Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0261.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 66 5e-11
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 66 5e-11
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 66 5e-11
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 66 5e-11
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 66 5e-11
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 66 5e-11
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 44 4e-04
Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 29 9.0
X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 29 9.0
S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 29 9.0
BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 29 9.0
BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 29 9.0
BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 29 9.0
BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 29 9.0
BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 29 9.0
BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 29 9.0
BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 29 9.0
BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 29 9.0
AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 29 9.0
AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 29 9.0
AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 29 9.0
AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 29 9.0
AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 29 9.0
AJ488539-1|CAD32733.1| 117|Homo sapiens immunoglobulin heavy ch... 29 9.0
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.5 bits (155), Expect = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 79 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 237
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGV 51
Score = 61.3 bits (142), Expect = 2e-09
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +3
Query: 255 KGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASAI 434
KG VV K+ RKPA + +R AR +L ++ +++ R DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 435 LRSQRPIKAKKAXT 476
LR+Q+P+ K+ T
Sbjct: 118 LRTQKPVMVKRKRT 131
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 66.5 bits (155), Expect = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 79 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 237
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGV 51
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +3
Query: 255 KGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASAI 434
KG VV K+ RKPA + +R AR +L ++ +++ R DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 435 LRSQRPIKAKKAXT 476
LRSQ+P+ K+ T
Sbjct: 118 LRSQKPVMVKRKRT 131
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.5 bits (155), Expect = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 79 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 237
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGV 51
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +3
Query: 255 KGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASAI 434
KG VV K+ RKPA + +R AR +L ++ +++ R DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 435 LRSQRPIKAKKAXT 476
LRSQ+P+ K+ T
Sbjct: 118 LRSQKPVMVKRKRT 131
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.5 bits (155), Expect = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 79 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 237
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGV 51
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +3
Query: 255 KGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASAI 434
KG VV K+ RKPA + +R AR +L ++ +++ R DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 435 LRSQRPIKAKKAXT 476
LRSQ+P+ K+ T
Sbjct: 118 LRSQKPVMVKRKRT 131
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 66.5 bits (155), Expect = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 79 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 237
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGV 51
Score = 62.5 bits (145), Expect = 8e-10
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +3
Query: 255 KGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASAI 434
KG VV K+ RKPA + +R AR +L ++ +++ R DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 435 LRSQRPIKAKKAXT 476
LRSQ+P+ K+ T
Sbjct: 118 LRSQKPVMVKRKRT 131
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 66.5 bits (155), Expect = 5e-11
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +1
Query: 79 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 237
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGV 59
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 43.6 bits (98), Expect = 4e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +3
Query: 315 IRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASAILRSQRPIKAK 464
+R AR +L ++ +++ R DL A +RRASAILRSQ+P+ K
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPVMVK 53
>Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein.
Length = 258
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75
>BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing
protein 43 protein.
Length = 233
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein
protein.
Length = 112
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 9.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 112 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 207
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AJ488539-1|CAD32733.1| 117|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 117
Score = 29.1 bits (62), Expect = 9.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 413 GSLA*VCAXVXSL*QPLHFVQ*PPGTSLEWTA 318
GSL CA +H+V+ PPG LEW A
Sbjct: 16 GSLRLSCAAAGLSNTGMHWVRQPPGKGLEWVA 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,166,886
Number of Sequences: 237096
Number of extensions: 1479397
Number of successful extensions: 9844
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9838
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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