Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0262.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19052-1|CAA79496.1| 151|Drosophila melanogaster ribosomal prot... 157 6e-39
X91854-1|CAA62965.1| 151|Drosophila melanogaster ribosomal prot... 157 6e-39
X91853-1|CAA62964.1| 151|Drosophila melanogaster ribosomal prot... 157 6e-39
AY058536-1|AAL13765.1| 151|Drosophila melanogaster LD23958p pro... 157 6e-39
AE014134-1471|ABC65883.1| 151|Drosophila melanogaster CG13389-P... 157 6e-39
AE014134-1470|AAF52649.1| 151|Drosophila melanogaster CG13389-P... 157 6e-39
BT004846-1|AAO45202.1| 769|Drosophila melanogaster RE70136p pro... 29 3.5
AF106952-1|AAD19607.1| 769|Drosophila melanogaster serine/threo... 29 3.5
AE014296-3553|AAF51737.1| 769|Drosophila melanogaster CG7186-PA... 29 3.5
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 28 6.1
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 28 6.1
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 28 6.1
>Z19052-1|CAA79496.1| 151|Drosophila melanogaster ribosomal protein
S17 protein.
Length = 151
Score = 157 bits (382), Expect = 6e-39
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 270 NWQKDLRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 91
N K LRIMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLA
Sbjct: 67 NGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLA 126
Query: 90 RYYKTKSVLPPNWKYESSTASALVA 16
RYYKTKSVLPPNWKYESSTASALVA
Sbjct: 127 RYYKTKSVLPPNWKYESSTASALVA 151
Score = 109 bits (261), Expect = 3e-24
Identities = 51/67 (76%), Positives = 57/67 (85%)
Frame = -3
Query: 455 HAPGKGISQSALPNRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 276
HAPGKGISQSALP RR+VP+WLKL ADDVKEQI K G++G QIG++LRDSHGVAQVR
Sbjct: 5 HAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSLQIGIILRDSHGVAQVR 64
Query: 275 FVTGKKI 255
FV G KI
Sbjct: 65 FVNGNKI 71
>X91854-1|CAA62965.1| 151|Drosophila melanogaster ribosomal protein
S13 protein.
Length = 151
Score = 157 bits (382), Expect = 6e-39
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 270 NWQKDLRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 91
N K LRIMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLA
Sbjct: 67 NGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLA 126
Query: 90 RYYKTKSVLPPNWKYESSTASALVA 16
RYYKTKSVLPPNWKYESSTASALVA
Sbjct: 127 RYYKTKSVLPPNWKYESSTASALVA 151
Score = 123 bits (296), Expect = 2e-28
Identities = 57/67 (85%), Positives = 62/67 (92%)
Frame = -3
Query: 455 HAPGKGISQSALPNRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 276
HAPGKGISQSALP RR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVR
Sbjct: 5 HAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVR 64
Query: 275 FVTGKKI 255
FV G KI
Sbjct: 65 FVNGNKI 71
>X91853-1|CAA62964.1| 151|Drosophila melanogaster ribosomal protein
S13 protein.
Length = 151
Score = 157 bits (382), Expect = 6e-39
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 270 NWQKDLRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 91
N K LRIMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLA
Sbjct: 67 NGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLA 126
Query: 90 RYYKTKSVLPPNWKYESSTASALVA 16
RYYKTKSVLPPNWKYESSTASALVA
Sbjct: 127 RYYKTKSVLPPNWKYESSTASALVA 151
Score = 123 bits (296), Expect = 2e-28
Identities = 57/67 (85%), Positives = 62/67 (92%)
Frame = -3
Query: 455 HAPGKGISQSALPNRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 276
HAPGKGISQSALP RR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVR
Sbjct: 5 HAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVR 64
Query: 275 FVTGKKI 255
FV G KI
Sbjct: 65 FVNGNKI 71
>AY058536-1|AAL13765.1| 151|Drosophila melanogaster LD23958p
protein.
Length = 151
Score = 157 bits (382), Expect = 6e-39
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 270 NWQKDLRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 91
N K LRIMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLA
Sbjct: 67 NGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLA 126
Query: 90 RYYKTKSVLPPNWKYESSTASALVA 16
RYYKTKSVLPPNWKYESSTASALVA
Sbjct: 127 RYYKTKSVLPPNWKYESSTASALVA 151
Score = 123 bits (296), Expect = 2e-28
Identities = 57/67 (85%), Positives = 62/67 (92%)
Frame = -3
Query: 455 HAPGKGISQSALPNRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 276
HAPGKGISQSALP RR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVR
Sbjct: 5 HAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVR 64
Query: 275 FVTGKKI 255
FV G KI
Sbjct: 65 FVNGNKI 71
>AE014134-1471|ABC65883.1| 151|Drosophila melanogaster CG13389-PB,
isoform B protein.
