Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0267.Seq
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1284 - 28988287-28988922,28989335-28989765,28989850-289899... 121 3e-28
02_01_0355 + 2558792-2558862,2558993-2559099,2559185-2559615,256... 119 1e-27
03_05_0052 - 20293197-20293310,20293938-20294024,20294133-202942... 119 2e-27
01_06_0020 + 25630728-25631023,25631308-25631548,25631629-256317... 118 4e-27
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 75 3e-14
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 72 3e-13
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 72 3e-13
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 72 3e-13
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 69 2e-12
07_03_1392 - 26238885-26239007,26239137-26239235,26239636-262397... 67 1e-11
03_06_0531 + 34552206-34552598,34552665-34552735,34553363-345533... 67 1e-11
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 66 1e-11
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 64 9e-11
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 62 3e-10
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 59 2e-09
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 59 3e-09
03_01_0399 + 3097878-3098141,3098254-3098547,3098659-3098886,309... 59 3e-09
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 58 6e-09
03_05_0865 - 28365430-28367640 58 6e-09
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 56 1e-08
01_05_0296 + 20567259-20567386,20568895-20569123,20569205-205694... 56 1e-08
01_05_0295 + 20537147-20537291,20539111-20539283,20539365-205395... 56 1e-08
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 54 6e-08
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 54 8e-08
08_01_0397 - 3509186-3510291,3510322-3512335 54 1e-07
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 54 1e-07
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 52 2e-07
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 52 4e-07
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 51 5e-07
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 51 7e-07
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 50 1e-06
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 49 2e-06
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 49 2e-06
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 48 5e-06
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 48 7e-06
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 47 1e-05
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 47 1e-05
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 46 2e-05
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 46 3e-05
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 45 3e-05
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 45 3e-05
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 44 8e-05
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 42 3e-04
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 42 4e-04
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 41 6e-04
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 39 0.002
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 39 0.002
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 39 0.003
06_03_0287 - 19168685-19168735,19168847-19168884,19169517-191697... 38 0.004
06_03_1255 + 28780181-28781172,28782065-28782932 38 0.005
03_02_0189 - 6253659-6255380 38 0.007
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 38 0.007
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 36 0.028
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 33 0.20
02_01_0381 - 2764331-2764342,2768966-2769907 30 1.4
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 30 1.4
08_02_0230 - 14572854-14574632 29 2.4
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 27 9.9
>06_03_1284 -
28988287-28988922,28989335-28989765,28989850-28989956,
28990066-28990136
Length = 414
Score = 121 bits (292), Expect = 3e-28
Identities = 62/97 (63%), Positives = 73/97 (75%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
R I+P +G DVI QAQSGTGKTATF ILQQ+D ++ ECQAL+LAPTRELAQQI+KV+
Sbjct: 70 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRELAQQIEKVM 129
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALGD+L AC+GGT+V L SGV VVVGT
Sbjct: 130 RALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGT 166
Score = 58.4 bits (135), Expect = 3e-09
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +2
Query: 149 TDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
T +D+V E+FDDM L+E LLRGIYAYG EKPSAIQ
Sbjct: 34 TSYDEVHESFDDMGLQENLLRGIYAYGFEKPSAIQ 68
>02_01_0355 +
2558792-2558862,2558993-2559099,2559185-2559615,
2560100-2560735
Length = 414
Score = 119 bits (287), Expect = 1e-27
Identities = 61/97 (62%), Positives = 72/97 (74%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
R I+P +G DVI QAQSGTGKTATF ILQQ+D + ECQ+L+LAPTRELAQQI+KV+
Sbjct: 70 RGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVM 129
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALGD+L AC+GGT+V L SGV VVVGT
Sbjct: 130 RALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGT 166
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +2
Query: 149 TDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
T +D+V E+FDDM L+E LLRGIYAYG EKPSAIQ
Sbjct: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQ 68
>03_05_0052 -
20293197-20293310,20293938-20294024,20294133-20294270,
20295009-20295128,20295236-20295343,20296053-20296133,
20296216-20296456,20297010-20297305
Length = 394
Score = 119 bits (286), Expect = 2e-27
Identities = 56/97 (57%), Positives = 75/97 (77%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RA++P I GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PTRELA Q ++V+
Sbjct: 60 RAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVM 119
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+A+GD++N ACIGG ++ +LE GV VV GT
Sbjct: 120 LAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGT 156
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +2
Query: 116 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
GP MD L + +V+ +FD M ++E+LLRGIYAYG EKPSAIQ
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQ 58
>01_06_0020 +
25630728-25631023,25631308-25631548,25631629-25631709,
25632109-25632216,25632329-25632448,25632806-25632943,
25633064-25633150,25633802-25633915
Length = 394
Score = 118 bits (283), Expect = 4e-27
Identities = 56/97 (57%), Positives = 74/97 (76%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RA++P I GRDVIAQAQSGTGKT+ S+S+ Q +DT++RE QALIL+PTRELA Q ++V+
Sbjct: 60 RAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVM 119
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+A+GD +N ACIGG ++ +LE GV VV GT
Sbjct: 120 LAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGT 156
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Frame = +2
Query: 116 GPPGMDPGTLDTDWD---QVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
GP MD L + +V+ +FD M ++++LLRGIYAYG EKPSAIQ
Sbjct: 10 GPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQ 58
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/97 (43%), Positives = 55/97 (56%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
R I+P G D+I Q+ GT T T ILQ++D + ECQAL+L PT +LA + Q V+
Sbjct: 690 RGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYASTECQALVLVPTHDLAHETQNVI 747
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LG L+A A GGT+ L +GV V VGT
Sbjct: 748 GVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGT 784
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/91 (41%), Positives = 54/91 (59%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V LG +
Sbjct: 182 LTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKY 241
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
LN GGT++ +L V ++VGT
Sbjct: 242 LNIQVMVSTGGTSLKDDIMRLYQPVHLLVGT 272
Score = 34.7 bits (76), Expect = 0.049
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 176 FDDMNLKEELLRGIYAYGXEKPSAIQ 253
F+D LK ELL GIY G E+PS IQ
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQ 174
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V LG H
Sbjct: 159 LTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKH 218
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L GGT++ +L V ++VGT
Sbjct: 219 LKIQVMVTTGGTSLKDDIVRLYQPVHLLVGT 249
Score = 34.7 bits (76), Expect = 0.049
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 176 FDDMNLKEELLRGIYAYGXEKPSAIQ 253
F+D LK ELL GIY G E+PS IQ
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQ 151
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G D++A+A++GTGKTA F I L++ID Q +IL PTRELA Q +V LG H
