Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0263.Seq
(359 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 5.9
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 5.9
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 5.9
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 5.9
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 20 7.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 7.7
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NSLSNNYNYNNNYN 99
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 319 NSLSNNYNYNNNYN 332
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 319 NSLSNNYNYNNNYN 332
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.2 bits (40), Expect = 7.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 78 NLLTHLYFFNNNFN 119
N L++ Y +NNN+N
Sbjct: 86 NPLSNNYNYNNNYN 99
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.2 bits (40), Expect = 7.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 246 VRELLPPKNRTDSLRLT*GI 187
+RE LPP +T + L G+
Sbjct: 262 IRESLPPTEKTPLISLYYGV 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,564
Number of Sequences: 438
Number of extensions: 1079
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8432340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -