Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0253.Seq
(499 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0442 - 3369827-3370168,3370608-3372616,3372953-3373277,337... 34 0.055
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 33 0.13
01_01_0850 - 6641980-6642163,6642791-6644091 33 0.13
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 33 0.17
05_04_0125 - 18241542-18242129 32 0.22
01_06_1742 - 39585879-39585994,39586089-39586238,39586288-395863... 32 0.22
04_03_0357 + 14852584-14853058,14853116-14855754 32 0.29
02_05_0309 + 27762613-27763070,27763940-27764060,27764168-277642... 32 0.29
09_04_0507 + 18194320-18195081 31 0.51
09_03_0211 + 13511893-13512259,13512563-13513038 29 2.1
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 29 2.1
11_06_0185 + 21018045-21022307 29 2.7
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 29 2.7
04_01_0021 + 311914-312399,314218-314310,314391-314672,314754-31... 29 2.7
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 28 3.6
03_05_0713 - 27070063-27070126,27070202-27070290,27070369-270704... 28 3.6
11_06_0296 + 22046649-22048202,22048524-22048703,22048811-220488... 28 4.8
07_02_0012 - 11770058-11770770,11770919-11771000,11771064-117710... 28 4.8
01_04_0126 + 16397069-16397842 28 4.8
01_01_0489 + 3608720-3608811,3609326-3609431,3609518-3609581,360... 28 4.8
04_03_0897 - 20646750-20646918,20647927-20648038,20649650-206501... 27 6.3
02_05_0483 - 29391929-29392256,29393048-29393148,29393640-293938... 27 6.3
01_01_0020 + 147147-147313,148450-148548,148634-148742,148856-14... 27 6.3
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 27 8.4
08_02_0111 - 12678660-12678905,12680144-12680204,12680282-126803... 27 8.4
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 27 8.4
07_03_0153 - 14481421-14481506,14481933-14482111,14483046-144831... 27 8.4
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 27 8.4
>11_01_0442 -
3369827-3370168,3370608-3372616,3372953-3373277,
3373386-3373415
Length = 901
Score = 34.3 bits (75), Expect = 0.055
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +1
Query: 91 ADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEHQ 270
A T++N+ +DQ N LD +KE + + + EE +++ DS EL+ H
Sbjct: 136 ASTQKNASLDDQVNHLDDALKECVRQLRQAREEQEEKIRDAVAKKTQELDSHKSELQNH- 194
Query: 271 AFKMMNQVQWMKI 309
+++ Q++ K+
Sbjct: 195 IYELKQQLEAAKL 207
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Frame = +1
Query: 16 DIDETASGAM-----NEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEG 180
D+ ++ GAM E GD L + E N + + + +D ++ E E+ E
Sbjct: 16 DLTQSQRGAMFRYITKESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVEN 75
Query: 181 LGDAEESPDQSI 216
GD + D S+
Sbjct: 76 HGDGDNVDDSSV 87
>01_01_0850 - 6641980-6642163,6642791-6644091
Length = 494
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 88 PADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKE 264
P D EE++ +D+D+ LD I +S+ +E ++ E P++S +SA P++ EL+E
Sbjct: 304 PKDCEESASDSDEDDDLDDFIIN-DSDCSENSANSAE-PEESDASA--PSEGSSSELEE 358
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 AEDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQ-DNQLDSMIKEPESEEAE 177
A+ ++E A ++EE A D D+EE ++ DN + + ++E
Sbjct: 164 ADSEESMEEEAGSEVSEEEAAADDMKEIADKDSEEAQDEDKHGDNHKGEVADQLSNDEDV 223
Query: 178 GLGDAEESPDQSISSAILPTDS 243
G + +ESP+ + +++L DS