Sbjct: 169 LTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKH 228
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L GGT++ +L V ++VGT
Sbjct: 229 LKIQVMVTTGGTSLKDDIIRLYQPVHLLVGT 259
Score = 34.7 bits (76), Expect = 0.049
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 176 FDDMNLKEELLRGIYAYGXEKPSAIQ 253
F+D LK ELL GIY G E+PS IQ
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQ 161
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 69.3 bits (162), Expect = 2e-12
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQ-ALILAPTRELAQQIQ 426
A I +QGRDVI Q+G+GKTA F++ I+Q + + R C A +LAPTRELA QI
Sbjct: 11 AEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAPTRELAIQIA 70
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
K ALG ++ C IGG + L VVVGT
Sbjct: 71 KQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGT 110
>07_03_1392 -
26238885-26239007,26239137-26239235,26239636-26239720,
26239825-26240028,26240360-26240682,26241904-26242575
Length = 501
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
R I ++GRDV+ A++G+GKTA F++ IL ++ AL LAPTRELA Q+ +
Sbjct: 106 RCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTRELAAQLAEQF 165
Query: 436 IALGDHLNAXCXACIGG 486
ALG L C A IGG
Sbjct: 166 RALGAPLGLRCLAAIGG 182
>03_06_0531 +
34552206-34552598,34552665-34552735,34553363-34553369,
34553603-34553736,34553834-34554245,34554655-34554753,
34555059-34555283,34555652-34556029,34556412-34556555,
34556832-34556927,34557228-34557547,34557965-34558040
Length = 784
Score = 66.9 bits (156), Expect = 1e-11
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 8/103 (7%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRE---CQALILAPTRELAQ 417
++P + GRD+IA+A++GTGKT F I +++Q+ S+R + L+LAPTRELA+
Sbjct: 161 LIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAK 220
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q++K + L+ C GG + + L GV VVVGT
Sbjct: 221 QVEKEIKESAPKLSTVC--VYGGVSYNVQQNALSRGVDVVVGT 261
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 66.5 bits (155), Expect = 1e-11
Identities = 40/104 (38%), Positives = 61/104 (58%), Gaps = 7/104 (6%)
Frame = +1
Query: 256 RAIM-PCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELA 414
RA++ P +QG+D++ +A++GTGKT F I IL I ++ + A++LAPTRELA
Sbjct: 126 RAVLEPAMQGKDMVGRAKTGTGKTLAFGIPILDAIIRHNEKNSPGKFPLAIVLAPTRELA 185
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+Q+++ D N GGT + + QL GV VV+GT
Sbjct: 186 KQVER---EFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGT 226
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 63.7 bits (148), Expect = 9e-11
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 7/104 (6%)
Frame = +1
Query: 256 RAIM-PCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRECQALILAPTRELA 414
RA++ P +QG+D+I +A++GTGKT F I I+ +I + S R A+ILAPTRELA
Sbjct: 121 RAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELA 180
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+Q++K L++ C GG + + L GV VVVGT
Sbjct: 181 RQVEK-EFKESAPLDSLC--VYGGVPISHQMRALNYGVDVVVGT 221
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 62.1 bits (144), Expect = 3e-10
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQ 426
A AI ++GRD+I Q+G+GKT F++ I+Q + + A +L+PTRELA QI
Sbjct: 69 AEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQALLKQDKPQALFACVLSPTRELAFQIG 128
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ ALG + C +GG + + L +VVGT
Sbjct: 129 QQFEALGSAIGLSCTVLVGGVDRVQQAVSLAKRPHIVVGT 168
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 59.3 bits (137), Expect = 2e-09
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---DTSIRECQALILAPTRELAQQI 423
A I + GRD+ A +G+GKTA FS+ +L+++ + + LIL PTRELA Q+
Sbjct: 222 AACIPLALTGRDICGSAITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQV 281
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
++ L + C +GG + + L S +VV T
Sbjct: 282 HSMIEKLAQFTDIRCCLIVGGLSTKVQEVALRSMPDIVVAT 322
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 173 TFDDMNLKEELLRGIYAYGXEKPSAIQHA 259
+F ++NL LLR A G +KP+ IQ A
Sbjct: 195 SFLELNLSRPLLRACEALGYQKPTPIQAA 223
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 58.8 bits (136), Expect = 3e-09
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-------LILAPTRELAQQIQKV 432
+ GRD I A +G+GKT F + L + + E A L+L+PTRELAQQI V
