Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0253.Seq
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4) 31 0.70
SB_36033| Best HMM Match : ATP-synt_B (HMM E-Value=1) 30 1.2
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_44310| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021) 29 1.6
SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0) 29 1.6
SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33) 29 1.6
SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1) 29 2.1
SB_42975| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085) 29 2.1
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 29 2.8
SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0) 29 2.8
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_13876| Best HMM Match : PEARLI-4 (HMM E-Value=4.5) 29 2.8
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 28 3.7
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 3.7
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 3.7
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29) 28 3.7
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026) 28 4.9
SB_51289| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_2502| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20) 27 6.5
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33) 27 6.5
SB_50178| Best HMM Match : F5_F8_type_C (HMM E-Value=0.6) 27 6.5
SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_47531| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 27 6.5
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94) 27 8.6
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95) 27 8.6
>SB_23985| Best HMM Match : CRAM_rpt (HMM E-Value=3.4)
Length = 323
Score = 30.7 bits (66), Expect = 0.70
Identities = 17/74 (22%), Positives = 36/74 (48%)
Frame = +1
Query: 1 AEDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEG 180
+++ + DE+ + ES ++ S +D S ++D+D++ + + ES+E+ G
Sbjct: 113 SDESNESDESNESDKSNESDKSNESDKSNESDKRNESDESDEDDESNGSDESNESDESNG 172
Query: 181 LGDAEESPDQSISS 222
D D+S S
Sbjct: 173 -SDESNGSDESNES 185
>SB_36033| Best HMM Match : ATP-synt_B (HMM E-Value=1)
Length = 550
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = +1
Query: 79 LSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVG 252
L+ +D + + + + + +S++ PE +++G GD E+ + +ISS ++ + G
Sbjct: 480 LALNSDIDSDGEPVEWEIEEESVLTSPECSDSDGSGDDEQPQEPAISSPLVAAVAEAG 537
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIK--EPESEEAEGLGDAEESP 204
+S A+++E G N L +PQND D DS+ + PES A L SP
Sbjct: 3049 SSSALSDE----GFNALIKSVRRRSLTPQNDSDRSTDSLERSMSPESRIANALAKRPPSP 3104
Query: 205 DQSISSAIL 231
+ S +L
Sbjct: 3105 GRVDSKDLL 3113
>SB_6010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 279 DDESSTMDEDIAEGGVAXSDDVNDISSAAQEILSTGXSSSXAEPGSDISS 428
DD+ D+D V+ DD + + ++Q ++S+ SS + S SS
Sbjct: 2120 DDDDDDDDDDDGSHDVSCKDDTIETTRSSQSLISSSCRSSRCQRSSSTSS 2169
>SB_44310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD 207
+ ++N ND DN D K+ + + +G GD + D
Sbjct: 14 EDDDNDEDNDIDNGYDDDDKDDDDNDGDGYGDGDRDGD 51
>SB_44152| Best HMM Match : CRAM_rpt (HMM E-Value=0.021)
Length = 697
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 16 DIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDN 132
DID +A G +N A I L AD EE+S +D D+
