Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0267.Seq
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 131 4e-31
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 130 5e-31
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 129 1e-30
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 129 1e-30
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 70 1e-12
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 69 3e-12
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 66 2e-11
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 62 3e-10
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 60 8e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 58 3e-09
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 58 3e-09
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 58 3e-09
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 58 4e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 58 5e-09
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 55 3e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 52 4e-07
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 51 6e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 49 3e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 49 3e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 49 3e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 8e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 46 1e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 46 1e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 46 1e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 46 1e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 46 2e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 46 2e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 41 7e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 41 7e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 41 7e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 9e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.001
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 37 0.011
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 37 0.011
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 35 0.034
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.077
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.077
AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical ... 31 0.41
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 30 0.95
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 1.3
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 2.9
AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.9
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 27 6.7
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 27 6.7
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 27 8.9
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 131 bits (316), Expect = 4e-31
Identities = 65/97 (67%), Positives = 77/97 (79%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV
Sbjct: 55 RAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVV 114
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ALGD++N C ACIGGTN+ +L+ G VV GT
Sbjct: 115 LALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGT 151
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +2
Query: 164 VVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
++ TFD M L+E+LLRGIYAYG EKPSAIQ
Sbjct: 24 IIPTFDKMGLREDLLRGIYAYGFEKPSAIQ 53
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 130 bits (315), Expect = 5e-31
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RA+ ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +RE QALIL+PTRELA QIQKVV
Sbjct: 55 RAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVV 114
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ALGD++N C ACIGGTN+ +L+ G VV GT
Sbjct: 115 LALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGT 151
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +2
Query: 164 VVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
V+ TFD M L+E+LLRGIYAYG EKPSAIQ
Sbjct: 24 VIPTFDKMGLREDLLRGIYAYGFEKPSAIQ 53
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 129 bits (311), Expect = 1e-30
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI+PC G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+
Sbjct: 58 RAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVM 117
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG++LN CIGGT+V +LE+G+ VVVGT
Sbjct: 118 SALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGT 154
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 137 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
G ++ ++DQVVE+FDDM LKEELLRGIY +G EKPSAIQ
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQ 56
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 129 bits (311), Expect = 1e-30
Identities = 64/97 (65%), Positives = 77/97 (79%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVV 435
RAI+PC G+DVIAQAQSGTGKTATFS+SILQ+ID QAL++APTRELAQQIQKV+
