIAESPTGTGKTLAYLIPILHRIDPESKAVQAVILAPSHELAMQIHQTIE 99
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
N IGG N+ + L+ ++V T
Sbjct: 100 KWTKDNNISSEPLIGGANIKRQIENLKKRPQIIVAT 135
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 66.5 bits (155), Expect = 4e-10
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSI--RECQALILAPTRELAQQ 420
+AI P ++GRD++ AQ+GTGKTA F SI L++ D I + C+ L+LAPTREL Q
Sbjct: 31 QAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDRLREADNRIPFKSCRMLVLAPTRELVSQ 90
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I G + +GGT+V +L G +++ T
Sbjct: 91 IAASAKDYGALAGLKVQSIVGGTSVNKDRNKLHRGTDILIAT 132
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 66.5 bits (155), Expect = 4e-10
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A++I + G ++ AQ+GTGKTA F++ +L +ID ++ E Q L+LAPTRELA Q+ +
Sbjct: 52 AQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSRIDANVAEPQILVLAPTRELAIQVAEA 111
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
N GG + + L+ G V+VGT
Sbjct: 112 FTTYASKFRNFHVLPIYGGQDFSPQIRGLKRGAQVIVGT 150
>UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Shewanella oneidensis
Length = 439
Score = 66.5 bits (155), Expect = 4e-10
Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 9/111 (8%)
Frame = +1
Query: 241 FCNPARAI-MPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALIL 393
FC P +A+ +P + Q +D+ QAQ+GTGKT F ++ + +S + + +A+I+
Sbjct: 31 FCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSSSIPEGRQLNQPRAIIM 90
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
APTRELA QI K I L H GG + + L+ GV +++GT
Sbjct: 91 APTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGT 141
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 66.1 bits (154), Expect = 5e-10
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL 456
+ DV+A AQ+GTGKTA F + +LQQID R Q+LIL PTREL QI + ++
Sbjct: 39 ENNDVVALAQTGTGKTAAFGLPLLQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYI 98
Query: 457 NA-XCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ GG+++ + L+ GV ++V T
Sbjct: 99 DGLKVLPVYGGSSIDSQIRSLKRGVHIIVAT 129
>UniRef50_Q188H5 Cluster: Putative ATP-dependent RNA helicase; n=2;
Clostridium difficile|Rep: Putative ATP-dependent RNA
helicase - Clostridium difficile (strain 630)
Length = 381
Score = 66.1 bits (154), Expect = 5e-10
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI--QKVVIALG 447
IQ +D++ +Q+GTGKT + + I ++IDTS RE QALILAPT EL QI Q ++A
Sbjct: 37 IQNKDLLINSQTGTGKTLAYLLPIFEKIDTSKRETQALILAPTHELVMQITNQVELLAKN 96
Query: 448 DHLNAXCXACIGGTNV 495
L+ A IG N+
Sbjct: 97 AELSVTSLALIGEVNI 112
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 66.1 bits (154), Expect = 5e-10
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQ 426
AI + D++A AQ+GTGKTA F++ +LQ++ T ++ ++LI+ PTRELA Q+
Sbjct: 31 AIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQRLAAKQSTKVQGVRSLIVTPTRELAAQVA 90
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
V LN A GG + + QL+ GV V++ T
Sbjct: 91 ISVEIYSTQLNIRSFAVYGGVRIEPQIAQLQEGVDVLIAT 130
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 66.1 bits (154), Expect = 5e-10
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+ I + +D+I QAQ+GTGKTA F + +L +I+ +I Q LILAPTRELA Q+ + V
Sbjct: 41 QCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDKINLNINAPQLLILAPTRELAIQVSEAV 100
Query: 436 IALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+ I GG + + L+ GV +VGT
Sbjct: 101 QTYARGMKGFHVLPIYGGQSYDIQLRPLKRGVHAIVGT 138
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 66.1 bits (154), Expect = 5e-10
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQK 429
R +PCI G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q K
Sbjct: 52 RKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFK 111
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
VV LG C +GG + ++ + +++ T
Sbjct: 112 VVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
>UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 473
Score = 65.7 bits (153), Expect = 7e-10
Identities = 36/98 (36%), Positives = 56/98 (57%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
++AI + G D+IA AQ+G+GKT F++S+L + E + LIL P+RE+AQQI KV
Sbjct: 61 SQAIPASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKK-PEARGLILVPSREMAQQIYKV 119
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L + IGGT + QL+ +++ T
Sbjct: 120 FLELCAEMPVSVCLAIGGTTGSKQANQLKKNPRLIIAT 157
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 65.7 bits (153), Expect = 7e-10
Identities = 31/98 (31%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
R ++P ++G++++ ++++G+GKTA+F+I + + I+ QALI+ PTRELA Q++
Sbjct: 31 REVIPKLLKGQNLVVRSKTGSGKTASFAIPLCENINVDYNNIQALIVVPTRELALQVKDE 90
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G C A G ++ + +L+ V +VV T
Sbjct: 91 ISDIGRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVAT 128
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 65.7 bits (153), Expect = 7e-10
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QK 429
A+++ +QG+DVI QAQ+G+GKT F I L++I+ + QA++L PTRELA+Q+ Q+
Sbjct: 32 AQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIMLCPTRELAEQVAQQ 91
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A D N GG + + L+ ++VGT
Sbjct: 92 CRSAAKDIGNIKVTTLCGGQPMGPQIQSLKHSPHIIVGT 130
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 65.7 bits (153), Expect = 7e-10
Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Frame = +1
Query: 235 KTFCNPARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILA 396
K F + P ++GRD+I +A++GTGKT F I I+ +I R L+LA
Sbjct: 126 KLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRNPLCLVLA 185
Query: 397 PTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
PTRELA+Q++K L+ C GGT + + QL+ GV V VGT
Sbjct: 186 PTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQLDYGVDVAVGT 233
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 65.7 bits (153), Expect = 7e-10
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQA---LILAPTRELAQ 417
A+AI + GRD+I A++G+GKT +F + +L+ I +R LI+ PTRELA
Sbjct: 345 AQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELAL 404
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI K + LN C GG+++ + +L+ G ++VGT
Sbjct: 405 QIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGT 447
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 65.3 bits (152), Expect = 9e-10
Identities = 39/93 (41%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE-CQALILAPTRELAQQIQKVVIALG 447
+QG+D++ AQ+GTGKTA FSI ILQ++ T R+ +AL+L PTRELA QI + A G
Sbjct: 36 LQGKDLLGCAQTGTGKTAAFSIPILQKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG 95
Query: 448 DHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ GG + L SG+ ++V T
Sbjct: 96 RYTGLKHAVIFGGVGQKPQTDALRSGIQILVAT 128
>UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 393
Score = 65.3 bits (152), Expect = 9e-10
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPTRELAQQIQK 429
+AI P ++G+DV+ +Q+G+GKTA F + +LQ++ + +ALIL PTRELA Q
Sbjct: 49 QAIPPLLEGKDVLVGSQTGSGKTAAFVLPMLQKLTEAGPAPGPRALILEPTRELAAQTAA 108
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
V LG L+ GGT+ + + GV ++V T
Sbjct: 109 VCRQLGRRLSLKTRVICGGTSREQQVQSVSDGVDIIVAT 147
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 65.3 bits (152), Expect = 9e-10
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR----ECQALILAPTRELAQQ 420
A I +QG+D++A AQ+GTGKTA F + I++ + + + +L+L PTRELA Q
Sbjct: 52 ALTIPEVLQGKDIMASAQTGTGKTAAFILPIIELLRAEDKPKRYQVHSLVLTPTRELAAQ 111
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
++ A +L A GG ++ + +L+ GV ++V T
Sbjct: 112 VEASAKAYTKYLALRSDAVFGGVSIRPQVKRLQGGVDILVAT 153
>UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n=2;
Bacteria|Rep: Superfamily II DNA and RNA helicases -
Syntrophus aciditrophicus (strain SB)
Length = 572
Score = 65.3 bits (152), Expect = 9e-10
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = +1
Query: 262 IMPCIQGR--DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
I+P + R D++ AQ+GTGKTA F I ++Q DT ++ QAL+L PTREL Q+ +
Sbjct: 32 IIPIVLNRQTDLVGLAQTGTGKTAAFGIPLIQLTDTRLKRTQALVLCPTRELCVQVAGDL 91
Query: 436 IALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+G ++ + GG ++ + +L G VVV T
Sbjct: 92 NLMGRYVQKLKIVPVYGGASIVSQTEELRKGAQVVVAT 129
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 65.3 bits (152), Expect = 9e-10
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+QGRD + QA++GTGKTA F + IL + + ALILAPTRELA QI+ +
Sbjct: 7 LQGRDCLIQAKTGTGKTAAFGLPILNSLKEGEK---ALILAPTRELALQIRDNFRDFARY 63
Query: 454 LNAXCXACIGGTNVP*RYXQLESG-VXVVVGT 546
LN A GGT V L G V VV+GT
Sbjct: 64 LNVRTFAFYGGTKVFGDLKVLRGGKVDVVIGT 95
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 65.3 bits (152), Expect = 9e-10
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQA---LILAPTREL 411
A A P ++GRD++ A++G+GKT F ++I ++ DT + LI+APTREL
Sbjct: 28 AAATAPELEGRDLLVSARTGSGKTVAFGLAIANELLGGEDTFLIRAATPLGLIIAPTREL 87
Query: 412 AQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A Q+ + + L + NA C+GG ++ LE G +VVGT
Sbjct: 88 ALQVARELRWLYANTNAEIATCVGGMDMRDERRALERGAHIVVGT 132
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 65.3 bits (152), Expect = 9e-10
Identities = 35/97 (36%), Positives = 55/97 (56%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
++I + G D++ QAQ+GTGKTA+F I IL ++ QAL+L PTRELA Q+ + +
Sbjct: 33 KSIPIAMAGLDLMGQAQTGTGKTASFGIPILNRVIKG-EGLQALVLCPTRELAVQVTEEI 91
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+L + A GG ++ + L ++VGT
Sbjct: 92 SSLSRRMRIQVLAIYGGQSIELQLRSLRRNPEIIVGT 128
>UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;
Bigelowiella natans|Rep: Translation initiation factor
4A2 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 378
Score = 65.3 bits (152), Expect = 9e-10
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Frame = +1
Query: 241 FCNPARAI--MPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELA 414
+C+ ++I +P ++GRD+I Q+ SGTGKT + I Q+ SI Q LIL PTREL+
Sbjct: 32 YCSKIQSITLIPLLKGRDIIYQSPSGTGKTTCYIIGTSNQLCQSINSPQCLILVPTRELS 91
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI+ V L + +C GG + L+ +VGT
Sbjct: 92 IQIRNVFNVLNIYTKNSITSCHGGRWLGEDLKNLKKNFHGIVGT 135
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 65.3 bits (152), Expect = 9e-10
Identities = 35/97 (36%), Positives = 56/97 (57%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI ++G+D+I QA++GTGKTA F I +++ I + + Q L++ PTRELA Q+ + +
Sbjct: 31 QAIPLAMEGKDLIGQARTGTGKTAAFGIPMVEAIRPTSKGVQGLVVVPTRELAVQVAEEL 90
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+G A GG + + LE +VVGT
Sbjct: 91 TRIGKVRGIRSVAIYGGQDFRSQVKALEELPHIVVGT 127
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 65.3 bits (152), Expect = 9e-10
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Frame = +1
Query: 238 TFCNP--ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI------RECQALIL 393
TF P A+ G+D+IAQA++GTGKT +F+I +++++ + R Q L+L
Sbjct: 207 TFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVL 266
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
APTRELA Q+ K + L+ C GGT ++ ++ +G+ ++VGT
Sbjct: 267 APTRELANQVSKDFSDITKKLSVACF--YGGTPYGGQFERMRNGIDILVGT 315
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 65.3 bits (152), Expect = 9e-10
Identities = 30/69 (43%), Positives = 48/69 (69%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 462
R++I Q+QSGTGKTA F++++L ++D +I QA+ +AP+RELA+QIQ+V+ +G
Sbjct: 188 RNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQV 247
Query: 463 XCXACIGGT 489
I G+
Sbjct: 248 GTFLAIPGS 256
Score = 37.1 bits (82), Expect = 0.27
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 167 VETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V++F ++NL E+L++GI A G +KPS IQ
Sbjct: 147 VQSFKELNLHEDLMKGIIAAGFQKPSKIQ 175
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/56 (55%), Positives = 41/56 (73%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALG 447
G D+I +A+SGTGKTA F I L+ ID I Q +ILAPTRE+A QI++V+ +LG
Sbjct: 61 GFDLIVRAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLG 116
>UniRef50_Q89IS2 Cluster: Cold-shock dead-box protein A; n=28;
Alphaproteobacteria|Rep: Cold-shock dead-box protein A -
Bradyrhizobium japonicum
Length = 650
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ------ALILAPTRELAQQIQKVVIA 441
GRD++ AQ+G+GKT + +++ + + I + ALI+APTRELA Q+Q+ +
Sbjct: 36 GRDLLVSAQTGSGKTLAYGLALAKDLLDGIERFERAGAPLALIVAPTRELALQVQRELAW 95
Query: 442 LGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L +H + +C+GG + +L +G +VVGT
Sbjct: 96 LYEHADGRVVSCVGGMDPRREQRELAAGAHIVVGT 130
>UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacillus cereus group|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 389
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/97 (32%), Positives = 58/97 (59%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI ++G+DVIA++ +GTGKT + + +L +I+ +++ Q ++LAPTREL QI + V
Sbjct: 27 QAIPTILEGQDVIAESPTGTGKTLAYLLPLLHKINPEVKQPQVVVLAPTRELVMQIHEEV 86
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ IGG ++ + +L+ V+VG+
Sbjct: 87 QKFTAGTEISGASLIGGADIKRQVEKLKKHPRVIVGS 123
>UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellular
organisms|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 793
Score = 64.9 bits (151), Expect = 1e-09
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS---IRECQALILAPTRELAQQI 423
A+AI ++G DV+ AQ+GTGKTA+F++ +LQ++ S R ++LIL PTRELA Q+
Sbjct: 319 AQAIPEVLKGHDVLGVAQTGTGKTASFTLPMLQKLAGSRARARMPRSLILEPTRELALQV 378
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ G +L IGG ++ + L GV V++ T
Sbjct: 379 AENFKLYGKYLRLTHALLIGGESMAEQRDVLNRGVDVLIAT 419
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/91 (36%), Positives = 55/91 (60%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G+DVIA++ +GTGKT +++ +L++I + QA+ILAP+REL QI +V+
Sbjct: 39 MDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAPSRELVMQIFQVIQDWKAG 98
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ IGG NV + +L+ ++VGT
Sbjct: 99 SELRAASLIGGANVKKQVEKLKKHPHIIVGT 129
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 64.9 bits (151), Expect = 1e-09
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRELAQ 417
A AI + G D++ AQ+GTGKTA F+I +LQ ++ R+ ++LI+ PTRELA
Sbjct: 110 AEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAI 169
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + A G H GG N + L+ G+ +++ T
Sbjct: 170 QIGESFKAYGRHTGLTSTVIFGGVNQNPQTASLQKGIDILIAT 212
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 64.9 bits (151), Expect = 1e-09
Identities = 40/103 (38%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-----QALILAPTRELAQ 417
A+ I ++GRDV+ AQ+GTGKTA ++ IL Q+ + R+ AL+LAPTRELA
Sbjct: 30 AQTIPAALEGRDVLGCAQTGTGKTAALALPILNQLGKNSRKSIPHHPLALVLAPTRELAI 89
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI A G HL GG + L+ G ++V T
Sbjct: 90 QIGDSFDAYGRHLKLRSVLIYGGVGQGNQVKALKRGAHILVAT 132
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQI--------DTSIRECQALILAPTRELAQ 417
+ P + G+DV+ +A++GTGKT FS+ +++++ R + ++LAPTRELA+
Sbjct: 56 LRPAMDGQDVVGRARTGTGKTLAFSLPVIEKLLSNGRGSGGRGYRNPKCIVLAPTRELAK 115
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q++ + L+ C GGT + + +L GV +VVGT
Sbjct: 116 QVENEIFITAPTLDTAC--VYGGTPIGQQESKLRRGVDIVVGT 156
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 64.9 bits (151), Expect = 1e-09
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQI 423
A+AI + G+D++A A +G+GKTA F + +L+++ D+ R + LIL PTRELA Q
Sbjct: 218 AKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQC 277
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q V+ L N +GG + + +L VV+ T
Sbjct: 278 QSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIAT 318
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 64.9 bits (151), Expect = 1e-09
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 RAIMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQ 426
R MP I G DV+A A++G+GKTA F I +L+++ + + +ALIL+PTR+LA+Q
Sbjct: 56 RKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTL 115
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
K LG + +GG ++ ++ +L G V++ T
Sbjct: 116 KFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIAT 155
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQALILAPTRELAQ 417
A+ I + GRDV+ AQ+GTGKTA+F++ IL +I + + L+L+PTREL+
Sbjct: 44 AQTIPTALTGRDVVGIAQTGTGKTASFALPILHRLLEHRIKPQPKTTRVLVLSPTRELSG 103
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI A G H+ IGG + + L GV V+V T
Sbjct: 104 QILDSFNAYGRHIRLSSTLAIGGVPMGRQVRSLMQGVEVLVAT 146
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI-QK 429
A I I+G DVI QAQ+GTGKT F I I+++I+ I++ Q+LIL PTREL Q+ ++
Sbjct: 31 ALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEKIEPKIQKTQSLILCPTRELTLQVYEE 90
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L + GG + ++ LE+ +++ T
Sbjct: 91 LKKLLRFYQEIRIAVVYGGESYTKQFRALEAKPHLIIAT 129
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQALILAPTRELAQQ 420
RAI + GRD++ AQ+GTGKTA F++ +L + T + R +ALIL+PTRELA Q
Sbjct: 33 RAIPHALAGRDMLGIAQTGTGKTAAFALPLLHHLMTVGGKPTTRTTKALILSPTRELAVQ 92
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I + + L + GG +V + L GV ++V T
Sbjct: 93 IAESIADLSEGTPISHCVVFGGVSVRPQIQALARGVDILVAT 134
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/101 (38%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSI---SILQQIDTSIRECQALILAPTRELAQQI 423
A+AI + GRDV+ AQ+GTGKTA+F++ IL R ++LIL PTRELA Q+
Sbjct: 251 AQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMDILSDRRARARMPRSLILEPTRELALQV 310
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + G +L IGG ++ + L GV V++ T
Sbjct: 311 AENFVKYGQYLKLNHALLIGGESMNDQRDVLSKGVDVLIAT 351
>UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Deltaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 577
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/98 (34%), Positives = 52/98 (53%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A A+ GRD++ Q+++G+GKT F + +L+++D + QAL+L PTRELA Q++
Sbjct: 65 AHALPYLFDGRDLMVQSRTGSGKTGAFLLPLLERLDPAEASTQALVLVPTRELALQVEHE 124
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + A GG + L G VVGT
Sbjct: 125 ARTLFEGTGLRVAAVYGGVGYGKQNDALREGAHFVVGT 162
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 64.1 bits (149), Expect = 2e-09
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI-----RECQALILAPTRELAQ 417
A+AI ++G+D+ AQ+GTGKTA F++ + + T+ R C+ LIL+PTRELA
Sbjct: 34 AQAIPHLLEGKDLCGIAQTGTGKTAAFALPSIHYLATNPQARPQRGCRMLILSPTRELAS 93
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + HL A GG + + L+ G ++V T
Sbjct: 94 QIARACNDYTRHLRMSVNAVFGGVPIGRQMRMLDRGTDILVAT 136
>UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=3; Clostridium perfringens|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family - Clostridium
perfringens (strain ATCC 13124 / NCTC 8237 / Type A)
Length = 405
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI ++G++VI +A++GTGKT + + I+++ID S E QA+IL+PT EL QI V+
Sbjct: 31 KAIPEILKGKNVIGKAETGTGKTLAYLLPIIEKIDDSKNEMQAIILSPTHELGVQINNVL 90
Query: 436 IALGDHLNAXCXA--CIGGTNVP*RYXQLESGVXVVVGT 546
L L + +G N+ + +L++ ++VGT
Sbjct: 91 NDLKRGLGKKITSTTLVGSGNIKRQMEKLKNKPHILVGT 129
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-----ECQALILAPTRELAQQI 423
AI +QG+D++A A++GTGKTA F++ IL+++ + R + + L+L PTRELA Q+
Sbjct: 31 AIPAIMQGKDILAGARTGTGKTAAFALPILEKLSSKERNKKRPQTRVLVLVPTRELANQV 90
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + + L GG + + L+SG+ +VV T
Sbjct: 91 TQNIKSYAKKLPFKTLPVFGGVSSYPQIQALKSGIDIVVAT 131
>UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC08663 protein - Schistosoma
japonicum (Blood fluke)
Length = 193
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
+++IAQ+QSGTGKTATF +++L +I T + CQ L +APTRELA QI+ V
Sbjct: 116 QNMIAQSQSGTGKTATFLLAMLSRIRTDVHYCQCLCMAPTRELALQIESV 165
Score = 39.1 bits (87), Expect = 0.066
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +2
Query: 167 VETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V TF ++NLKE LL+GI A G KPS IQ
Sbjct: 75 VRTFQELNLKEPLLKGIAAMGFYKPSTIQ 103
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 64.1 bits (149), Expect = 2e-09
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 9/112 (8%)
Frame = +1
Query: 238 TFCNPARAI-MP-CIQGRDVIAQAQSGTGKTATFSISILQQ-------IDTSIRECQALI 390
T C P +A+ +P + GRD+ QAQ+GTGKT F + ++ + ++ + + +ALI
Sbjct: 30 TLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALI 89
Query: 391 LAPTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LAPTRELA QI + G +L GG + + L G VV+ T
Sbjct: 90 LAPTRELAIQIYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIAT 141
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 63.7 bits (148), Expect = 3e-09
Identities = 33/97 (34%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI ++G D++ QA +GTGKT F+I I++++ + +AL+L PTRELA Q+++ +
Sbjct: 30 AIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVLTPTRELAIQVKEQIY 89
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLES-GVXVVVGT 546
L + GGT+V L++ V +++GT
Sbjct: 90 MLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGT 126
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 63.7 bits (148), Expect = 3e-09
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQ 420
++AI + GRDV+ AQ+G+GKTA F++ +LQQ+ + R + LIL PTRELA Q
Sbjct: 33 SQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQLANAPTGTPRPTRGLILVPTRELAAQ 92
Query: 421 IQKVVIALGDHLNAXCXACI--GGTNVP*RYXQLESGVXVVVGT 546
+ + + +L + GG ++ + L G +VV T
Sbjct: 93 VGEAIAGFAKYLPQRVKVAVVFGGVSINPQMMNLRGGADIVVAT 136
>UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Victivallis vadensis ATCC BAA-548|Rep: DEAD/DEAH
box helicase domain protein - Victivallis vadensis ATCC
BAA-548
Length = 542
Score = 63.7 bits (148), Expect = 3e-09
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Frame = +1
Query: 241 FCNPARAI-MPCI-QGRDVIAQAQSGTGKTATFSISILQQI-DTSIRE----C-QALILA 396
+C P +A+ +P + +GRD+ +AQ+GTGKTA F +++ ++ + + E C +AL+LA