Sbjct: 127 LDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADV 186
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ G GGT+ + L+SGV +V+GT
Sbjct: 187 LCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGT 224
>03_01_0399 +
3097878-3098141,3098254-3098547,3098659-3098886,
3099148-3099224,3099501-3099540,3099737-3099802,
3100305-3100706,3100777-3100888,3101445-3101530,
3101607-3101672
Length = 544
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLNA 462
+D+IAQA +G+GKT F + +L ++D + + QA+ + PTRELAQQ + V++ +G
Sbjct: 141 KDLIAQAHNGSGKTTCFVLGMLSRVDPNRKVTQAICICPTRELAQQNKSVLMRMGKFTGI 200
Query: 463 XCXACI 480
C I
Sbjct: 201 TCACAI 206
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Frame = +2
Query: 80 KNGPSKDQGSYDGPPGMDPGTLD-----TDWDQVVET---FDDMNLKEELLRGIY-AYGX 232
++G S G GPP +D T V E+ F+D+ L ELL+G++ G
Sbjct: 62 EHGGSGGGGDDQGPPLLDDSDESQIQAVTSGGTVYESAAAFEDLKLTPELLKGLHDEMGF 121
Query: 233 EKPSAIQ 253
+PS IQ
Sbjct: 122 SRPSKIQ 128
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQI----DTSIRECQALILAPTRELAQQIQKVVIA 441
+Q RD++A A++G+GKT + I + + + L+LAPTRELA QIQ +
Sbjct: 639 LQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVK 698
Query: 442 LGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G C GGT+ + +LE G +VV T
Sbjct: 699 FGRSSRVSCTCLYGGTSKGLQLRELERGADIVVAT 733
>03_05_0865 - 28365430-28367640
Length = 736
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQID-----TSIRECQ---ALILAPTRELAQQIQK 429
+Q RDVI A++G+GKTA F + +L I + E + A+++APTRELAQQI++
Sbjct: 350 LQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPYAVVMAPTRELAQQIEE 409
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ +L + +GG ++ + ++ G VV+ T
Sbjct: 410 ETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIAT 448
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Frame = +1
Query: 256 RAIMPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQALILAPTRELAQQIQ 426
R MP I G D+ A A++G+GKTA F + ++Q++ + +ALIL+PTR+LA Q
Sbjct: 54 RKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTL 113
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
K LG + +GG ++ ++ +L +++ T
Sbjct: 114 KFAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIAT 153
>01_05_0296 +
20567259-20567386,20568895-20569123,20569205-20569436,
20569583-20569701,20570321-20570377,20570455-20570639,
20571416-20571560,20571630-20571713,20571798-20571861,
20571889-20571932
Length = 428
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/54 (57%), Positives = 35/54 (64%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 423
I I G DVI QA+SG GKTA F +S LQQID + AL+L TRELA QI
Sbjct: 67 IPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQI 120
>01_05_0295 +
20537147-20537291,20539111-20539283,20539365-20539596,
20539743-20539861,20540480-20540536,20540615-20540799,
20542252-20542396,20542463-20542546,20542634-20542697,
20542799-20542809
Length = 404
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/54 (57%), Positives = 35/54 (64%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 423
I I G DVI QA+SG GKTA F +S LQQID + AL+L TRELA QI
Sbjct: 54 IPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQI 107
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 54.4 bits (125), Expect = 6e-08
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQ 420
AR+I P + G DV+A A++G+GKT F +I +L ++ S R ++L PTRELA Q
Sbjct: 114 ARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGTGVIVLCPTRELAIQ 173
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
V L + + IGG ++ QL G+ V+V T
Sbjct: 174 THNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVAT 215
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 54.0 bits (124), Expect = 8e-08
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Frame = +1
Query: 259 AIMPCI-QGRDVIAQAQSGTGKTATFSISILQQIDTSIR--ECQALILAPTRELAQQI-Q 426
A +P I QG DV+A+A++GTGKT F + ++ + T R L++ PTRELA Q+
Sbjct: 103 ATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSINLLVICPTRELANQVAA 162
Query: 427 KVVIALGDHLNAXCXACIGGTNVP*RYXQLES 522
+ L H + IGGT +P ++S
Sbjct: 163 EARKLLKYHRSLGVQVVIGGTKLPQEQRSMQS 194
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQ 417
A+A+ + GRD I A++G+GKT F + +L+ + LI+APTREL
Sbjct: 452 AQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVV 511
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + L C A GG+ V + +L+ G +VV T
