Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0265.Seq
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    23   5.4  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    22   7.2  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   9.5  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 171 QKQELQRVQQAGRYLQPMK 227
           Q QE Q+ Q+  +YLQP +
Sbjct: 262 QPQEFQQQQRQPQYLQPQQ 280


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 208 RPACCTRCSSCFWSTPCSRRMVCPG 134
           R + C RC+      PC+R   C G
Sbjct: 232 RSSKCHRCAEDKHEGPCTRERKCLG 256


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -1

Query: 156 QEEWSAQVQDEWSTTAAAPACLPPQRPRGVDP 61
           +EE   + QD+W+T A  P   P  + R + P
Sbjct: 865 REETMRRWQDQWTTGAGQPGA-PGLKTRRLIP 895


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,853
Number of Sequences: 2352
Number of extensions: 4328
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)