Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0259.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.1  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 280 INLMTIXLYGKWRR 321
           INLM    +GKW R
Sbjct: 274 INLMAYDFHGKWER 287



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 280 INLMTIXLYGKWRRPI 327
           IN+MT   +G+W R +
Sbjct: 703 INVMTYDFHGQWERTV 718


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 269 MRKVSPLGYFLWC*LKSLVYADK 201
           +R +S LG+F W  L+    A K
Sbjct: 562 IRPISTLGWFFWSLLRIYELARK 584


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,339
Number of Sequences: 336
Number of extensions: 2796
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)