Sbjct: 147 YCTPIQALTLPALLEGRDLAGKAQTGTGKTAAFLLAVFTRLLNHPLEERKPGCPRALVLA 206
Query: 397 PTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
PTRELA QIQK L GG + + LE V +V+GT
Sbjct: 207 PTRELAMQIQKDAEVLEIFTGLTSVVVFGGMDHEKQRRSLEQPVDLVIGT 256
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 63.7 bits (148), Expect = 3e-09
Identities = 36/96 (37%), Positives = 52/96 (54%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI P ++ + VIA A++G+GKTATF+ ILQ + A++L RELA QI +
Sbjct: 32 AIPPLLRKQHVIANAETGSGKTATFAFPILQDLAKDPFGVFAIVLTANRELAMQISEQFT 91
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G LN +GG + + +LE +VVGT
Sbjct: 92 IFGSSLNLRVSTLVGGVDFNKQLSELERIPHIVVGT 127
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 462
+D+I QA+SGTGKT FS+ L+ ID + Q LILAPTRE+A QIQ + A+G +
Sbjct: 4 QDLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEG 63
Query: 463 -XCXACIGGT 489
IGGT
Sbjct: 64 LRSHVFIGGT 73
>UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=9; Bacteroidales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 427
Score = 63.3 bits (147), Expect = 4e-09
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQI 423
A I P ++GRDVIA AQ+GTGKTA + + IL ++ + + A+I+APTRELAQQI
Sbjct: 29 AATIPPILEGRDVIACAQTGTGKTAAYLLPILDRLSAGEFASDVVNAVIMAPTRELAQQI 88
Query: 424 QKVVIALGDHLNAXCXACIGGTN 492
+ V + A GGT+
Sbjct: 89 DQQVEGFSYFMPVSAVAIYGGTD 111
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 63.3 bits (147), Expect = 4e-09
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFS---ISILQQIDTSIRECQALILAPTRELAQQI 423
A AI P + GRDV+ AQ+GTGKTA+F+ I++L + R ++L+L PTRELA Q+
Sbjct: 39 AGAIPPALAGRDVLGIAQTGTGKTASFTLPMITMLARGRARARMPRSLVLCPTRELAAQV 98
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ H+ IGG + + ++ GV V++ T
Sbjct: 99 AENFDIYAKHVKLTKALLIGGVSFKEQEQAIDKGVDVLIAT 139
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 63.3 bits (147), Expect = 4e-09
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQ 417
A+AI + GRD++ AQ+GTGKTA F++ IL ++ R + L+L+PTRELA
Sbjct: 93 AQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHRLAEDKKPAPRRGFRCLVLSPTRELAT 152
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + G H+ GG + L +GV VVV T
Sbjct: 153 QIAESFRDYGKHMGLTVATIFGGVKYGPQMKALAAGVDVVVAT 195
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 63.3 bits (147), Expect = 4e-09
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G+D+IAQA++GTGKTA F + +L ++ Q LIL PTREL +Q+ K + L
Sbjct: 39 LDGKDLIAQAKTGTGKTAAFGLGVLSKLVLDDYRIQVLILCPTRELCEQVSKAIRDLARM 98
Query: 454 L-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ N + GG + + G +VVGT
Sbjct: 99 MPNIKLLSLGGGMPFRPQMKSVAHGAHIVVGT 130
>UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=1; Pseudoalteromonas tunicata D2|Rep:
ATP-dependent RNA helicase, DEAD box family protein -
Pseudoalteromonas tunicata D2
Length = 416
Score = 63.3 bits (147), Expect = 4e-09
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQ---IDTS---IRECQALILAPTRELAQQIQKVV 435
+ G D A A +GTGKTA + + LQ+ +D S +R +AL L PTRELA Q+++ +
Sbjct: 37 LSGTDTYAIAPTGTGKTAAYLLPTLQELSRVDNSAEQVRPVRALFLVPTRELAVQVEESI 96
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G LN + GG +P + + + G +VV T
Sbjct: 97 AKYGKGLNLRTISVFGGVRIPSQVNRFKRGADIVVAT 133
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 63.3 bits (147), Expect = 4e-09
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 444
++G+D++A AQ+GTGKTA+F++ +L+Q+ + +AL++ PTRELA Q+ +
Sbjct: 57 LEGKDIMACAQTGTGKTASFALPVLEQLSKQPNDKPLLRALVMTPTRELAIQVCANIQKY 116
Query: 445 GDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L A GG N+ + +E GV ++V T
Sbjct: 117 SQFLPLKTLAVYGGANMNPQRKGVEQGVDILVAT 150
>UniRef50_P75172 Cluster: Probable ATP-dependent RNA helicase MG425
homolog; n=4; Mycoplasma|Rep: Probable ATP-dependent RNA
helicase MG425 homolog - Mycoplasma pneumoniae
Length = 450
Score = 63.3 bits (147), Expect = 4e-09
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQKV 432
AI +Q +++I + +GTGKTA F I +++ + S Q L++APTRELA+QI+
Sbjct: 33 AIPQFLQHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTT 92
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I H + + IGG + + QLE+ +VVGT
Sbjct: 93 FINFAKHTHLKVVSLIGGIPIWQQLKQLENQPEIVVGT 130
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 63.3 bits (147), Expect = 4e-09
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQ 420
+AI + GRD+I A++G+GKT ++ + +++ I + L+L+PTRELA Q
Sbjct: 417 QAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGEGPIGLVLSPTRELALQ 476
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I+K ++ ++ C GG+N+ + +L+ GV V+V T
Sbjct: 477 IEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVAT 518
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 63.3 bits (147), Expect = 4e-09
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G DV+ AQ+G+GKTA F++ +L QID S + Q L++APTRELA Q+ +
Sbjct: 40 LNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKY 99
Query: 454 LNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+ GG + L+ G VVVGT
Sbjct: 100 AQGTRIVTLYGGQRYDIQLRALKQGAQVVVGT 131
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 62.9 bits (146), Expect = 5e-09
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQALILAPTRELAQQIQKVV 435
AI + GRD++ QAQ+GTGKTA F++ +++++ D + L++ PTRELA Q+ +
Sbjct: 81 AIPELMLGRDLLGQAQTGTGKTAAFALPLIEKLADNKELNAKVLVMTPTRELATQVAESF 140
Query: 436 IAL-GDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + N A GGT+ + L+ V VVVGT
Sbjct: 141 KSYSSESTNFKTIAIYGGTDYRNQIYALKRKVDVVVGT 178
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 62.9 bits (146), Expect = 5e-09
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A AI ++ +DVIA+A +GTGKT F I +++ ID QAL+LAPTRELA QIQ
Sbjct: 40 AGAIPYFMEWKDVIAKAPTGTGKTFAFGIPMVEHIDPESDAVQALVLAPTRELALQIQDE 99
Query: 433 VIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+ L + C+ GG + + L+ +VV T
Sbjct: 100 LRDLCEFKEGVRSVCLYGGAPIEKQITTLKKHPQIVVAT 138
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 62.9 bits (146), Expect = 5e-09
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQ 420
RAI + GRDV+ AQ+GTGKTA F + +L + + R C+ LILAPTREL Q
Sbjct: 100 RAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDALMKAGTKPAPRTCRGLILAPTRELVSQ 159
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I + + A + + +GG + + + E G ++V T
Sbjct: 160 ICESLRAFTEGSHLKLQVIVGGVAIGPQIKRAERGADLIVAT 201
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 62.9 bits (146), Expect = 5e-09
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+QG D++ QAQ+GTGKT F I +++++ + Q+LILAPTRELA Q+ + +
Sbjct: 37 LQGIDILGQAQTGTGKTGAFGIPLIEKV-VGKQGVQSLILAPTRELAMQVAEQLREFSRG 95
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG + + L+ G +VVGT
Sbjct: 96 QGVQVVTVFGGMPIERQIKALKKGPQIVVGT 126
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 62.9 bits (146), Expect = 5e-09
Identities = 30/89 (33%), Positives = 55/89 (61%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G++++ ++++GTGKTA++ + +L I++S Q +IL P RELA QI + V + +
Sbjct: 145 GKNLLVRSKNGTGKTASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRMSEGTG 204
Query: 460 AXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+GGT++ ++ +GV V+VGT
Sbjct: 205 VISAPVVGGTSMQDDIIRVSNGVHVMVGT 233
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 62.9 bits (146), Expect = 5e-09
