Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0261.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY102656-1|AAM27485.1| 236|Drosophila melanogaster GH04183p pro... 94 8e-20
AY071444-1|AAL49066.1| 144|Drosophila melanogaster RE52852p pro... 94 8e-20
AE014296-607|AAF47743.1| 165|Drosophila melanogaster CG12740-PC... 94 8e-20
AE014296-606|AAN11547.1| 144|Drosophila melanogaster CG12740-PD... 94 8e-20
AE014296-605|AAF47742.1| 144|Drosophila melanogaster CG12740-PB... 94 8e-20
AE014296-604|AAN11546.1| 144|Drosophila melanogaster CG12740-PA... 94 8e-20
BT022090-1|AAY33506.2| 767|Drosophila melanogaster GH26310p pro... 28 8.1
BT014923-1|AAT47774.1| 767|Drosophila melanogaster AT19737p pro... 28 8.1
>AY102656-1|AAM27485.1| 236|Drosophila melanogaster GH04183p
protein.
Length = 236
Score = 94.3 bits (224), Expect = 8e-20
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 82 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRRD 261
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D++
Sbjct: 96 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 155
Query: 262 SQ*CTRKQRLPESPLK 309
+K + + P K
Sbjct: 156 FTAVLKKGKYAQRPAK 171
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 QKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASA 431
+KGFT V KK K ++PAKN +R FKAG RRSL K+K LL R DL +A LRRASA
Sbjct: 153 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASA 212
Query: 432 ILRSQR--PIKAKKAXTAR 482
+LRSQ+ P+K KKA A+
Sbjct: 213 VLRSQKPAPVKGKKAEFAK 231
>AY071444-1|AAL49066.1| 144|Drosophila melanogaster RE52852p
protein.
Length = 144
Score = 94.3 bits (224), Expect = 8e-20
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 82 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRRD 261
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D++
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 262 SQ*CTRKQRLPESPLK 309
+K + + P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 QKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASA 431
+KGFT V KK K ++PAKN +R FKAG RRSL K+K LL R DL +A LRRASA
Sbjct: 61 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASA 120
Query: 432 ILRSQR--PIKAKKAXTAR 482
+LRSQ+ P+K KKA A+
Sbjct: 121 VLRSQKPAPVKGKKAEFAK 139
>AE014296-607|AAF47743.1| 165|Drosophila melanogaster CG12740-PC,
isoform C protein.
Length = 165
Score = 94.3 bits (224), Expect = 8e-20
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 82 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRRD 261
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D++
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 262 SQ*CTRKQRLPESPLK 309
+K + + P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +3
Query: 252 QKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXL 416
+KGFT V KK K ++PAKN +R FKAG RRSL K+K LL R DL + +
Sbjct: 61 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQVIM 115
>AE014296-606|AAN11547.1| 144|Drosophila melanogaster CG12740-PD,
isoform D protein.
Length = 144
Score = 94.3 bits (224), Expect = 8e-20
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 82 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRRD 261
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D++
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 262 SQ*CTRKQRLPESPLK 309
+K + + P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 QKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASA 431
+KGFT V KK K ++PAKN +R FKAG RRSL K+K LL R DL +A LRRASA
Sbjct: 61 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASA 120
Query: 432 ILRSQR--PIKAKKAXTAR 482
+LRSQ+ P+K KKA A+
Sbjct: 121 VLRSQKPAPVKGKKAEFAK 139
>AE014296-605|AAF47742.1| 144|Drosophila melanogaster CG12740-PB,
isoform B protein.
Length = 144
Score = 94.3 bits (224), Expect = 8e-20
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 82 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRRD 261
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D++
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 262 SQ*CTRKQRLPESPLK 309
+K + + P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 QKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASA 431
+KGFT V KK K ++PAKN +R FKAG RRSL K+K LL R DL +A LRRASA
Sbjct: 61 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASA 120
Query: 432 ILRSQR--PIKAKKAXTAR 482
+LRSQ+ P+K KKA A+
Sbjct: 121 VLRSQKPAPVKGKKAEFAK 139
>AE014296-604|AAN11546.1| 144|Drosophila melanogaster CG12740-PA,
isoform A protein.
Length = 144
Score = 94.3 bits (224), Expect = 8e-20
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 82 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRRD 261
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D++
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 262 SQ*CTRKQRLPESPLK 309
+K + + P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
Score = 85.0 bits (201), Expect = 5e-17
Identities = 45/79 (56%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Frame = +3
Query: 252 QKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKAXHXRTDLCKAXLRRASA 431
+KGFT V KK K ++PAKN +R FKAG RRSL K+K LL R DL +A LRRASA
Sbjct: 61 KKGFTAVLKKGKYAQRPAKNTVRVDFKAGPRRSLKKLKNLLIGSKYRKDLTQAALRRASA 120
Query: 432 ILRSQR--PIKAKKAXTAR 482
+LRSQ+ P+K KKA A+
Sbjct: 121 VLRSQKPAPVKGKKAEFAK 139
>BT022090-1|AAY33506.2| 767|Drosophila melanogaster GH26310p
protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 9 HPFCLRTHCEHVVFGVEIGLNRKNVVVTELDDHPQQQCIPCEEAQ 143
+P + H H++ GV +GL + E+ +HP + CE A+
Sbjct: 268 NPESRKRHVAHLMTGVRLGLMTPKCFMEEVKEHP--YVLECEAAK 310
>BT014923-1|AAT47774.1| 767|Drosophila melanogaster AT19737p
protein.
Length = 767
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 9 HPFCLRTHCEHVVFGVEIGLNRKNVVVTELDDHPQQQCIPCEEAQ 143
+P + H H++ GV +GL + E+ +HP + CE A+
Sbjct: 268 NPESRKRHVAHLMTGVRLGLMTPKCFMEEVKEHP--YVLECEAAK 310
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,478,581
Number of Sequences: 53049
Number of extensions: 442765
Number of successful extensions: 1227
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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