Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0263.Seq
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   2.0  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        22   6.1  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    22   8.0  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +3

Query: 21  GTHLR*IFKPTQIIQGQCFNLLTHLYFFNNNFNWLQA 131
           G  L   + P  ++ G   N+L+ L FFN     L +
Sbjct: 38  GNFLNFYYMPLLVVVGSIGNILSVLVFFNTKLKKLSS 74


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 242 GNCFPPKIGL 213
           GNC+PP  GL
Sbjct: 152 GNCYPPSEGL 161


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +3

Query: 9   YFIKGTHLR*IFKPTQIIQGQCFNLLTHLYFFNNNFNW 122
           Y +  +HLR    P ++ +     ++T L+  +N+F+W
Sbjct: 380 YQVVTSHLRGSRTPPELDREVLERIVTDLFPDHNSFDW 417


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,216
Number of Sequences: 2352
Number of extensions: 3574
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)