Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0263.Seq
         (359 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   2.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   2.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   2.2  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    20   6.7  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    20   8.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  TQIIQGQCFNLLTHLYFFNNNFNW 122
           T +++ +C+ +   +  FN+ F W
Sbjct: 257 TTVVEKECYKMKVTIDAFNDIFGW 280


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  TQIIQGQCFNLLTHLYFFNNNFNW 122
           T +++ +C+ +   +  FN+ F W
Sbjct: 183 TTVVEKECYKMKVTIDAFNDIFGW 206


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 54  QIIQGQCFNLLTHLYFFNNNFNW 122
           Q+I+ Q ++L   +  FN+ F W
Sbjct: 179 QVIKAQIYSLRETVDVFNDIFGW 201


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 54  QIIQGQCFNLLTHLYFFNNNFNW 122
           Q+I+ Q ++L   +  FN+ F W
Sbjct: 179 QVIKAQIYSLRETVDVFNDIFGW 201


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 54  QIIQGQCFNLLTHLYFFNNNFNW 122
           Q+I+ Q ++L   +  FN+ F W
Sbjct: 499 QVIKAQIYSLRETVDVFNDIFGW 521


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 252 CIVRELLPPKNRTDSLRLT*GIIFF 178
           C+V  +     RTD+ R+T  ++F+
Sbjct: 55  CLVLNVYTKNLRTDTNRITQPVLFW 79


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 190 SLSQSKRISPIFGG 231
           S+S  KR+ P +GG
Sbjct: 49  SVSYDKRVRPNYGG 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,848
Number of Sequences: 336
Number of extensions: 998
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)