Length = 151
Score = 157 bits (382), Expect = 6e-39
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 270 NWQKDLRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 91
N K LRIMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLA
Sbjct: 67 NGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLA 126
Query: 90 RYYKTKSVLPPNWKYESSTASALVA 16
RYYKTKSVLPPNWKYESSTASALVA
Sbjct: 127 RYYKTKSVLPPNWKYESSTASALVA 151
Score = 123 bits (296), Expect = 2e-28
Identities = 57/67 (85%), Positives = 62/67 (92%)
Frame = -3
Query: 455 HAPGKGISQSALPNRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 276
HAPGKGISQSALP RR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVR
Sbjct: 5 HAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVR 64
Query: 275 FVTGKKI 255
FV G KI
Sbjct: 65 FVNGNKI 71
>AE014134-1470|AAF52649.1| 151|Drosophila melanogaster CG13389-PA,
isoform A protein.
Length = 151
Score = 157 bits (382), Expect = 6e-39
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 270 NWQKDLRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLA 91
N K LRIMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLA
Sbjct: 67 NGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLA 126
Query: 90 RYYKTKSVLPPNWKYESSTASALVA 16
RYYKTKSVLPPNWKYESSTASALVA
Sbjct: 127 RYYKTKSVLPPNWKYESSTASALVA 151
Score = 123 bits (296), Expect = 2e-28
Identities = 57/67 (85%), Positives = 62/67 (92%)
Frame = -3
Query: 455 HAPGKGISQSALPNRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 276
HAPGKGISQSALP RR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVR
Sbjct: 5 HAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVR 64
Query: 275 FVTGKKI 255
FV G KI
Sbjct: 65 FVNGNKI 71
>BT004846-1|AAO45202.1| 769|Drosophila melanogaster RE70136p
protein.
Length = 769
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 341 KGLTPSQIGVMLRDSHGVAQVRFVTGKKISV 249
K + +IG+ SHGV QV+F G +SV
Sbjct: 662 KRINVPEIGIATELSHGVVQVQFYDGSVVSV 692
>AF106952-1|AAD19607.1| 769|Drosophila melanogaster
serine/threonine kinase protein.
Length = 769
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 341 KGLTPSQIGVMLRDSHGVAQVRFVTGKKISV 249
K + +IG+ SHGV QV+F G +SV
Sbjct: 662 KRINVPEIGIATELSHGVVQVQFYDGSVVSV 692
>AE014296-3553|AAF51737.1| 769|Drosophila melanogaster CG7186-PA
protein.
Length = 769
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 341 KGLTPSQIGVMLRDSHGVAQVRFVTGKKISV 249
K + +IG+ SHGV QV+F G +SV
Sbjct: 662 KRINVPEIGIATELSHGVVQVQFYDGSVVSV 692
>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
EG:95B7.8,FBgn0000928;fs(1)Yb protein.
Length = 1042
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 294 WSCPSKIRNWQKDLRIMKAMGLAPDL-----PEDLYYLIKKAVAMRKHLERNRKDKDSKF 130
+SC ++ ++ ++ +GL P+ P+D L++K R H +RNR +F
Sbjct: 930 YSCDKIFKDSPREAMDLRILGLQPESLDRIWPDDARNLVRKDFFRRTHNKRNR-----QF 984
Query: 129 RLILVESRIHR 97
+ V+S IHR
Sbjct: 985 HAV-VQSAIHR 994
>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB protein.
Length = 1042
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 294 WSCPSKIRNWQKDLRIMKAMGLAPDL-----PEDLYYLIKKAVAMRKHLERNRKDKDSKF 130
+SC ++ ++ ++ +GL P+ P+D L++K R H +RNR +F
Sbjct: 930 YSCDKIFKDSPREAMDLRILGLQPESLDRIWPDDARNLVRKDFFRRTHNKRNR-----QF 984
Query: 129 RLILVESRIHR 97
+ V+S IHR
Sbjct: 985 HAV-VQSAIHR 994
>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
protein.
Length = 1042
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 294 WSCPSKIRNWQKDLRIMKAMGLAPDL-----PEDLYYLIKKAVAMRKHLERNRKDKDSKF 130
+SC ++ ++ ++ +GL P+ P+D L++K R H +RNR +F
Sbjct: 930 YSCDKIFKDSPREAMDLRILGLQPESLDRIWPDDARNLVRKDFFRRTHNKRNR-----QF 984
Query: 129 RLILVESRIHR 97
+ V+S IHR
Sbjct: 985 HAV-VQSAIHR 994
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,134,959
Number of Sequences: 53049
Number of extensions: 411633
Number of successful extensions: 1043
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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