Sbjct: 58 RAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVM 117
Query: 436 IALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG++LN CIGGT+V +LE+G+ VVVGT
Sbjct: 118 SALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGT 154
Score = 64.1 bits (149), Expect = 6e-11
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 137 GTLDTDWDQVVETFDDMNLKEELLRGIYAYGXEKPSAIQ 253
G ++ ++DQVVE+FDDM LKEELLRGIY +G EKPSAIQ
Sbjct: 18 GLIEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQ 56
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/91 (31%), Positives = 56/91 (61%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDH 453
+ G+D++A+A++GTGKT + I ++++I +++ QA+++ PTRELA Q ++ + L H
Sbjct: 78 LTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKH 137
Query: 454 LNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+ GGT++ +L V +V+ T
Sbjct: 138 IQLKVMVTTGGTDLRDDIMRLNGTVHLVIAT 168
Score = 32.3 bits (70), Expect = 0.24
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 176 FDDMNLKEELLRGIYAYGXEKPSAIQHA 259
F+D L +LL GI+ G EKPS IQ A
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEA 72
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 68.5 bits (160), Expect = 3e-12
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI +
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + C +GG ++ + +L VVV T
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVAT 214
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 68.5 bits (160), Expect = 3e-12
Identities = 38/98 (38%), Positives = 54/98 (55%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
A I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI +
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + C +GG ++ + +L VVV T
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVAT 214
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQK 429
R +PCI G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q K
Sbjct: 52 RKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFK 111
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
VV LG C +GG + ++ + +++ T
Sbjct: 112 VVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/99 (35%), Positives = 57/99 (57%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 RAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQQIDT-SIRECQALILAPTRELAQQIQK 429
R +PCI G+DV+A +++G+GKTA F I +LQ++ +AL+++PTRELA Q K
Sbjct: 52 RKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPTRELALQTFK 111
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
VV LG C +GG + ++ + +++ T
Sbjct: 112 VVKELGRFTGLRCACLVGGDQIEEQFSTIHENPDILLAT 150
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 62.1 bits (144), Expect = 3e-10
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
A+ PC G+DV Q+Q+G+GKT I ILQ ID Q ++LAP R +AQ+ + +
Sbjct: 26 AVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRGMAQRAHEQLK 85
Query: 439 ALGDHLNAXCXACIG 483
+LG +LN C+G
Sbjct: 86 SLGRNLNVNA-TCLG 99
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/38 (57%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 185 MNLKEELLRGIYAYGXEKPSAIQHA--Q*CLASKDAML 292
M LKEELLRGIY +G EKPSAIQ + C KD +
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTI 38
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 60.5 bits (140), Expect = 8e-10
Identities = 33/96 (34%), Positives = 52/96 (54%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVI 438
A+ +QG+DVI A++G+GKT F+I +LQ + + L+L PTRELA QI +
Sbjct: 74 ALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQQFE 133
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ALG + +GG ++ + L ++V T
Sbjct: 134 ALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVAT 169
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.4 bits (135), Expect = 3e-09
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 10/107 (9%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----------ALILAPTR 405
+AI +Q RDVI A++G+GKTA F + +L I TS+ + + A+I+APTR
Sbjct: 330 QAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPKMERQEHRDLGPYAIIMAPTR 388
Query: 406 ELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ELAQQI++ G L + IGG + + +L GV VV+ T
Sbjct: 389 ELAQQIEEETNKFGKLLGIKTVSVIGGASREDQGMKLRMGVEVVIAT 435
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
ARAI + GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++
Sbjct: 50 ARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKET 109
Query: 433 V 435
V
Sbjct: 110 V 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/61 (44%), Positives = 42/61 (68%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKV 432
ARAI + GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE++ QI++
Sbjct: 50 ARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKET 109
Query: 433 V 435
V
Sbjct: 110 V 110
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 58.0 bits (134), Expect = 4e-09
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 462
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 250 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 309
Query: 463 XCXACIGGTNV 495
I G N+
Sbjct: 310 KIHYAIKGGNM 320
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 58.0 bits (134), Expect = 4e-09
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 462
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 275 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 334
Query: 463 XCXACIGGTNV 495
I G N+
Sbjct: 335 KIHYAIKGGNM 345
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 58.0 bits (134), Expect = 4e-09
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHL-NA 462
++IAQAQSGTGKTA F +++L +ID ++ Q + LAPT ELA+QI +VV +G + N
Sbjct: 659 NLIAQAQSGTGKTAAFVLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNL 718
Query: 463 XCXACIGGTNV 495
I G N+
Sbjct: 719 KIHYAIKGGNM 729
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 57.6 bits (133), Expect = 5e-09
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Frame = +1
Query: 256 RAIMP-CIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR--EC-QALILAPTRELAQQI 423
+A +P + G+D+ A A +GTGKTA F + IL+++ + C + L+L PTRELA Q+
Sbjct: 176 QACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGASCTRVLVLVPTRELAIQV 235
Query: 424 QKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+V L + C GG ++ + L SG VVV T
Sbjct: 236 FQVFRKLSTFIQLEVCLCAGGLDLKAQEAALRSGPDVVVAT 276
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQA-----LILAPTRELAQQIQKVVI 438
+ GRD+I+ A++G+GKT F + L I + L+L PTRELAQQ+Q+V I
Sbjct: 164 MSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSI 223
Query: 439 ALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
L GG + + LE GV +VV T
Sbjct: 224 DFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVAT 259
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 55.2 bits (127), Expect = 3e-08
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIRE-CQALILAPTRELAQQ 420
A++I P ++G+DV+A A++G+GKT F +I +L +++ +I++PTREL+ Q
Sbjct: 96 AKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQHNGTGVIIVSPTRELSMQ 155
Query: 421 IQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
V+ L + N +GG+N +L GV ++V T
Sbjct: 156 TYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVSILVAT 197
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIRECQ---ALILAPTRELAQ 417
A+AI + GRDVI A++G+GKT F + + + I + E A+ILAPTRELA
Sbjct: 332 AQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAM 391
Query: 418 QIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
Q K L GG + + L+ G +VV T
Sbjct: 392 QTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAEIVVCT 434
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 51.6 bits (118), Expect = 4e-07
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ----ALILAPTRELAQQIQKVVIA 441
+ G DV+ A++G+GKT I +L+ + + ALI++PTRELA Q + A
Sbjct: 111 LTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTINA 170
Query: 442 LGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
+G H C IGG++V ++ SG+ ++V T
Sbjct: 171 VGAHHGFSCGLVIGGSDVAFERNRI-SGINIIVCT 204
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 429
I I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 72 IPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 429
I I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 72 IPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 127
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1
Query: 262 IMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQK 429
I I G DV+ QA+SG GKTA F I+ LQQ++ E + + TRELA QI K
Sbjct: 71 IPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISK 126
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 429
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG V Q+E G ++VGT
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 429
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG V Q+E G ++VGT
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Frame = +1
Query: 277 QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELAQQIQK 429
QG D++A AQ+G+GKTA F + I+ ++ D ++ + +IL PTRELA QI
Sbjct: 377 QGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYN 436
Query: 430 VVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG V Q+E G ++VGT
Sbjct: 437 EGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGT 475
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 47.6 bits (108), Expect = 6e-06
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Frame = +1
Query: 259 AIMP-CIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILAPTR 405
A++P + G DV+ QA++ GKTA F + I+ +I +T + Q ALILAPTR
Sbjct: 410 AMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTR 469
Query: 406 ELAQQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
ELA QI + + + + G ++ ++ +G +++GT
Sbjct: 470 ELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGT 516
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.2 bits (107), Expect = 8e-06
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Frame = +1
Query: 256 RAIMPCIQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ---ALILAPTREL 411
