Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0263.Seq
         (359 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57436-1|CAA40684.1|  440|Homo sapiens oligodentrocyte-myelin gl...    30   2.5  
X51694-1|CAA35991.1|  433|Homo sapiens oligodendrocyte-myelin gl...    30   2.5  
M63623-1|AAA59970.1|  440|Homo sapiens oligodendrocyte-myelin gl...    30   2.5  
BC018050-1|AAH18050.1|  440|Homo sapiens oligodendrocyte myelin ...    30   2.5  
AK222663-1|BAD96383.1|  440|Homo sapiens oligodendrocyte myelin ...    30   2.5  

>X57436-1|CAA40684.1|  440|Homo sapiens oligodentrocyte-myelin
           glycoprotein protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 51  TQIIQGQCFNL--LTHLYFFNNNFNWL 125
           TQI+ G   NL  LTHLY  NN F ++
Sbjct: 180 TQILPGTLINLTNLTHLYLHNNKFTFI 206


>X51694-1|CAA35991.1|  433|Homo sapiens oligodendrocyte-myelin
           glycoprotein protein.
          Length = 433

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 51  TQIIQGQCFNL--LTHLYFFNNNFNWL 125
           TQI+ G   NL  LTHLY  NN F ++
Sbjct: 173 TQILPGTLINLTNLTHLYLHNNKFTFI 199


>M63623-1|AAA59970.1|  440|Homo sapiens oligodendrocyte-myelin
           glycoprotein protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 51  TQIIQGQCFNL--LTHLYFFNNNFNWL 125
           TQI+ G   NL  LTHLY  NN F ++
Sbjct: 180 TQILPGTLINLTNLTHLYLHNNKFTFI 206


>BC018050-1|AAH18050.1|  440|Homo sapiens oligodendrocyte myelin
           glycoprotein protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 51  TQIIQGQCFNL--LTHLYFFNNNFNWL 125
           TQI+ G   NL  LTHLY  NN F ++
Sbjct: 180 TQILPGTLINLTNLTHLYLHNNKFTFI 206


>AK222663-1|BAD96383.1|  440|Homo sapiens oligodendrocyte myelin
           glycoprotein variant protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
 Frame = +3

Query: 51  TQIIQGQCFNL--LTHLYFFNNNFNWL 125
           TQI+ G   NL  LTHLY  NN F ++
Sbjct: 180 TQILPGTLINLTNLTHLYLHNNKFTFI 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,948,737
Number of Sequences: 237096
Number of extensions: 558969
Number of successful extensions: 431
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)