Sbjct: 512 QIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCT 554
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQ 417
A+A+ + GRD I A++G+GKT F + +L+ + LI+APTREL
Sbjct: 313 AQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPPVVPGDGPIGLIMAPTRELVV 372
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI + L C A GG+ V + +L+ G +VV T
Sbjct: 373 QIHSDIKKFAKSLGINCVAIYGGSGVAQQISELKRGAEIVVCT 415
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
+ G+D I AQ+G+GKT + +S+ ID QAL++ PTREL Q+ KV
Sbjct: 76 LSGQDCILHAQTGSGKTLAYLLSVFSAIDFGRSSVQALVVVPTRELGMQVTKV 128
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQ------ALILAPTRELA 414
+ I I R ++ A +G+GKTA+F + I+ E C A++LAPTREL
Sbjct: 211 QVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCSHVRSERCTDKQGPLAIVLAPTRELC 270
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q+++ LG L +GG + + ++E+G+ ++VGT
Sbjct: 271 LQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYRIENGIELIVGT 314
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 438
++GRD+I AQ+G+GKT ++ + L + R Q LILAPTRELA QIQ+
Sbjct: 191 LKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQQESG 250
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G + GG + L GV +V+ T
Sbjct: 251 KFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIAT 286
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 50.8 bits (116), Expect = 7e-07
Identities = 39/107 (36%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTR 405
AI I GRD++A AQ+G+GKTA F I+ I +S R Q ALIL+PTR
Sbjct: 267 AIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSS-RPPQRPRGSRTAYPLALILSPTR 325
Query: 406 ELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
EL+ QI + GG + + +LE GV ++V T
Sbjct: 326 ELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVEILVAT 372
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 50.0 bits (114), Expect = 1e-06
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRE 408
AI I GRD++A AQ+G+GKTA F I+ I S + ALIL+PTRE
Sbjct: 353 AIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALILSPTRE 412
Query: 409 LAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L+ QI + GG + + +LE GV ++V T
Sbjct: 413 LSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVAT 458
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-DTSIRECQ----ALILAPTRELAQQ 420
+A+ + GRD+I A++G+GKTA F + ++ I D E + ++ APTRELA Q
Sbjct: 248 QALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEGPIGVVCAPTRELAHQ 307
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
I N A GG + ++ +L++G +V+ T
Sbjct: 308 IYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIAT 349
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--------CQALILAPTRELA 414
A+ C++G+DV+ +A++GTGK+A F + ++ + +++ +LIL PTRELA
Sbjct: 372 ALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELA 431
Query: 415 QQI-QKVVIALGDHLNAXCXACIGGTNVP*RYXQLES 522
Q+ + + L H + IGGT +LES
Sbjct: 432 IQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQRRLES 468
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIA 441
++ RD++A A++G+GKT + I +L+++ + R+ L+L+PTRELA QIQ
Sbjct: 215 LRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKK 274
Query: 442 LGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G GG + LE G +VV T
Sbjct: 275 FGRSSRISSVCLYGGAPKGPQLRDLERGADIVVAT 309
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 47.6 bits (108), Expect = 7e-06
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Frame = +1
Query: 259 AIMPCI-QGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-----CQALILAPTREL 411
A +P I QG+DV+A+A++GTGKT F +I +L + S R+ L++ PTREL
Sbjct: 35 ATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTREL 94
Query: 412 AQQIQ-KVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVV 540
A Q+ + L H + IGGT + +++ VV
Sbjct: 95 AIQVAVEAKKLLKYHRSLGVQVVIGGTRLTQEQRSMQANPCQVV 138
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS----------IRE-CQ-ALILAPT 402
AI + GRD++A AQ+G+GKTA F I+ I +R C ALIL+PT
Sbjct: 185 AIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACPLALILSPT 244
Query: 403 RELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
REL+ QI + GG + + LE GV ++V T
Sbjct: 245 RELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVAT 292
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/72 (29%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQKVVIALGDHLN 459
RD+ + +G+GKT +++ I+Q + T +R +AL++ PTR+LA Q+++V A+ +
Sbjct: 75 RDICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVG 134
Query: 460 AXCXACIGGTNV 495
+ +G +++
Sbjct: 135 LSVGSAVGQSSI 146
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTRELAQQI 423
+ G D++ +A++G GKT F + IL+ + + L+L PTRELA+Q+
Sbjct: 139 LDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQV 198
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G GG++ + + GV +VVGT
Sbjct: 199 HTDFAFYGATFGLSACCVYGGSDYRSQEMAIRKGVDIVVGT 239
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS----IRECQALILAPTRELAQQ 420
AR+I + G+DV+ A++G+GKT F I ++ + + +++ PTRELA Q
Sbjct: 124 ARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAIEMLHHAHFMPRNGTGVVVVCPTRELAIQ 183
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
V L + + IGG QL GV ++V T
Sbjct: 184 THNVAKELMKYHSQTLGYIIGGNGRRGEADQLAKGVNLLVAT 225
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 45.2 bits (102), Expect = 3e-05
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 20/110 (18%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQI------------------DTSIRE--CQALILA 396
QG+DVI A++G+GKT F + ILQ++ D + RE +ALIL
Sbjct: 179 QGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILT 238
Query: 397 PTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
PTRELA+Q+ + L +GG ++ + L+ +VVGT
Sbjct: 239 PTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGT 288
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 45.2 bits (102), Expect = 3e-05
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSIS---ILQQIDTSIRECQA-LILAPTRELAQQIQKVVIA 441
+Q +DV+A A++G+GKT + + ++++ + R L+LAPTRELA QI + +
Sbjct: 185 LQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNNPRSGPTVLVLAPTRELATQILEEAVK 244
Query: 442 LGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
G GG + L+ GV VVV T
Sbjct: 245 FGRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVAT 279
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE-CQALILAPTRELAQQ 420
+AI + GR+ A A +G+GKT F IL +I +E +A+IL PTRELA Q
Sbjct: 175 QAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQ 230
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 7/69 (10%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIREC--QALILAPTRELAQ 417
AI ++G+DV+A+A++G+GKT + + +L ++ + IR+ IL PTREL Q
Sbjct: 113 AIPLILEGKDVVAKAKTGSGKTFAYLLPMLHELLKLSAEGRIRKSAPNVFILVPTRELCQ 172
Query: 418 QIQKVVIAL 444
Q+ +L
Sbjct: 173 QVHNEASSL 181
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 41.5 bits (93), Expect = 4e-04
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRECQ---ALILAPTRELA 414
A+AI + G+ ++ +A +GTGKT + + +LQ + + AL+L PTREL
Sbjct: 52 AQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELC 111
Query: 415 QQIQKVVIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
Q+ + L + I GG N +L G+ +++ T
Sbjct: 112 LQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIAT 156
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 41.1 bits (92), Expect = 6e-04
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Frame = +1
Query: 244 CNP--ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQALILAPT 402
C P A AI + +DV A +G+GKT F + +++ + E +I++PT
Sbjct: 46 CTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRPSPPKPHEVLGIIISPT 105
Query: 403 RELAQQIQKVVIALGDHL-NAXCXACIGGTNVP*RYXQL-ESGVXVVVGT 546
REL+ QI V L +GG ++ +L E G ++VGT
Sbjct: 106 RELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGANILVGT 155
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 39.1 bits (87), Expect = 0.002
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Frame = +1
Query: 256 RAIMP-CIQGRDVIAQAQSGTGKTATFSISIL----------------QQIDTSIRECQA 384
R MP + GRD++A AQ+G+GKTA F + ++ + + + +A
Sbjct: 112 RYSMPIALAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRA 171
Query: 385 LILAPTRELAQQIQKVVI---ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVV 540
L+LAPTRELA Q VI + + + C + N + ++G+ VVV
Sbjct: 172 LVLAPTRELAAQSFDNVIFIDTVNQNFSLFCYEELDNINEEAKKFSFQTGLRVVV 226
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 438
++GRD+I A++G+GKT + + + ++ L+LAPTRELA QIQ+
Sbjct: 126 LRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGDGPIVLVLAPTRELAVQIQQEAT 185
Query: 439 ALG 447
G
Sbjct: 186 KFG 188
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 14/110 (12%)
Frame = +1