Sbjct: 381 DIDGSAGGRINLPDANIKGPGLKIKADHEESSSDSDDDH 419
>SB_35523| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1410
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 88 PADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES-PDQS-ISSAILPTDSGVGELK 261
P+ ++ + D+D ++ E S+ E LG EES D S + + D GE +
Sbjct: 1324 PSGSDAAESEEDEDFSSETETSEEGSDFEEDLGSEEESGKDWSELEEEAIQADRDKGEYR 1383
Query: 262 EHQ 270
EH+
Sbjct: 1384 EHE 1386
>SB_12096| Best HMM Match : ig (HMM E-Value=9.4e-33)
Length = 942
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +1
Query: 100 EENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEHQAFK 279
EE +ND D + E + E GD++ S + S S I+ G L K
Sbjct: 286 EETDDENDDDEESTDDSDESSDDSGESTGDSDTSGEISASPPIIEALLPEGNLDAPSQVK 345
Query: 280 MMNQ 291
M++
Sbjct: 346 AMDE 349
>SB_646| Best HMM Match : MGAT2 (HMM E-Value=2.1)
Length = 298
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +1
Query: 103 ENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEHQA 273
EN ND DN D+ + + D + D +ISS+ G+ L+ QA
Sbjct: 236 ENDSDNDNDNDNDNDNDNDNDNDNDNDNDNDNDNDNTISSSSSGGGGGISSLEVGQA 292
>SB_42975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 100 EENSPQ---NDQDNQLDSMIKEPESEEAEGLGDAEESPD--QSISSAILPTDSGVGELKE 264
++NS Q N + D + E E +++ GD +E + + SS P+DSGV E+
Sbjct: 269 QQNSAQTSTNKSSSNKDGLCLESEPKDSSSEGDEDEFFEAVEDFSSFPEPSDSGVNEITR 328
Query: 265 HQAFKMMNQ 291
+ +Q
Sbjct: 329 EGVLRRCSQ 337
>SB_29898| Best HMM Match : Chromadorea_ALT (HMM E-Value=0.0085)
Length = 350
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISS-AILPTDSGVGELKEHQ 270
D ++ P + D + D +E +++EG + +E+P ++ + A + D V E K H
Sbjct: 34 DETKDEPLQEDDGEEDEETQEEPEDDSEGGTENDENPGEAENEVAEVEKDENVPE-KRHH 92
Query: 271 AFKMMNQV 294
++ ++V
Sbjct: 93 LYRRCHRV 100
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEG--LGDAEESPDQ 210
+ EE P +DQ ++ IKE EEAE + EE P Q
Sbjct: 1050 EREEELPMDDQSTVIEETIKELPLEEAETVVIKSVEELPQQ 1090
>SB_46550| Best HMM Match : Asn_synthase (HMM E-Value=0)
Length = 1663
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +1
Query: 37 GAMNEESAYIGDNCLSTPADTEENSPQNDQDNQ--LDSMIKEPESEEAEGLGDAEESPDQ 210
G++ EE ++ S P D + P +D +++ LD M E EAEG + +
Sbjct: 212 GSIPEEDVVETESSDSKPHDAIKIFPVSDDEDEEDLDEMSVEGVRGEAEGEEQPVDDEED 271
Query: 211 SISSAILPTDSGVGELKEHQAFKMMNQVQ 297
+ ++P D LK+ + F + +Q
Sbjct: 272 ATGPGLVPEDPEAVALKK-RTFVLRELIQ 299
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = +1
Query: 16 DIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAE 195
DI+E+ A N+ES GD T + N Q D +K SE +G +
Sbjct: 503 DIEESKRAAQNQESNNDGDGLKETNPSVDLNKDSGCPLKQ-DENVKLSGSEAHQGKKECA 561
Query: 196 ESPDQSISSAI 228
SP S +
Sbjct: 562 SSPTMKPSQQV 572
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/38 (23%), Positives = 24/38 (63%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD 207
D ++++ ND D+ + + K+ +++ +G+GD ++ D
Sbjct: 1029 DIDDDNNDNDDDDYVVNYCKDDNADDYDGVGDDDDDDD 1066
>SB_21591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES 201
D+ A A + E + GD+ +D +++ +D D+ D +E E EE D ++
Sbjct: 22 DDVADDASDGEDSSEGDDDDEPESDDDDDDDDDDDDDDDDDDEEEEEEEEEN--DDDDDD 79
Query: 202 PDQSISSAILPTDS 243
D + + A D+
Sbjct: 80 DDDADADADADADA 93
>SB_13876| Best HMM Match : PEARLI-4 (HMM E-Value=4.5)
Length = 311
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSG 246
TP + S +D D +D + E SEE E + A ES + I +A + + G
Sbjct: 164 TPTSSSHKS-SDDNDGDMDDIRGELFSEEREDINAASESVSEIIVTATVSSSVG 216
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.3 bits (60), Expect = 3.7
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 19 IDETASGAMNEESAYIG-DNCLSTPADTEENSPQNDQDNQLDSMI-KEPESEEAEGLGDA 192
I ++S + N S G D+ P + S + DQD++LD++ K+ + E+ + ++
Sbjct: 1678 ISGSSSSSSNSLSGSDGEDSADENPPKKKRRSAEKDQDSELDNIFTKKRKKEDKDSEDES 1737
Query: 193 EESPDQSISS 222
++ QS S
Sbjct: 1738 DDYTRQSSPS 1747
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEE 198
D+T E+ IGD E+N + D D+ + + + E+ G DA+E
Sbjct: 558 DKTEESKDGEKKEEIGDKKSDKEESAEKNESEKDDDDGKEDDKGDKDDEDGGGEKDADE 616
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 16 DIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEP-ESEEAEGLGDA 192
D+D + + ++E Y D+ + D+E + +ND D+ D + +E E +E++G D
Sbjct: 333 DMDSDHNNSCDDED-YDDDDVHND--DSENDDDENDDDDDDDDISREDNEEKESDGDDDG 389
Query: 193 EESPD 207
++ D
Sbjct: 390 DDDDD 394
>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
Length = 1544
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 294 TMDEDIAEGGVAXSDDVNDISSAAQEILSTGXSSSXAEPGSDIS 425
T+D D G + DDV+D SS ++ G D+S
Sbjct: 1343 TIDGDDVSDGSSDGDDVSDSSSDGDDVSDGASDGDDVSDGDDVS 1386
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +3
Query: 255 VEGAPSVQDDESSTMDEDIAEGGVAXSDDV----NDISSAAQEILSTGXSSSXAEPGSDI 422
V+GA + D + D D G + DDV ND+S+ A + S+ A G D+
Sbjct: 178 VDGANNCDDVSNGASDGDDVSNGSSDGDDVSNGANDVSNGAND---GDDVSNVANDGDDV 234
Query: 423 SS 428
S+
Sbjct: 235 SN 236
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSG 246
TP + S +D D +D + E SEE E + A ES + I +A + + G
Sbjct: 498 TPTSSSHKS-SDDNDGDMDDIRGELFSEEKEDVNAASESVSEIIVTATVSSSVG 550
>SB_55826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 46 NEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSA 225
+++ A NC ++ E N++ +E +S EG+ DAEE D ++S+
Sbjct: 506 SDDHACAESNCKDDHSEKEAEDMDNNEGKSSTLYGQESDSNN-EGMSDAEELSDSELASS 564
>SB_27474| Best HMM Match : MANEC (HMM E-Value=0.0026)
Length = 3342
Score = 27.9 bits (59), Expect = 4.9
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +1
Query: 58 AYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPT 237
AY D+ + +E S +N + LD S E +G+G A+ SP++ + + P+
Sbjct: 1583 AYSIDDGKKDASSVKEPSHKNKEKAALDEKESIHGSVEKDGVGKADSSPNK--TEIVGPS 1640
Query: 238 DSGVGELKEHQ 270
G H+
Sbjct: 1641 TKGSSRFHSHK 1651
>SB_51289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +1
Query: 19 IDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEE 198
I+E+ G + + N S +TE N Q D D + S E S ++E + +
Sbjct: 135 IEESGEGKVESNNEENRKNPESEICETEPNDKQQDNDTK-GSSSPENSSVDSE-IKQETK 192
Query: 199 SPDQSISSAILPTDSGVGELKEHQ 270
SP SS G + +EHQ
Sbjct: 193 SPTTEASSEGATKKEGSPQDQEHQ 216
>SB_2502| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD 207
+ E+N ND DN D K+ + + +G GD + D
Sbjct: 14 EDEDNDEDNDIDNGYDDDDKDDDDNDDDGDGDGDGDGD 51
>SB_57119| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=1.4e-20)
Length = 1423
Score = 27.5 bits (58), Expect = 6.5
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 94 DTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEHQA 273
+TE+ PQ QD++ + E +G EES + + D+ G +E QA
Sbjct: 1177 NTEQGGPQEAQDSRACDGEHSDDGEADDGSESGEESEGVTSEHPMTSCDTDKGGTQEDQA 1236