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT-----SIRECQ----ALILAPTRE 408
+AI +Q RD+I A++G+GKTA F I +L I T I E A+ILAPTRE
Sbjct: 420 QAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRE 479
Query: 409 LAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LAQQI++ I G L A IGG + + +L G +V+ T
Sbjct: 480 LAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIAT 525
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 62.9 bits (146), Expect = 5e-09
Identities = 31/98 (31%), Positives = 55/98 (56%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A + P + GRD I A++G+GKT F++ I+++I A++L PTRELA Q+ +
Sbjct: 180 AACVEPILSGRDCIGGAKTGSGKTMAFALPIVERIARDPFGVWAVVLTPTRELAYQLSEQ 239
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G L +GG ++ + +LE+ ++V T
Sbjct: 240 FLVIGKPLGLTTATIVGGMDMMKQAQELEARPHIIVAT 277
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 62.9 bits (146), Expect = 5e-09
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
R++IAQ+QSGTGKT F ++IL ++D + QAL LAP+RELA+QIQ V+ ++G
Sbjct: 136 RNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQ--- 192
Query: 460 AXCXACIGGTNVP*RYXQLESGV--XVVVGT 546
C + +P + E+GV VVVGT
Sbjct: 193 -FCTGLVVDAAIPGAISR-ETGVKANVVVGT 221
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 62.9 bits (146), Expect = 5e-09
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----TSIRECQALILAPTRELAQQ 420
A +I +QG DV+A A++G+GKT F + +++++ T ALI++PTRELA Q
Sbjct: 69 ADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQ 128
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I +V+ +G H + IGG +V ++ S + +++GT
Sbjct: 129 IYEVLTKIGSHTSFSAGLVIGGKDVKFELERI-SRINILIGT 169
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 62.5 bits (145), Expect = 6e-09
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I + GRDV+ QAQ+GTGKTA F++ +L + + + Q L+LAPTRELA Q+ +
Sbjct: 43 AATIPALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEA 102
Query: 433 VIALGDHLNA-XCXACIGGTNVP*RYXQLESGVXVVVGT 546
++ GG + + L+ GV V+VGT
Sbjct: 103 FQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGT 141
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 62.5 bits (145), Expect = 6e-09
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+AI + +D+I ++ +GTGKT F + ILQ ++T +++ QA+IL PT ELA QI + V
Sbjct: 30 KAIPVALNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQPQAIILCPTHELASQIIEQV 89
Query: 436 IALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
+L I GG+++ + L ++VGT
Sbjct: 90 RKFATYLEGVNATLICGGSHIQRQIYALRKS-NIIVGT 126
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 62.5 bits (145), Expect = 6e-09
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +1
Query: 262 IMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
++P I + +D+I ++Q+G+GKTA F+I I Q +D + QAL+L PTRELA Q+++ +
Sbjct: 34 VIPAILEHKDIIVKSQTGSGKTAAFAIPICQLVDWDENKPQALVLVPTRELAIQVKEDMF 93
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+G A G + +L+ VVVGT
Sbjct: 94 NIGRFKRLKVAAVYGKAPFYHQEKELKQKTHVVVGT 129
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 62.5 bits (145), Expect = 6e-09
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH-LNA 462
D++A AQ+GTGKTA F ++Q+ID + R QALIL+PTREL QI + +
Sbjct: 42 DLVALAQTGTGKTAAFGFPVIQKIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGI 101
Query: 463 XCXACIGGTNVP*RYXQLESGVXVVVGT 546
A GG ++ + ++ G ++V T
Sbjct: 102 NVVAVYGGASITEQARDIKRGAQIIVAT 129
>UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=4; Flavobacteriaceae|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family protein
- Polaribacter dokdonensis MED152
Length = 373
Score = 62.5 bits (145), Expect = 6e-09
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN-- 459
D I AQ+GTGKTA F + +L ID + QALIL+PTREL QQI+K + +++
Sbjct: 42 DFIGLAQTGTGKTAAFGLPVLHHIDANSDHIQALILSPTRELVQQIKKQLFKFTKYVDDR 101
Query: 460 AXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A GG + + L+ +V+ T
Sbjct: 102 IFLEAVFGGEKIDRQMNNLKRTTHIVIAT 130
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 62.1 bits (144), Expect = 8e-09
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G D+I QA+SGTGKT FS L + Q LILAPTRE+A QI V+ A+G +
Sbjct: 100 GLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKME 159
Query: 460 A-XCXACIGGT 489
C IGGT
Sbjct: 160 GLECHVFIGGT 170
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 62.1 bits (144), Expect = 8e-09
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 10/108 (9%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID----------TSIRECQALILAPT 402
A +I ++G D+I QA++GTGKT F I+IL +I T+ + QAL++ PT
Sbjct: 81 AMSIPIAVEGTDLIGQARTGTGKTLAFGITILLRITLPGDEGWEELTTKGKPQALVMCPT 140
Query: 403 RELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
RELA Q+ K + A GG + L++GV VVVGT
Sbjct: 141 RELALQVSKDISTAASVRGARVLTVYGGVGYESQIDALKAGVDVVVGT 188
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 62.1 bits (144), Expect = 8e-09
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQK 429
AI I GRDV+ +A +G+GKT F + +L ++ + RE +ALIL+PTRELA QI
Sbjct: 259 AIPDAIAGRDVLGRASTGSGKTLAFGVPLLSRLSATPREDNRPRALILSPTRELAMQIAD 318
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +L + GG + + + GV +VV T
Sbjct: 319 ALSSLASSMGLSTILIAGGMSYGPQTKAFKRGVDLVVAT 357
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 62.1 bits (144), Expect = 8e-09
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQI 423
A A+ ++G+D+I QA++GTGKT F++ I +++ S R+ +AL+L PTRELA Q+
Sbjct: 29 AAALPLALEGKDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQV 88
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ A+ HL A GGT + L G VV T
Sbjct: 89 ASELTAVAPHLKV--VAVYGGTGYGKQKEALLRGADAVVAT 127
>UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 430
Score = 62.1 bits (144), Expect = 8e-09
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Frame = +1
Query: 241 FCNPARAI-MPC-IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALIL 393
+C P +A+ +P + GRDV QAQ+GTGKT F S + + + +ALI+
Sbjct: 31 YCTPIQALALPLTLSGRDVAGQAQTGTGKTLAFLASTFHYLLSHPANAERQTNQPRALIM 90
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
APTRELA QI AL GG + LE+GV ++VGT
Sbjct: 91 APTRELAVQIHSDAEALSHLTGLKLGLAYGGDGYDKQLKVLENGVDILVGT 141
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 62.1 bits (144), Expect = 8e-09
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G D+I QA+SGTGKT FS L + Q LILAPTRE+A QI V+ A+G +
Sbjct: 99 GLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKME 158
Query: 460 A-XCXACIGGT 489
C IGGT
Sbjct: 159 GLECHVFIGGT 169
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQK 429
+ I + GRDV+A A++G+GKTA F I + +++ T + +ALIL+PTRELA Q Q+
Sbjct: 67 KTIPIALDGRDVVAMARTGSGKTACFLIPMFEKLKTRQAKTGARALILSPTRELALQTQR 126
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +G +GG ++ ++ + ++V T
Sbjct: 127 FIKEIGRFTGLKSSVILGGDSMDNQFSAIHGNPDIIVAT 165
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQI--------DTSIRECQALILAPTRELAQQIQKVVI 438
RD+IA A++GTGKT + I ++Q + +TS AL+LAPTRELA QIQK +
Sbjct: 214 RDLIALAETGTGKTFAYLIPLIQFVLKLPKLTEETSASGPYALVLAPTRELALQIQKETL 273
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVV 540
L CIGG + + +L +G +VV
Sbjct: 274 KLATPFGLRVCCCIGGEPMQPQIEELSNGAEIVV 307
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPTRELAQQ 420
