Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0267.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    46   6e-07
AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.            25   1.6  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   5.0  
AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.            23   5.0  
AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.            23   5.0  
AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive ...    23   5.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   5.0  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   6.6  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    23   6.6  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   8.8  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   8.8  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   8.8  
AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         23   8.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 46.4 bits (105), Expect = 6e-07
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
 Frame = +1

Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISIL-------QQIDTSIRECQALILAPTRELAQ 417
           AI   + GRD++A AQ+G+GKTA F + ++         ++   R    +I+APTRELA 
Sbjct: 204 AIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAI 263

Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
           QI                   GGT V  +   +  G  V+V T
Sbjct: 264 QIHDEGRKFAHGTKLKVCVSYGGTAVQHQLQLMRGGCHVLVAT 306



 Score = 24.2 bits (50), Expect = 2.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 167 VETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
           VE+F+   L+EE++  +      KP+ IQ
Sbjct: 173 VESFERSGLREEVMTNVRKSSYTKPTPIQ 201


>AY344837-1|AAR05808.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 41  SSERRSEDWPEDSKNGPSKDQGSY 112
           ++++ + D    SKNGPS  Q S+
Sbjct: 95  ANDQTARDGSSSSKNGPSNSQASF 118


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +2

Query: 305 SQELEKLLLSLYRFYNKSIQAFVNV 379
           S++ E+L+  L+R YNK I+   N+
Sbjct: 24  SEDEERLVRDLFRGYNKLIRPVQNM 48


>AY344838-1|AAR05809.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 41  SSERRSEDWPEDSKNGPSKDQGSY 112
           ++++ + D    SKNGPS  Q S+
Sbjct: 95  ANDQTARDGSASSKNGPSNSQVSF 118


>AY344836-1|AAR05807.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 41  SSERRSEDWPEDSKNGPSKDQGSY 112
           ++++ + D    SKNGPS  Q S+
Sbjct: 95  ANDQTARDGSASSKNGPSNSQVSF 118


>AF203333-1|AAF19828.1|  119|Anopheles gambiae immune-responsive
           alpha-macroglobulinand complement C3-related protein
           IMCR14 protein.
          Length = 119

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 41  SSERRSEDWPEDSKNGPSKDQGSY 112
           ++++ + D    SKNGPS  Q S+
Sbjct: 24  ANDQTARDGSASSKNGPSNSQVSF 47


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 502 FTGHWCHQCKXGIXHSSDHQXLSPPSEF 419
           FT  W + C+  + H+S+   L+    F
Sbjct: 419 FTQFWANLCEKPVQHNSEGMRLAEDERF 446


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 89  PSKDQGSYDGPPGMDPGTLDTDWDQV 166
           P+   G Y  PP M PG +D+D  Q+
Sbjct: 7   PTSVHGPY--PPHMVPGGVDSDGAQI 30


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 101 DPSMAHFWNPLANLLTFFQTNKTCFNR 21
           DP  A     +++ L F QT  TCFN+
Sbjct: 36  DPVPATSTFIVSDFLQFLQTAVTCFNK 62


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = -2

Query: 436 SPPSEFVGPALLWEPGSKLDIHECLYRF 353
           SP S F G    W+ G       CL+ F
Sbjct: 396 SPKSAFTGRIEFWDGGRDFCFLICLFSF 423


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 288 CYRSSPVRNWKNC 326
           C  + PV  W+NC
Sbjct: 43  CLLTEPVEKWRNC 55


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 288 CYRSSPVRNWKNC 326
           C  + PV  W+NC
Sbjct: 43  CLLTEPVEKWRNC 55


>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 145 KCPRVHSRRSIVTTLILRWP 86
           +C R    R I+TT   RWP
Sbjct: 8   RCARASPSRPILTTRGRRWP 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,552
Number of Sequences: 2352
Number of extensions: 13102
Number of successful extensions: 107
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)