Sbjct: 224 GGRENDESPNDELDTSLLVLDS 245
Score = 31.5 bits (68), Expect = 0.39
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYI---GDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEA 174
E +++ TA + EE + G+ + D E + ++D + + + E E EE
Sbjct: 104 EPALEVAITAHEPVEEEPKDVMETGEEAIEPEEDEEPEEAEVEEDEEPEEL--EMEEEEP 161
Query: 175 EGLGDAEESPDQSISSAILPTDSGVGELKE 264
E D+EES ++ S + ++ ++KE
Sbjct: 162 ED-ADSEESMEEEAGSEVSEEEAAADDMKE 190
>05_04_0125 - 18241542-18242129
Length = 195
Score = 32.3 bits (70), Expect = 0.22
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +1
Query: 121 DQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEHQAFKMMNQVQW 300
D D Q+ S + E + +GD E P + + P GVG + KM+ + ++
Sbjct: 17 DGDPQVPSRLIGLHGEVEDVVGDRAEEPAAEAAIGLFPGSVGVG---GRSSVKMIEETKF 73
Query: 301 MKI*LKEGLPAVMMSTT 351
+EGLP V++ T
Sbjct: 74 PTHRAEEGLPLVVVGVT 90
>01_06_1742 - 39585879-39585994,39586089-39586238,39586288-39586375,
39586479-39586640,39586753-39586877,39586992-39587030,
39587290-39587476,39587643-39587713,39589371-39589564,
39589656-39589767,39589899-39590082,39590177-39590503,
39590780-39591061,39591148-39591621,39591730-39591813,
39591850-39591939,39592024-39592247,39592503-39592600,
39592679-39593169,39593249-39593520,39594266-39594522,
39594672-39594890,39595007-39595167,39595249-39595441,
39595528-39595633,39595947-39596121,39596404-39596556,
39596663-39596794,39597120-39597184,39597754-39597819,
39598433-39598511,39598587-39598767,39598864-39598976
Length = 1889
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPAD---TEENSPQNDQDNQLDSMIKEPESEEA 174
+D +D ++S ++ES D PA+ +EE + QD SM+ E +E+
Sbjct: 1704 DDDDSLDSSSSDDDDDESGDEDDGSDELPAEMESSEEEDGSDGQDESSSSMVSTDEEDES 1763
Query: 175 EGLGDAEESPDQS 213
+ + E P+ S
Sbjct: 1764 DEEDEIPEKPESS 1776
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 31.9 bits (69), Expect = 0.29
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 88 PADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEE 198
P+D E S D+D+ +S+++ E +E + D+EE
Sbjct: 940 PSDAEPESESEDEDSDSESLVESDEDDEDDSEEDSEE 976
>02_05_0309 +
27762613-27763070,27763940-27764060,27764168-27764287,
27764633-27764863,27764964-27765503
Length = 489
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVG 252
D++E ++D+D +++ +E E EE EG + E S +LP G G
Sbjct: 18 DSDEEEEEDDEDEEVEEEEEEEEEEEYEGEEEEMEGEVPVSSPLMLPAARGGG 70
>09_04_0507 + 18194320-18195081
Length = 253
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ 210
A+ A EE D ++PA S + + + + + + E+EEA S +
Sbjct: 106 AAAAPAEEGDEEEDASTASPASAPGASEEAEGEEEAPAGAPDAEAEEAASGPSEASSEEP 165
Query: 211 SISSAILPTDSGVGELKE 264
S ++A P +SG GE E
Sbjct: 166 SAAAAAAPEESGGGEEAE 183
>09_03_0211 + 13511893-13512259,13512563-13513038
Length = 280
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES 201
D+ + +E+ GD+ +D +E S +D+D ++ + S++ + D EES
Sbjct: 29 DQYVEESDDEDGEVSGDD--EEVSDEDEFSATSDEDESIEETDDDGISDDDDSNDDEEES 86
Query: 202 PD-------QSISSAILPTDSGVGELKE 264
+ SISS L +SG+ +LK+
Sbjct: 87 NEVNDTLLLYSISSQQLLANSGLDDLKD 114
>07_03_1591 +
27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 258 EGAPSVQDDESSTMDEDIAEGGVAXSDDVNDISSAAQEILSTGXSSSXAE 407
E +PS+ D +T+++++ EGG DI+ AA + S S+ E
Sbjct: 238 EMSPSLSDGLKTTVEKEVGEGGAVVLLAPEDIARAAVYLASDEASNGVTE 287
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 91 ADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESP 204
