Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0261.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    25   1.4  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.9  
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    24   3.3  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   7.6  

>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
          protein.
          Length = 375

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 67 KPISTPNTTCSQCVR 23
          KP +TPN T  +CVR
Sbjct: 28 KPCTTPNGTAGRCVR 42


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 84  VVTELDDHPQQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQ 221
           V  +L    QQQ  P ++ Q Q+  QQ   +   PP L+ QR   Q
Sbjct: 265 VPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQ 310


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 405 CISLCGSG*PLTTSSLCTVTS 343
           C S CGSG P  T   C   S
Sbjct: 12  CTSGCGSGQPCATDCKCACAS 32


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 397 SVRXWXAFNNLFTLYSDLLAPALN 326
           +V+ W A NN+ T+    L+P LN
Sbjct: 163 TVQTWLADNNVKTMKWPALSPDLN 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,906
Number of Sequences: 2352
Number of extensions: 10430
Number of successful extensions: 56
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)