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/85 (17%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQS 213
+ A N+ + ++ P DTEEN +N ++N + P++++ + + + P ++
Sbjct: 460 ANATNDATTNNTEDQQQQPMDTEENKAENKEEN--EKKADAPKNKKKKQVVKNIDLPIEA 517
Query: 214 ISSAILPTDSGVG-ELKEHQAFKMM 285
+ ++ T+ + E+++ F ++
Sbjct: 518 VVPSLTKTEMNLAVEMEDRDKFVLL 542
>SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33)
Length = 2822
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESP 204
TPA E+ +Q + +EP+ EE E +GD E +P
Sbjct: 502 TPAQPSESQETEEQQECKEEPTEEPQKEE-EIVGDPEMAP 540
>SB_50178| Best HMM Match : F5_F8_type_C (HMM E-Value=0.6)
Length = 497
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESA-YIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEA-- 174
E+ D D T +E+S D+ STP D ++ ++ + DS +EP+ E++
Sbjct: 354 EEPDDEDSTPEEPDDEDSTPEEPDDEDSTPEDPDDEDSTPEEPDDEDSTPEEPDDEDSTP 413
Query: 175 EGLGDAEESPDQ 210
E D + +P++
Sbjct: 414 EEPDDEDSTPEE 425
>SB_48594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 NEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKE--PESEEAEGLGDAEESPDQSIS 219
+++ A +GD + P DTE+ +P D D+ I E P + GD E++ +
Sbjct: 326 DKDDAALGDTEDAAPGDTEDAAP-GDTDDAAPGGIDEDAPGVVDDAASGDTEDAAPGDMD 384
Query: 220 SAILPTDSGVGE 255
A L G+G+
Sbjct: 385 DAAL---GGIGD 393
>SB_47531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +1
Query: 91 ADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSG 246
AD +++ +Q S I P++++++ DQS +++I+P DSG
Sbjct: 162 ADQSKSTIIPPDADQSKSTIIPPDADQSKSTSIIPPDADQSKNTSIIPPDSG 213
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +1
Query: 4 EDXMDIDETASGAM--NEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAE 177
+ D DE++ + +E S+ D+ STP EEN D ++ E +E
Sbjct: 714 QQRQDSDESSGEDLEDDESSSSDEDDDKSTPELAEENEQSTRSIPCKDKLV---EGQEQT 770
Query: 178 GLGDAEESPDQSISSAILPTDSGVGELKEHQAFKMMNQVQ 297
+ + +E D++ P +G + K Q + + VQ
Sbjct: 771 NVDNLDEKKDKTDQEQYKPEKTGQEQEKTDQELEKPDMVQ 810
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 52 ESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPES 165
E+ +GD ++ A+ EE +D D Q + PES
Sbjct: 595 ENLLLGDEIVNDDAEEEEEDEDDDDDEQESTTEANPES 632
>SB_47057| Best HMM Match : Merozoite_SPAM (HMM E-Value=0.94)
Length = 969
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +1
Query: 79 LSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGEL 258
L+ P D + D D + + I + E + EE +Q+++SAI S E+
Sbjct: 644 LAVPLDYSDIEQDVDYDEEHEKAISDAIQAEETLSREMEEWHEQALASAIAHEKSLNQEI 703
Query: 259 KEHQAF 276
++ +AF
Sbjct: 704 EKEEAF 709
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 79 LSTPADTEENSPQNDQDNQLDSMIKEPESEEAE 177
++ ++TE P+ D+D++ D +E ESEE E
Sbjct: 715 IAKTSETENKVPKVDKDDEEDDDDEEEESEEDE 747
>SB_16516| Best HMM Match : SDA1 (HMM E-Value=0.95)
Length = 1656
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 183
+D D D+T + ++E ++ AD E+ DQDN D + + ++ +
Sbjct: 1177 DDDNDDDDTKNSDDDKEGESDENDKKQGDADHEDKEDSGDQDNNCDDTENQDKDDDDDSK 1236
Query: 184 GDAEE 198
D ++
Sbjct: 1237 DDDKD 1241
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,308,371
Number of Sequences: 59808
Number of extensions: 186602
Number of successful extensions: 1148
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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