A EE +D DN DS + + EE E D EE P
Sbjct: 504 AGEEEEKEDHDADNDEDSNDDDDDEEEEEEDDDDEEEP 541
>06_03_0924 -
25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 28.7 bits (61), Expect = 2.7
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQ--DNQLDSMIKEP-ESEEA 174
E+ D DE + S I NC S A+ + +P ND ++ S + EP ES E+
Sbjct: 148 EENYDEDEEPPNDNDLPSDNIVQNCTSASAEQLDMAPSNDNLAVEKMSSSLSEPEESFES 207
Query: 175 EGLGD---AEESPDQSISSA--ILPTDSGVGELKEHQAFKMMNQVQWMKI 309
E AEE + +++ +L + G LK + F V+ K+
Sbjct: 208 EAFQKEMVAEEQLESKTATSLPVLCIEDGSVILKFSEIFGAQEPVRKAKM 257
>04_01_0021 +
311914-312399,314218-314310,314391-314672,314754-314826,
315273-315405,315476-315629,315763-315843,316174-316296,
316629-316787,316862-316996,317159-317254,317416-317910,
318651-318722,319496-319537
Length = 807
Score = 28.7 bits (61), Expect = 2.7
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 AEDXMDIDETASGAMNEESAYIGDNCLSTPADTEE--NSPQNDQDNQLDSMIKEPESEEA 174
AED M T ++ + + +S EE +S +N +N LDS +++ ++ E+
Sbjct: 606 AEDVMGSLLTEYLGSPQQDIPVSEGAVSGTVKDEEVIDSSKNSGEN-LDSSMQKNDNGES 664
Query: 175 EGLGDAEESPDQSISSAI 228
+ LGDA P S SSAI
Sbjct: 665 QQLGDA---PADSSSSAI 679
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/78 (21%), Positives = 36/78 (46%)
Frame = +1
Query: 13 MDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDA 192
+D DE M EE GD + D +++ ND + D + + + +E + ++
Sbjct: 525 LDTDE----GMKEEDQLSGDEDDTEELDEDQDISDNDSEENDDELELDSDMDEENDVSES 580
Query: 193 EESPDQSISSAILPTDSG 246
++ D+ +S + +D G
Sbjct: 581 DD--DEELSEKLDDSDEG 596
>03_05_0713 -
27070063-27070126,27070202-27070290,27070369-27070428,
27071110-27071215,27071309-27071428,27072340-27072476,
27072561-27072647,27073660-27073956
Length = 319
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 88 PADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDS 243
PAD ND D+ D +E E E+ + GD EE P +A P +
Sbjct: 22 PADAAAGGGDNDDDDG-DDGTEEDEEEDDDEEGDEEELPPAEDPAAPEPVSA 72
>11_06_0296 +
22046649-22048202,22048524-22048703,22048811-22048860,
22049443-22049564,22051007-22051119,22051227-22051436,
22052152-22052265,22052529-22052658,22053010-22053143,
22053997-22054077,22054181-22054267
Length = 924
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 279 DDESSTMDEDIAEGGVAXSDDVNDISSAAQEILSTGXSSSXAEPGSDISSS 431
DD S +++ G + D N + +A+Q+ L T S+ + G D S
Sbjct: 545 DDAPSARCRNVSVGHDSNPSDANKMGTASQQNLKTSFSNETLKSGKDHQES 595
>07_02_0012 -
11770058-11770770,11770919-11771000,11771064-11771072,
11771630-11771877,11772006-11772183,11772270-11772278
Length = 412
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 82 STPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ 210
ST EE + Q + D ++ E EEA+ + D +E P++
Sbjct: 245 STEPAEEEETKQGGDPSPSDDAQEKKEGEEADQMKDQKEEPEE 287
>01_04_0126 + 16397069-16397842
Length = 257
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 145 MIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELK 261
+I P+ +E G D E +P+ IS A +GVGE K
Sbjct: 9 LIDMPQPQETNG--DGEAAPEADISMATTLMPNGVGERK 45
>01_01_0489 +
3608720-3608811,3609326-3609431,3609518-3609581,
3609905-3609965,3610017-3610144,3610236-3610385,
3610537-3610791,3611060-3611265,3611469-3611696,
3612161-3612259
Length = 462
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 25 ETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAE 177
+++ A N+ + +N S+P D + +++ N+ + + E SEE E