+AI ++G+D++ AQ+G+GKTA FS+ ILQ+I + +ALILAPTRELA Q
Sbjct: 116 QAIPSQLEGQDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQ 175
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I++ + + + +GG + + ++ G+ V++ T
Sbjct: 176 IEQTIRNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIAT 217
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQI 423
RAI + DV A AQ+GTGKTA F + +LQ++ D R + L++APTREL+ QI
Sbjct: 30 RAIPLILAKSDVFATAQTGTGKTAAFGLGMLQRLRKTSDDKQRALRGLVIAPTRELSIQI 89
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + + ++ +GG ++ + L+ GV +V+ T
Sbjct: 90 YEDLQSYAKNMGINIAVLVGGKDLESQQKILKEGVDIVIAT 130
>UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2;
Treponema|Rep: ATP-dependent RNA helicase - Treponema
pallidum
Length = 649
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQG-RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 429
A AI + G ++IA+A++GTGKTA F + ++Q++ + AL+L PTRELA Q+
Sbjct: 74 AAAIPRLLAGDANIIAKARTGTGKTAAFGLPLIQELGSPCEHPGALVLVPTRELAAQVAS 133
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +L GG ++ + LE G ++VGT
Sbjct: 134 ELSSLRIQKIPRIHTVYGGVSIAEQLRNLEQGGEIIVGT 172
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 61.7 bits (143), Expect = 1e-08
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDT----SIRECQALILAPTRELAQQI 423
+AI ++G+D++ AQ+G+GKTA+F + ILQ + T R AL+L PTRELA Q+
Sbjct: 38 QAIPAILKGKDILGIAQTGSGKTASFVLPILQMLQTKPLGKNRHINALVLVPTRELAVQV 97
Query: 424 QKVVIALGDHL--NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+V A + L A GG ++ + QL+ GV +++ T
Sbjct: 98 GQVFQAFSNALPNKIKSLAVYGGVSINPQMIQLQ-GVEILIAT 139
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 RAIMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTS--IRECQALILAPTRELAQQIQ 426
R +P I +GRDV+A A++G+GKTA F I + +++ + +ALIL+PTRELA Q
Sbjct: 67 RKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTY 126
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
K + LG + +GG ++ ++ + + V+V T
Sbjct: 127 KFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVAT 166
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----ALILAPTRELAQQIQKVVI 438
+ GRD++ AQ+G+GKT + + + I+ R + AL+LAPTRELAQQIQ+V I
Sbjct: 192 MSGRDLVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAI 251
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G + + GG + LE GV +V+ T
Sbjct: 252 EFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIAT 287
>UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5;
Trypanosomatidae|Rep: DEAD box RNA helicase, putative -
Leishmania major
Length = 657
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQ 420
+R I +QGRD++A+A++G GKT F I I++ + S A+I+ PTREL Q
Sbjct: 191 SRCIPAALQGRDLLAEAKTGAGKTLAFLIPIVEIVCRSGFRPSNGTAAIIIGPTRELCLQ 250
Query: 421 IQKVVIALGDHLNAXC--XACIGGTNVP*RYXQLESGVXVVVGT 546
I+ V++ L H N CIGG + +L +G+ +VV +
Sbjct: 251 IEGVLLKLLKHFNGSLTFLCCIGGQSRNQEGFKLANGIMIVVAS 294
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Frame = +1
Query: 265 MP-CIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQQIQ 426
MP + GRD++ AQ+G+GKT + L I +R AL+LAPTRELAQQIQ
Sbjct: 153 MPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRGDGPIALVLAPTRELAQQIQ 212
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+V G +NA GG + LE G +V+ T
Sbjct: 213 QVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIAT 252
>UniRef50_Q53FI9 Cluster: Nucleolar protein GU2 variant; n=3;
Eutheria|Rep: Nucleolar protein GU2 variant - Homo
sapiens (Human)
Length = 363
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
Frame = +1
Query: 268 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTS------IRECQALILAPTRELAQQIQK 429
P +G+D+IAQA++GTGKT +F+I +++++ + R + L+LAPT ELA Q+ K
Sbjct: 170 PVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTGELANQVAK 229
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L+ C GGT+ + + +G+ ++VGT
Sbjct: 230 DFKDITRKLSVACF--YGGTSYQSQINHIRNGIDILVGT 266
>UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 568
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID--------TSIRECQALILAPTREL 411
+AI +Q RD+I A++G+GKTA+F I +L I T QALIL PTREL
Sbjct: 296 QAIPIGLQNRDLIGIAETGSGKTASFLIPLLAYISKLPKLDEHTKALGPQALILVPTREL 355
Query: 412 AQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
AQQI+ L C + +GG ++ + L G +V+ T
Sbjct: 356 AQQIETETNKFAGRLGLRCVSIVGGRDMNDQAYALRDGAEIVIAT 400
>UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22;
Gammaproteobacteria|Rep: ATP-dependent RNA helicase rhlB
- Pseudomonas aeruginosa
Length = 397
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Frame = +1
Query: 241 FCNP--ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALIL 393
+C P A+ + ++G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+
Sbjct: 31 YCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALII 90
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLES 522
APTREL QI K AL + +GG + + QLE+
Sbjct: 91 APTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEA 133
>UniRef50_UPI00005A557C Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1; n=1; Canis
lupus familiaris|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 4A, isoform 1 - Canis
familiaris
Length = 430
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 268 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
PC++ I+ + SGTG TATF+ISILQQID ++ +A LAPTR LAQQIQKV
Sbjct: 177 PCLR---YISCSPSGTGNTATFAISILQQIDLDLKATKASGLAPTRVLAQQIQKV 228
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQ-----IDTSIRECQALILAPTRELAQQIQKVVI 438
I G D++ AQ+GTGKTA FS+ I+ + ID + ++LIL PTRELA QI + +
Sbjct: 37 INGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNID 96
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
D L GG + +E G+ ++V T
Sbjct: 97 DYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVAT 132
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 61.3 bits (142), Expect = 1e-08
Identities = 41/101 (40%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQI 423
A AI + +DV+A A +GTGKTA F + LQ + R+ + LILAPTRELA QI
Sbjct: 29 AEAIPEMLLSKDVLAGAATGTGKTAAFVLPALQFLLDDPRPSRKPRVLILAPTRELAFQI 88
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
KVV LG H GG + L+S + ++V T
Sbjct: 89 HKVVKQLGAHCPFESNVVTGGFASDKQLEILQSKIDILVAT 129
>UniRef50_A6QHA1 Cluster: ATP-dependent RNA helicase DEAD/DEAH box
family protein; n=16; Staphylococcus|Rep: ATP-dependent
RNA helicase DEAD/DEAH box family protein -
Staphylococcus aureus (strain Newman)
Length = 448
Score = 61.3 bits (142), Expect = 1e-08
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = +1
Query: 262 IMPCIQGR-DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
I+P I R ++I Q+Q+GTGK+ F + ++Q ID+ I+E QA+++APTRELAQQ+
Sbjct: 34 IIPRILKRTNLIGQSQTGTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAAN 93
Query: 439 ALGD-HLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L IGGT++ + + +++GT
Sbjct: 94 HLSQFKAGVSVKVFIGGTDIEKDRQRCNAQPQLIIGT 130
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 61.3 bits (142), Expect = 1e-08
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID---TSIREC--QALILAPTRELAQQ 420
+AI ++G D+I AQ+GTGKTA F++ IL Q+D + C Q L+L+PTRELA Q
Sbjct: 25 QAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQLDLDRSRADACAPQVLVLSPTRELAVQ 84
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I + G ++ GG + L+ GV V + T