+ I + GRD+I A +G+GKT TF + ++ Q++ + LI+ P+REL
Sbjct: 219 QGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSREL 278
Query: 412 AQQIQKVVIALGDHL------NAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
A+QI ++I + D L CIGG + + + G+ +VV T
Sbjct: 279 ARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVAT 329
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Frame = +1
Query: 265 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELA 414
+P I QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL
Sbjct: 583 LPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELT 642
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI GG V Q+E G ++VGT
Sbjct: 643 DQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Frame = +1
Query: 265 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELA 414
+P I QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL
Sbjct: 583 LPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELT 642
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI GG V Q+E G ++VGT
Sbjct: 643 DQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----------ALILAPTRELAQQ 420
+ G+D I +Q+G+GKT F + L ID + + + L+L+PTRELAQQ
Sbjct: 119 LSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQ 178
Query: 421 IQKVVIALGDHLNAXCXACI-GGTNVP*RYXQLESGVXVVVGT 546
I+ V N C+ GG + P + GV +V+ T
Sbjct: 179 IEGEVKKYS--YNGYKSVCLYGGGSRPEQVEACRGGVEIVIAT 219
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.4 bits (105), Expect = 1e-05
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Frame = +1
Query: 265 MPCI-QGRDVIAQAQSGTGKTATFSISILQQI--DTSIREC-------QALILAPTRELA 414
+P I QG D++A AQ+G+GKTA F + I+ ++ + + + +IL PTREL
Sbjct: 583 LPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELT 642
Query: 415 QQIQKVVIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
QI GG V Q+E G ++VGT
Sbjct: 643 DQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGT 686
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 432
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG NV Q+ G ++VGT
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGT 432
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQI----DTSIRE---C--QALILAPTRELAQQIQKV 432
G+D++A AQ+G+GKTA F + I+ ++ D + C + +IL PTRELA QI
Sbjct: 335 GKDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNE 394
Query: 433 VIALGDHLNAXCXACIGGTNVP*RYXQLESGVXVVVGT 546
GG NV Q+ G ++VGT
Sbjct: 395 GRKFSYQSVMEIKPVYGGINVGYNKSQIMKGCTIIVGT 432
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVVIALGDHL 456
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+ + L
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 457 NAXCXACIGGTNV 495
N GG V
Sbjct: 108 NLTVETVTGGQKV 120
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Frame = +1
Query: 259 AIMPC-IQGR-DVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAP 399
A++P ++ R DV+ A++G+GKT F I ++ ++ T +R +ALI+AP
Sbjct: 17 AVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAP 76
Query: 400 TRELAQQIQKVVIALGDHLNAXCXACIGG 486
TREL QI K + AL + +GG
Sbjct: 77 TRELVIQIMKHINALISTTQLIATSIVGG 105
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Frame = +1
Query: 259 AIMPC-IQGR-DVIAQAQSGTGKTATFSISILQQI-----------DTSIRECQALILAP 399
A++P ++ R DV+ A++G+GKT F I ++ ++ T +R +ALI+AP
Sbjct: 184 AVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAP 243
Query: 400 TRELAQQIQKVVIALGDHLNAXCXACIGG 486
TREL QI K + AL + +GG
Sbjct: 244 TRELVIQIMKHINALISTTQLIATSIVGG 272
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATF----SISILQQIDTSIRECQ-ALILAPTRELAQ 417
A AI + GRDV+ A++G+GKTA + + I+ Q D E A+I+ PTRELA
Sbjct: 293 AMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAI 352
Query: 418 QI 423
Q+
Sbjct: 353 QV 354
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALIL 393
+I + RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L
Sbjct: 169 SIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVL 228
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGG-TNVP*RYXQLESGVXVVVGT 546
+PTRELA QI K N GG N + +L +G +++ T
Sbjct: 229 SPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 280
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALIL 393
+I + RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L
Sbjct: 153 SIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVL 212
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGG-TNVP*RYXQLESGVXVVVGT 546
+PTRELA QI K N GG N + +L +G +++ T
Sbjct: 213 SPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 264
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 40.7 bits (91), Expect = 7e-04
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------------DTSIRECQ---ALIL 393
+I + RD+++ AQ+G+GKTA F + I+Q I T+ R AL+L
Sbjct: 150 SIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVL 209
Query: 394 APTRELAQQIQKVVIALGDHLNAXCXACIGG-TNVP*RYXQLESGVXVVVGT 546
+PTRELA QI K N GG N + +L +G +++ T
Sbjct: 210 SPTRELAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIAT 261
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 9e-04
