Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0261.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    25   0.50 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    25   0.50 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   2.0  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.0  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   2.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   2.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   2.7  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   3.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.2  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 223 KAVGVVENPDRRDSQ*CTRKQRLPESPLKT*SAVHSRLV 339
           +A+  + +  R++SQ  TR Q +P   +KT   +HS LV
Sbjct: 192 EAINNIIDSIRQNSQ--TRNQAVPTGTIKTLVQMHSNLV 228


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 223 KAVGVVENPDRRDSQ*CTRKQRLPESPLKT*SAVHSRLV 339
           +A+  + +  R++SQ  TR Q +P   +KT   +HS LV
Sbjct: 192 EAINNIIDSIRQNSQ--TRNQAVPTGTIKTLVQMHSNLV 228


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
 Frame = +1

Query: 205 NGLIHKKAVGVVENPDRRDSQ*CTRKQRLP-ESPL--KT*SAVHSRLVPGGHC 354
           NGL++    G+   PD    + C+ ++    E P   +T +A H R      C
Sbjct: 140 NGLVYNDKAGICSWPDEAKKKGCSSEEVFQFECPKVNETVAATHPRYADPDDC 192


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 KRNIKKPFSKEPNNVT 183
           +RNIK  FS +PNNVT
Sbjct: 170 QRNIKY-FSGDPNNVT 184


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 KRNIKKPFSKEPNNVT 183
           +RN+K  FS +PNNVT
Sbjct: 168 QRNVKY-FSGDPNNVT 182


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 KRNIKKPFSKEPNNVT 183
           +RN+K  FS +PNNVT
Sbjct: 170 QRNVKY-FSGDPNNVT 184


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 136 KRNIKKPFSKEPNNVT 183
           +RN+K  FS +PNNVT
Sbjct: 168 QRNVKY-FSGDPNNVT 182


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 46  TTCSQCVRRQKGCER 2
           T+CS+C +RQK   R
Sbjct: 71  TSCSKCSQRQKDGSR 85


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 41  RCVWCRNRF 67
           +CVWC+  F
Sbjct: 379 KCVWCKQSF 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,914
Number of Sequences: 336
Number of extensions: 2242
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)