Sbjct: 85 IAQSFNVYGRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIAT 126
>UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent
RNA helicase; n=4; Bacteroidetes|Rep: RhlE-like DEAD box
family ATP-dependent RNA helicase - Gramella forsetii
(strain KT0803)
Length = 455
Score = 61.3 bits (142), Expect = 1e-08
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC-QALILAPTRELAQQIQKV 432
+A + GRDV+ AQ+GTGKT + + +L+ + S ++ + LI+ PTREL Q+ +
Sbjct: 38 QAFSSIMSGRDVVGIAQTGTGKTFAYLLPLLRMLKYSEQKNPRILIMVPTRELVVQVVEE 97
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L ++N GG N+ ++ L G+ +VV T
Sbjct: 98 IEKLAKYINLRVAGVYGGVNINTQHQDLMQGLDIVVAT 135
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI +QGRD+I A++G+GKT F++ IL + + + AL+L PTRELA QI +
Sbjct: 43 AIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFE 102
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + +GG + + L +++ T
Sbjct: 103 ALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIAT 138
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 61.3 bits (142), Expect = 1e-08
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIA 441
I I G DVI QA+SG GKTA F +S LQQI+ S + AL+L TRELA QI +
Sbjct: 77 IPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVR 136
Query: 442 LGDHL-NAXCXACIGGTNVP*RYXQLESGV-XVVVGT 546
+L + GG N+ L++ +VVGT
Sbjct: 137 FSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGT 173
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
AI +QGRD+I A++G+GKT F++ IL + + + AL+L PTRELA QI +
Sbjct: 54 AIPLALQGRDIIGLAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFE 113
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + +GG + + L +++ T
Sbjct: 114 ALGSSIGVQSAVIVGGIDSMSQSLALAKKPHIIIAT 149
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+ I I G+DV+ QA++GTGKTA F +S+L Q+ + L+L TRELA QI+
Sbjct: 67 QCIPNAIHGKDVLCQAKAGTGKTAVFVLSVLNQLPDDAKPFSCLVLCHTRELAFQIKNEF 126
Query: 436 IALGDHLNAXCXACIGG 486
LG N A GG
Sbjct: 127 KRLGKFTNFKVKAVYGG 143
Score = 35.1 bits (77), Expect = 1.1
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 173 TFDDMNLKEELLRGIYAYGXEKPSAIQH 256
+F+D +LK++LLR + G E+PS +QH
Sbjct: 39 SFNDFSLKQDLLRSVKEAGFERPSEVQH 66
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 60.9 bits (141), Expect = 2e-08
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQK 429
+ I + G+DV+A A++G+GKTA F I + +++ + +ALIL+PTRELA Q K
Sbjct: 66 KTIPVILDGKDVVAMARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMK 125
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG +GG ++ ++ L +++GT
Sbjct: 126 FTKELGKFTKLKTALILGGDSMDDQFAALHENPDIIIGT 164
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/91 (31%), Positives = 54/91 (59%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+Q +D++ ++Q+G+GKTA+F I + + ++ + QAL+L PTRELA Q+++ + +G
Sbjct: 39 LQKKDLVVKSQTGSGKTASFGIPLCEMVEWEENKPQALVLTPTRELAVQVKEDITNIGRF 98
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A G + + +L+ +VVGT
Sbjct: 99 KRIKAAAIYGKSPFARQKLELKQKTHIVVGT 129
>UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=4;
Sphingobacteriales|Rep: Possible ATP-dependent RNA
helicase - Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469)
Length = 463
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID-TSIRECQALILAPTRELAQQIQK 429
++AI + G D+I AQ+GTGKTA +++ IL +I +A+I PTREL QI+
Sbjct: 33 SKAIPQILAGHDIIGVAQTGTGKTAAYALPILMKIKYAQGHNPRAVIFGPTRELVMQIEI 92
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ L + + A GG + L+ GV ++V T
Sbjct: 93 AMKQLAKYTDLRIVALYGGIGPKLQKEHLQKGVDIIVAT 131
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQI 423
++I P + G DV+A AQ+GTGKTA F I +L + + + L++APTRELA QI
Sbjct: 30 KSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNTLINVKKSEHTDISCLVMAPTRELAVQI 89
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+V +G + GG + + G+ ++V T
Sbjct: 90 SEVFKKIGAYTRLRTVCITGGVEQEAQIAAADYGIDILVAT 130
>UniRef50_Q03YT1 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Superfamily II DNA and RNA helicase -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 431
Score = 60.9 bits (141), Expect = 2e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G + A +GTGKT F + +L +IDT+++ Q LILAP++ELA Q +V G+ +
Sbjct: 30 GDSIFGLAPTGTGKTLAFVLPVLSRIDTNLKRTQVLILAPSQELAMQTTQVAREWGNAVG 89
Query: 460 AXCXACIGGTN 492
A + IGG N
Sbjct: 90 ASVASLIGGAN 100
>UniRef50_A3WBM2 Cluster: Cold-shock dead-box protein A; n=1;
Erythrobacter sp. NAP1|Rep: Cold-shock dead-box protein
A - Erythrobacter sp. NAP1
Length = 598
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-ALILAPTRELA 414
A A+ P GRD+I AQ+G+GKT F I++ Q I T ++E L +APTRELA
Sbjct: 27 AAAMAPDSAGRDLIVSAQTGSGKTVAFGIALAQDILDQISGTPLQERPLVLAIAPTRELA 86
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q+ + + L C+GG + L SG +VVGT
Sbjct: 87 LQVSRELGWLYAKAGLRIATCVGGMDASKERRALRSGPAIVVGT 130
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
++AI + D+I +++G+GKTA F +SILQ + Q LIL P RELA Q+
Sbjct: 31 SKAIPHILNNEDLIVMSKTGSGKTAVFGVSILQLTNPEEAGPQGLILTPARELAVQVDND 90
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ + +L A G N+ L GV +V GT
Sbjct: 91 IRKMAKYLKHKTTAIYGQHNINLETQILNKGVSIVTGT 128
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 60.9 bits (141), Expect = 2e-08
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A AI + D+I Q++SGTGKT + I+++Q + +I + A+I+ PTRELA Q+Q
Sbjct: 53 AAAIPMALAKMDLIIQSKSGTGKTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDT 112
Query: 433 VIAL-GDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + C A IGGT+V ++ V++GT
Sbjct: 113 FFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES-RVIIGT 150
>UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 441
Score = 60.9 bits (141), Expect = 2e-08
Identities = 34/91 (37%), Positives = 49/91 (53%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
I G + I +Q+GTGKTA F++ I+ + AL+++PTRELAQQI + G
Sbjct: 38 ITGHNCIVISQTGTGKTAAFALPIISTLSKDPYGIYALVISPTRELAQQICQQFKIFGRG 97
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+NA IGG + + LE +VV T
Sbjct: 98 MNADICPIIGGLAITDQASALEKNPHIVVAT 128
>UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Pseudomonas putida (strain KT2440)
Length = 398
Score = 60.9 bits (141), Expect = 2e-08
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Frame = +1
Query: 241 FCNP--ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-------IRECQALIL 393
+C P A+ + ++G+D I +AQ+GTGKTA F ISI+ Q+ + + E +ALI+
Sbjct: 31 YCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRALII 90
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLES 522
APTREL QI K AL + + +GG + + LE+
Sbjct: 91 APTRELVVQIAKDAAALTKYTGLNVMSFVGGMDFDKQLKALEA 133
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G+DV A A +G+GKT + + +L+++ TS E QAL+L PTRELA Q+ +V+ +G
Sbjct: 57 LTGKDVFALANTGSGKTLAYGLPLLERLKTS-PEQQALVLVPTRELAMQVSEVLTHVGTA 115
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L GG + + L ++V T
Sbjct: 116 LGLNTLCLCGGVDKTEQQNALAENPNILVAT 146
>UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1;
Salinibacter ruber DSM 13855|Rep: ATP-dependent RNA
helicase - Salinibacter ruber (strain DSM 13855)
Length = 478
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI---- 423
+AI + GRD+I Q+Q+G+GKT F + + ++ E Q LIL PTRELA+QI
Sbjct: 70 KAIPYTLDGRDLIVQSQTGSGKTGAFLLPLFDLVNPDKEEQQVLILTPTRELARQIHEEF 129
