Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0264.Seq
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK098423-1|BAC05305.1|  485|Homo sapiens protein ( Homo sapiens ...    31   1.1  
AK055979-1|BAB71063.1|  710|Homo sapiens protein ( Homo sapiens ...    30   2.5  
BC030023-1|AAH30023.1|  440|Homo sapiens glycosyltransferase 8 d...    30   3.3  
AK098749-1|BAC05403.1|  141|Homo sapiens protein ( Homo sapiens ...    29   7.5  

>AK098423-1|BAC05305.1|  485|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25557 fis, clone JTH02756. ).
          Length = 485

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +1

Query: 28  AVAALMDTVPTVVMEVYHPPAVPVTLVQTQTAQDPVHLVVAALMDTVPTVVMKVYHPPAV 207
           +V  ++ T+PT++M     P V VT++QT  A        A     VP+ V     P  +
Sbjct: 384 SVMLILRTMPTLMMRTEDRPKVAVTMIQTAAAMGVASGAGATAAAPVPSPVAASTRPRRM 443

Query: 208 PVTL 219
            V L
Sbjct: 444 AVKL 447


>AK055979-1|BAB71063.1|  710|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31417 fis, clone NT2NE2000327, weakly similar to
           GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
          Length = 710

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +1

Query: 55  PTVVMEVYHPPAVPVTLVQTQTAQDPVHLVVAA-LMDTVPTVVMKVYHPPAVPVTLIR 225
           P V      PPAV  T+  T+ AQ PV    AA   D+     + + HPP+  +++ R
Sbjct: 251 PPVTTSNAIPPAVVATVSATR-AQSPVITTTAAHATDSALRPTLSIQHPPSAAISIQR 307


>BC030023-1|AAH30023.1|  440|Homo sapiens glycosyltransferase 8
           domain containing 3 protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 123 RCLSLNQCYWNCRWMIHFHHDCWNCIHKCCYR 28
           RC   + CYWN  WM+       NC  +  +R
Sbjct: 74  RCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105



 Score = 28.3 bits (60), Expect = 9.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -2

Query: 350 RCLSLXXCYWNSRWSIHFHHDSXNCLHESXNR 255
           RC     CYWN  W +       NC  E+  R
Sbjct: 74  RCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105


>AK098749-1|BAC05403.1|  141|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25883 fis, clone CBR02735. ).
          Length = 141

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -1

Query: 186 FHHDCWNCIHKCCYHQMYWILRCL--SLNQCYW 94
           +H  C    HK  +H++ W++ CL    +Q YW
Sbjct: 54  YHGVCRELAHKETWHRLSWLVACLWVHYDQGYW 86


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,452,707
Number of Sequences: 237096
Number of extensions: 781247
Number of successful extensions: 1665
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)