Query: 259 AIMPCI-QGRDVIAQAQSGTGKTATFSISILQQI---------DTSIREC--QALILAPT 402
A +P I Q D + Q+ +G+GKT + + IL +I D+S + +A+I+AP+
Sbjct: 622 AAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPS 681
Query: 403 RELAQQI-QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESG-VXVVVGT 546
REL QI ++V LG + +GG N + L+ +VVGT
Sbjct: 682 RELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 731
>06_03_0287 -
19168685-19168735,19168847-19168884,19169517-19169727,
19171461-19171643,19171879-19172028,19172161-19172256,
19172378-19172464,19172535-19172741,19172823-19173047,
19173150-19173261,19173397-19173453,19175522-19176882
Length = 925
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Frame = +1
Query: 241 FCNPARAIMPCIQ-GRDVIAQAQSGTGKTATF------SISILQQIDTSIRE--CQALIL 393
F +P + I G+DV+A+A++GTGKT F +S L ID + +++
Sbjct: 478 FSSPYHVLTSLIYIGKDVLAKAKTGTGKTVAFLLPAIEVVSKLPPIDCDKKRPPISVVVV 537
Query: 394 APTRELAQQ-IQKVVIALGDHLNAXCXACIGGTNV 495
PTRELA Q + L H + IGGT +
Sbjct: 538 CPTRELADQAAAEANKLLKFHPSIGVQLVIGGTRM 572
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 37.9 bits (84), Expect = 0.005
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTRELAQQIQK 429
+ GRD+I A +G+GKT F + ++ ++I I + LI+ P+RELA+Q +
Sbjct: 208 LSGRDMIGIAFTGSGKTLVFVLPLIMAALQEEILMPIVPGEGPFGLIVCPSRELARQTHE 267
Query: 430 VV-IALGDHLNAXC-----XACIGGTNVP*RYXQLESGVXVVVGT 546
V+ + L + A CIGG ++ + ++ GV +VV T
Sbjct: 268 VIEMFLAPLMEAGYPEIRPLLCIGGVDMRTQMEVVKKGVHIVVAT 312
>03_02_0189 - 6253659-6255380
Length = 573
Score = 37.5 bits (83), Expect = 0.007
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 14/110 (12%)
Frame = +1
Query: 259 AIMPCI-QGRDVIAQAQSGTGKTATFSISILQQI---------DTSIREC--QALILAPT 402
A +P I Q D + Q+ +G+GKT + + IL +I D S + +A+I+AP+
Sbjct: 160 AAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPS 219
Query: 403 RELAQQI-QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESG-VXVVVGT 546
REL QI ++V LG + +GG N + L+ +VVGT
Sbjct: 220 RELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPLIVVGT 269
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +1
Query: 370 RECQALILAPTRELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
R +A++L PTREL +Q+ +V ++ H GG+ + + L V +VVGT
Sbjct: 207 RRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDSLNMPVDMVVGT 265
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 35.5 bits (78), Expect = 0.028
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI---------DTSIRECQALILAPTR 405
A A P ++G+ I QSG+GKT + ++Q + +S R + ++L PT
Sbjct: 268 AMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQNLRKEEVEGLHRSSPRNPRVVVLTPTA 327
Query: 406 ELAQQI 423
ELA Q+
Sbjct: 328 ELASQV 333
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 32.7 bits (71), Expect = 0.20
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 256 RAIMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDT 363
RA +P + GRDV+ A++G+GKT F I +L T
Sbjct: 108 RAALPHALCGRDVLGAAKTGSGKTLAFVIPVLMSAAT 144
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATF-----SISILQQIDTSIRECQ---ALILAPTRELAQQ--- 420
+ GRD+I A +G+GKT F +++ +++ I + +I+ P+RELA+Q
Sbjct: 217 LSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYD 276
Query: 421 -IQKVVIALGD--HLNAXCXACIGGTNVP*RYXQLESGVXV 534
I++ ++ L + + CIGG ++ + ++ G+ V
Sbjct: 277 VIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGLIV 317
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +2
Query: 68 PEDSKNGPSKDQGSYDGPPGMDPGTLDTDWDQ 163
P ++ GPS+DQ + + PP + PG D W Q
Sbjct: 392 PAVTETGPSRDQPAEE-PPAVTPGANDGFWQQ 422
>08_02_0230 - 14572854-14574632
Length = 592
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 33 CLIRLKEGQKIGQRIPKMGHRRIKVVTMDLREWTLGHLTPTGIKLSKPSMT*TSKKNC 206
C +RL + QK+ P++ R++ VT R G + I L P++T + NC
Sbjct: 219 CTVRLCDLQKVILAAPRLAELRLESVTFSDRPPLSGFIFDEHIHLHCPAVTSFTMVNC 276
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 27.1 bits (57), Expect = 9.9
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 423
I+ C + GTGKT T SIL Q+ T+ R LI A + A +
Sbjct: 406 ILGCRGVAPYVIYGPPGTGKTMTLVESIL-QLYTAKRRANVLICAASNSAADHV 458
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,784,692
Number of Sequences: 37544
Number of extensions: 334601
Number of successful extensions: 1016
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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