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+++ IA GG + L++G VV+GT
Sbjct: 130 EQMKIATPRTNRMEAVLIYGGVGYQPQIDGLKNGAQVVIGT 170
>UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 703
Score = 60.5 bits (140), Expect = 3e-08
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 RAIMPCIQG-RDVIAQAQSGTGKTATFSISILQQID--TSIRECQALILAPTRELAQQIQ 426
+ ++P + DV+A +++G+GKTA+F + I+Q+++ ++I C+ LI+ P+RELA Q
Sbjct: 28 KEVIPVVLADHDVVAMSKTGSGKTASFLLPIVQKLNEHSTITGCRCLIITPSRELALQTG 87
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
N C IGG +P ++ L V++ T
Sbjct: 88 HYFQKYASQTNLKCAQIIGGEALPPQFESLTKNPDVIIAT 127
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G D+I QA+SGTGKT F+ L + Q L+LAPTRE+A QI VV+A+G +
Sbjct: 63 GLDLIVQAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAME 122
Query: 460 A-XCXACIGG 486
C IGG
Sbjct: 123 GLECHVFIGG 132
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--CQALILAPTRELAQQIQK 429
+ I ++GRD++A A++G+GKTA F I + +++ + +ALIL+PTRELA Q K
Sbjct: 65 KTIPLALEGRDIVAMARTGSGKTACFLIPLFEKLKIRQAKVGARALILSPTRELALQTLK 124
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ LG +GG N+ ++ + +++ T
Sbjct: 125 FIKELGRFTGLKATIILGGDNMENQFSAIHGNPDILIAT 163
>UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 598
Score = 60.1 bits (139), Expect = 3e-08
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Frame = +1
Query: 256 RAIMPC-IQGRDVIAQAQSGTGKTATFSISI----LQQIDTSIREC-QALILAPTRELAQ 417
+A +P I+ D+ +AQ+G+GKT F + I ++Q+ T+ + C AL++APTRELA+
Sbjct: 37 KATIPLFIKNHDLAVEAQTGSGKTLAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAK 96
Query: 418 QIQKVVIALGDHL---NAXCXACIGGTNVP*RYXQLES-GVXVVVGT 546
QI ++ + L HL CIGG + ++S G +++ T
Sbjct: 97 QIHEIAVQLASHLENNQFSIQLCIGGVSTKIDVSNIQSQGANILIAT 143
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 60.1 bits (139), Expect = 3e-08
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 462
+DV+ +A +GTGKT + I L+ ID + Q +I APTREL QI +V+
Sbjct: 35 KDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRELVMQIHQVIQLFSQGSGI 94
Query: 463 XCXACIGGTNVP*RYXQLESGVXVVVGT 546
A IGG + ++ +L+ ++VGT
Sbjct: 95 KSGAFIGGVELKRQHERLKKKPQIIVGT 122
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 60.1 bits (139), Expect = 3e-08
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
+ I ++G+D+IA++++G+GKTA F+I I + I QAL+L PTRELA Q++ +
Sbjct: 33 KVIPLALEGKDIIAKSKTGSGKTAAFAIPICESIVWEENLPQALVLEPTRELAYQVKDEI 92
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+G GG + L+ +VVGT
Sbjct: 93 FNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHIVVGT 129
>UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Maricaulis maris (strain MCS10)
Length = 787
Score = 60.1 bits (139), Expect = 3e-08
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQ---ALILAPTRELAQQIQKVVI 438
+GRD++ AQ+G+GKTA F +++ + + D ALI+APTRELA Q+Q+ +
Sbjct: 36 EGRDLLVSAQTGSGKTAAFGMAMAKTLLGDDDQFNRPDLPMALIVAPTRELALQVQRELA 95
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L +C+GG + LE G +VVGT
Sbjct: 96 WLYGEARGQIASCVGGMDPRAERKALERGCHIVVGT 131
>UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: ATP-dependent RNA
helicase - Lentisphaera araneosa HTCC2155
Length = 542
Score = 60.1 bits (139), Expect = 3e-08
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Frame = +1
Query: 241 FCNPAR-AIMPC-IQGRDVIAQAQSGTGKTATFSISILQ------QIDTSIRECQALILA 396
FC P + ++P ++G+DV A+AQ+GTGKTA F IS+ Q + +ALILA
Sbjct: 137 FCTPVQEGVLPISLKGQDVAAKAQTGTGKTAAFLISMYNHFVNNPQTEVKAGTPRALILA 196
Query: 397 PTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
PTRELA QI LG + + GG + + L V + V T
Sbjct: 197 PTRELALQIGADAEGLGKYCDIRVETFFGGMDFDKQAQILRGRVDIAVAT 246
>UniRef50_A3I404 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. B14905|Rep: Putative uncharacterized
protein - Bacillus sp. B14905
Length = 382
Score = 60.1 bits (139), Expect = 3e-08
Identities = 28/91 (30%), Positives = 56/91 (61%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
++G+D++A++ +G+GKT + + +L +++ + ++ Q LI+AP++ELA QI +V+
Sbjct: 32 LEGKDIVAESPTGSGKTLAYVLPLLNKVNGAKKQTQGLIVAPSQELAMQIVEVIREWTAG 91
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ IGG N + +L+ +VVGT
Sbjct: 92 TDITVQQLIGGANSARQIEKLKKKPTIVVGT 122
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 59.7 bits (138), Expect = 4e-08
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G D+I +++SGTGKT FS L+ ++T+ Q LIL PTRE+A QI+ V+ ++G H+N
Sbjct: 61 GFDLIVKSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVN 120
Query: 460 A-XCXACIGG 486
+ IGG
Sbjct: 121 GLKIESFIGG 130
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 59.7 bits (138), Expect = 4e-08
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQID---TSIRECQALILAPTRELAQQI 423
A I + G+D++ + ++G+GKT +F + L + T + +A+IL PTRELA Q+
Sbjct: 89 AATIPDALAGKDILGRGRTGSGKTLSFGLPTLATLAGGRTEKHKPRAVILTPTRELAMQV 148
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ GD L GGT++ + LE GV V+V T
Sbjct: 149 ADALQPYGDVLGLKMKVVCGGTSMGNQIYALERGVDVLVAT 189
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 59.7 bits (138), Expect = 4e-08
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
+ AI ++G+D+I AQ+GTGKTA F+I ++ ++ + QALIL PTREL Q+ +
Sbjct: 37 SEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIELLEVESKHLQALILCPTRELVIQVSEQ 96
Query: 433 VIALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L + N GG + + L +V+ T
Sbjct: 97 FRKLIKYKGNFEVVPIYGGQEIERQLRALRKNPQIVIAT 135
>UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducible
ATP-independent RNA helicase; n=2;
Enterobacteriaceae|Rep: Cold-shock DEAD-box protein A,
inducible ATP-independent RNA helicase - Blochmannia
floridanus
Length = 487
Score = 59.7 bits (138), Expect = 4e-08
Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
++G D++ A +G+GKTA F + +LQ ID R Q LI+ PTRELA QI V +
Sbjct: 41 LKGCDLLGMAHTGSGKTAAFLLPLLQNIDIKQRFVQGLIIVPTRELAIQIGHVCMYFIKS 100
Query: 454 LNAXCXACI--GGTNVP*RYXQLESGVXVVVGT 546
L+ + GG N ++ L+ +++GT
Sbjct: 101 LSHIINIAVLYGGQNYRIQFNDLKKNPHIIIGT 133
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 59.7 bits (138), Expect = 4e-08
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Frame = +1
Query: 259 AIMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
A +P + G DV A+A++G+GKTA F I +L +I S QAL+L PTRELA Q+ K +
Sbjct: 33 ATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDRIVVSDFTTQALVLCPTRELADQVSKEL 92
Query: 436 IALGDHL-NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L N GG + + L +VVGT
Sbjct: 93 RRLARFAQNIKILTLCGGQPMGQQLDSLVHAPHIVVGT 130
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 59.7 bits (138), Expect = 4e-08
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-----CQALILAPTRELAQ 417
A++I ++GRD++ AQ+GTGKTA+F++ +L ++ + R + L+LAPTREL
Sbjct: 35 AQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHRLAATPRPAPKNGARVLVLAPTRELVS 94
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVV 540
QI + H GG + + LE GV ++V
Sbjct: 95 QIADGFESFSRHQPVRVTTIFGGVSQVHQVKALEEGVDIIV 135
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,084,926
Number of Sequences: 1657284
Number of extensions: 11693840
Number of successful extensions: 34716
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 32838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34084
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -