Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0253.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   0.62 
EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.          23   4.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.6  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +1

Query: 13  MDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDA 192
           MD   ++SG +N      G +   +   + + SPQ+D+  +LD ++ +      +G+ D 
Sbjct: 576 MDSGISSSGPVNRRVQ--GSSVSPSSFPSPQASPQDDRHRELDDLLSD-MMLTVQGIPDV 632

Query: 193 EESPDQS 213
            +  DQ+
Sbjct: 633 GQKADQT 639


>EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 219 FCHSTNR*WCR*VEGAPSVQDDESSTMDEDIAEGGVAXSDD 341
           +CHS        +E A  + +DE+  M E IAE G + SDD
Sbjct: 53  YCHSVG------MELAEVLNEDEARAMGEVIAE-GESDSDD 86


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/50 (18%), Positives = 24/50 (48%)
 Frame = +1

Query: 76  CLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSA 225
           C+ TP ++++  P         +  ++ +S +  G+G  +  P  + S++
Sbjct: 802 CIITPTNSDDEQPPAGSATAKAATQRDNKSTDKAGIGAGKRRPTLTESTS 851


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,345
Number of Sequences: 2352
Number of extensions: 5742
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)