Sbjct: 153 DSSETAENKPGNFASENAPSSPCDASLHQTEDELQNENSTAVHESLSEEEE 203
>04_03_0897 -
20646750-20646918,20647927-20648038,20649650-20650108,
20650237-20650330,20650449-20650525,20650637-20650688,
20650770-20650927,20651191-20651281,20651465-20652529
Length = 758
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +1
Query: 16 DIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAE 195
DI S ES C+ E + QND +L SM+K+ S + L + +
Sbjct: 103 DISSVNSSVPENESVSDASCCIGDIDSGERYTVQNDGYGELTSMLKDVASHKVVSLLEFD 162
Query: 196 ESPDQSIS 219
P S S
Sbjct: 163 GVPGLSQS 170
>02_05_0483 -
29391929-29392256,29393048-29393148,29393640-29393834,
29394124-29394240,29394376-29394447,29394840-29394950,
29395029-29395127,29395991-29396047,29396607-29397008,
29397249-29397303,29397725-29397809,29398023-29398130,
29398229-29398295,29398717-29398875,29399277-29399405
Length = 694
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 312 AEGGVAXSDDVNDISSAAQEILSTGXSSSXAEPGSDISSSGQXE 443
AE G S D++D+S + + SSS + SD+ G E
Sbjct: 13 AEAGTPRSPDLHDLSDDSDYAAAAAASSSHSAMRSDLVDQGSGE 56
>01_01_0020 +
147147-147313,148450-148548,148634-148742,148856-148927,
149056-149061,150811-150915,151048-151539,151629-152025,
152178-153646,154010-154450,154543-155214
Length = 1342
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 285 ESSTMDEDIAEGGVAXSDDVND-ISSAAQEILSTGXSSSXAEPGS 416
ESS D D+ E V+ SDD D ++ + E+ PG+
Sbjct: 478 ESSLDDNDVGEAAVSVSDDDEDQVTEGSDELTDVTLEGGLRIPGT 522
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEG-LGDA------EESPDQSI 216
+ E+N + D D LD + E EE EG +GD EE+ DQ +
Sbjct: 222 EDEDNEDEEDDDEHLDLEDFDDEEEEEEGAVGDIMYKDFFEEADDQKV 269
>08_02_0111 -
12678660-12678905,12680144-12680204,12680282-12680326,
12680721-12680866
Length = 165
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 19 IDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQL 138
+DE + MN+ G + D EE S +N++D+ L
Sbjct: 100 LDEVKTSRMNDTMTVCGHQATTLRRDEEEASERNNEDSGL 139
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 27.1 bits (57), Expect = 8.4
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 7 DXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLG 186
D + D+T++ EES+ G+ C+S + E Q + + LD ++ A+ +
Sbjct: 295 DDISSDDTSTNTKLEESSAKGEPCVSIGCEILE---QETKSSHLDVIL-----SHADAVA 346
Query: 187 DAEESPDQSISSAILPTDSGVGEL 258
AEE +S+ IL DS +L
Sbjct: 347 SAEEMITESL---ILKKDSNENDL 367
>07_03_0153 -
14481421-14481506,14481933-14482111,14483046-14483130,
14483301-14483499,14484222-14484292,14484380-14484486,
14484571-14484703,14484870-14485020,14485147-14485249,
14485330-14485438,14485587-14485746,14486293-14486394,
14486892-14487009,14487596-14487750,14487850-14487948,
14488078-14488167
Length = 648
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 258 EGAPSVQDDESSTMDEDIAEGGVAXSDD 341
EG+ S DDE S ED EG A SD+
Sbjct: 21 EGSWSDDDDEGSLSFEDSGEGSDAESDE 48
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 82 STPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGE 255
S PA T + +ND NQ D S E + D E P + + AI+P VG+
Sbjct: 210 SAPAITAQ---RNDDVNQEDDNQSSKNSAEEAVVVDGGEPPAATSALAIVPRHGDVGD 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,913,435
Number of Sequences: 37544
Number of extensions: 158402
Number of successful extensions: 735
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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