Identities = 22/68 (32%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQI-------DTSIRECQALILAPTRELAQQIQKV 432
++ ++++ +A++G+GKT F I ++Q++ D S+ A+I+APT+EL QI K+
Sbjct: 124 LENKNIMGRARTGSGKTGAFLIPLVQKLIAESKTNDGSVGP-SAVIIAPTKELITQIYKL 182
Query: 433 VIALGDHL 456
+ L L
Sbjct: 183 FVKLSQAL 190
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +1
Query: 280 GRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQKVVIALGDHLN 459
G +A AQ+ G +S + ID+S C +IL PTREL QQ + + L+
Sbjct: 252 GTQYVAVAQAEDGNLKWWSAAEQLSIDSSTPLC--VILEPTRELVQQTFQNIQTFASVLD 309
Query: 460 AXCXACI---GGTNVP*RYXQLESGVXVVVGT 546
+ C+ G N+ LE+G +VVGT
Sbjct: 310 SPKIRCVTLAAGENMNQILRTLETGCDIVVGT 341
Score = 30.3 bits (65), Expect = 0.95
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 253 ARAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 351
+ AI + G D + A++G+GKT FS+ I Q
Sbjct: 30 SEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRE 408
+ P + G DV+A A +G+GKT F I + ++ D + + + LI+APTRE
Sbjct: 766 SFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRE 825
Query: 409 LAQQIQKVVIALGDHLNAXCXACIGG 486
L Q L C GG
Sbjct: 826 LVNQTFTTARQLTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 259 AIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQALILAPTRE 408
+ P + G DV+A A +G+GKT F I + ++ D + + + LI+APTRE
Sbjct: 766 SFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRE 825
Query: 409 LAQQIQKVVIALGDHLNAXCXACIGG 486
L Q L C GG
Sbjct: 826 LVNQTFTTARQLTYETGLKCGLAFGG 851
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 35.1 bits (77), Expect = 0.034
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 17/70 (24%)
Frame = +1
Query: 265 MPCIQG-RDVIAQAQSGTGKTATFSI----SILQQ----IDTSI-----RECQ---ALIL 393
+P +QG RD+++ AQ+G+GKTA F + +ILQ + S+ R+ Q AL+L
Sbjct: 197 IPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVL 256
Query: 394 APTRELAQQI 423
+PTREL+ QI
Sbjct: 257 SPTRELSLQI 266
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 33.9 bits (74), Expect = 0.077
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Frame = +1
Query: 283 RDVIAQAQSGTGKTATFSISILQQI----------DTSIRECQALILAPTRELAQQ 420
R+V+A A +G+GKT F++ ++ +I ++ + A++L PTRELA Q
Sbjct: 164 RNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.077
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +1
Query: 268 PCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELAQQI 423
P ++ RDV A +G+GKT + + +L + + + QA+IL P + L QI
Sbjct: 152 PPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLVAQI 204
>AC006748-6|AAF60516.1| 582|Caenorhabditis elegans Hypothetical
protein Y39A3B.5a protein.
Length = 582
Score = 31.5 bits (68), Expect = 0.41
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 131 PFPEVHRNYLDPSMAHFWNPLANLLTFFQTNKT 33
P P + + D FWN L+N LTF Q +KT
Sbjct: 338 PPPAIVASMTDEQKLSFWNKLSNKLTFSQQDKT 370
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 289 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 426
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIR 127
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +1
Query: 286 DVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQI 423
+VI A +G+GKTA +++L+ + + E +A+ + P ++A ++
Sbjct: 1339 NVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPMEDMATKV 1383
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 289 VIAQAQSGTGKTATFSISILQQIDTSIREC 378
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>AC006748-5|AAX55685.1| 471|Caenorhabditis elegans Hypothetical
protein Y39A3B.5c protein.
Length = 471
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 101 DPSMAHFWNPLANLLTFFQTNKT 33
D FWN L+N LTF Q +KT
Sbjct: 237 DEQKLSFWNKLSNKLTFSQQDKT 259
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 44 SERRSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETFDD 184
SER +W +D ++GP ++ QG + + PG D T+D W + VE +D+
Sbjct: 63 SERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELYDE 108
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 400 WEPGSKLDIHECLYRFVVESI*RK 329
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 444
+QG++ I A +G+GKT + I + ++ E +AL + P + Q + +
Sbjct: 305 LQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAASISSY 364
Query: 445 GDHLNAXCXACIGGTNVP*R 504
DH+ G NVP R
Sbjct: 365 LDHV-YHTQIIQGSDNVPTR 383
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 274 IQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE---CQALILAPTRELAQQIQKVVIAL 444
+QG++ I A +G+GKT + I + ++ E +AL + P + Q + +
Sbjct: 305 LQGKNTIVTAPTGSGKTVIAANIIKEHFESRSSEGKRFKALFMTPNSMILNQQAASISSY 364
Query: 445 GDHLNAXCXACIGGTNVP*R 504
DH+ G NVP R
Sbjct: 365 LDHV-YHTQIIQGSDNVPTR 383
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 382 ALILAPTRELAQQIQKVVIALGDHL 456
A+I+APT+EL QI K+ + L L
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQAL 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,899,757
Number of Sequences: 27780
Number of extensions: 273988
Number of successful extensions: 852
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -