Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0265.Seq
(399 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150204-1|AAI50205.1| 450|Homo sapiens ANKS1B protein protein. 31 1.4
BC026313-1|AAH26313.2| 510|Homo sapiens ankyrin repeat and ster... 31 1.4
AY753193-1|AAV28691.1| 426|Homo sapiens AIDA1C transcript varia... 31 1.4
AY620824-1|AAT39519.1| 768|Homo sapiens AIDA-1bDelta Ank-2 prot... 31 1.4
AY283057-1|AAP38184.2| 750|Homo sapiens AIDA-1bDAnk protein. 31 1.4
AY281132-1|AAP37613.1| 460|Homo sapiens AIDA-1a protein. 31 1.4
AY281131-1|AAP37612.1| 1249|Homo sapiens AIDA-1b protein. 31 1.4
AF164792-1|AAF80756.1| 414|Homo sapiens putative 47 kDa protein... 31 1.4
AF145204-1|AAD33951.1| 955|Homo sapiens E2a-Pbx1-associated pro... 31 1.4
AB044584-1|BAA96740.1| 270|Homo sapiens potassium channel-inter... 31 1.9
DQ148480-1|AAZ77797.1| 270|Homo sapiens potassium channel inter... 29 7.5
AF367021-1|AAK53710.1| 270|Homo sapiens KCHIP2.4 protein. 29 7.5
BC142669-1|AAI42670.1| 414|Homo sapiens ankyrin repeat and ster... 28 9.9
>BC150204-1|AAI50205.1| 450|Homo sapiens ANKS1B protein protein.
Length = 450
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 37 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 95
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 96 IQLLPKMRPI 105
>BC026313-1|AAH26313.2| 510|Homo sapiens ankyrin repeat and sterile
alpha motif domain containing 1B protein.
Length = 510
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 37 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 95
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 96 IQLLPKMRPI 105
>AY753193-1|AAV28691.1| 426|Homo sapiens AIDA1C transcript variant
4 protein.
Length = 426
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 37 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 95
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 96 IQLLPKMRPI 105
>AY620824-1|AAT39519.1| 768|Homo sapiens AIDA-1bDelta Ank-2
protein.
Length = 768
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 387 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 445
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 446 IQLLPKMRPI 455
>AY283057-1|AAP38184.2| 750|Homo sapiens AIDA-1bDAnk protein.
Length = 750
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 373 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 431
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 432 IQLLPKMRPI 441
>AY281132-1|AAP37613.1| 460|Homo sapiens AIDA-1a protein.
Length = 460
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 37 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 95
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 96 IQLLPKMRPI 105
>AY281131-1|AAP37612.1| 1249|Homo sapiens AIDA-1b protein.
Length = 1249
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 812 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 870
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 871 IQLLPKMRPI 880
>AF164792-1|AAF80756.1| 414|Homo sapiens putative 47 kDa protein
protein.
Length = 414
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 37 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 95
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 96 IQLLPKMRPI 105
>AF145204-1|AAD33951.1| 955|Homo sapiens E2a-Pbx1-associated
protein protein.
Length = 955
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LLE G+L QR+ QA
Sbjct: 518 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLEIGILNSGHRQRILQA 576
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 577 IQLLPKMRPI 586
>AB044584-1|BAA96740.1| 270|Homo sapiens potassium
channel-interacting protein 2b protein.
Length = 270
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1
Query: 138 QVQDEWSTTAAAPACLPPQRPRGVDP 61
QV S T AAPA L P RPR +DP
Sbjct: 49 QVLPSVSETLAAPASLRPHRPRPLDP 74
>DQ148480-1|AAZ77797.1| 270|Homo sapiens potassium channel
interacting protein 2 protein.
Length = 270
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 120 STTAAAPACLPPQRPRGVDP 61
S T AAPA L P RPR +DP
Sbjct: 55 SETLAAPASLRPHRPRLLDP 74
>AF367021-1|AAK53710.1| 270|Homo sapiens KCHIP2.4 protein.
Length = 270
Score = 28.7 bits (61), Expect = 7.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1
Query: 120 STTAAAPACLPPQRPRGVDP 61
S T AAPA L P RPR +DP
Sbjct: 55 SETLAAPASLRPHRPRLLDP 74
>BC142669-1|AAI42670.1| 414|Homo sapiens ankyrin repeat and sterile
alpha motif domain containing 1B protein.
Length = 414
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 24 PVQSIYAAXQS*ADPPHEGAAXAGRLVRRQLCSTHLVPGQTILLEQGVLQKQELQRVQQA 203
PVQ++ +S P +E A Q ++++ Q LL G+L QR+ QA
Sbjct: 37 PVQTVGQWLESIGLPQYENHLMANGFDNVQFMGSNVMEDQD-LLGIGILNSGHRQRILQA 95
Query: 204 GRYLQPMKPL 233
+ L M+P+
Sbjct: 96 IQLLPKMRPI 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,351,012
Number of Sequences: 237096
Number of extensions: 768645
Number of successful extensions: 2103
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -