Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0253.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain cont... 36 0.059
AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein pr... 36 0.059
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein. 36 0.059
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 31 2.2
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 31 2.2
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 31 2.2
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 31 2.2
BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein. 31 2.9
AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B... 31 2.9
AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A... 31 2.9
Z19585-1|CAA79635.1| 961|Homo sapiens thrombospondin-4 protein. 30 3.9
BC050456-1|AAH50456.1| 961|Homo sapiens thrombospondin 4 protein. 30 3.9
AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein. 30 3.9
AY566253-1|AAS66982.1| 961|Homo sapiens thrombospondin 4 protein. 30 3.9
AK027230-1|BAB15700.1| 668|Homo sapiens protein ( Homo sapiens ... 30 3.9
AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein. 30 3.9
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 30 5.1
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 30 5.1
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 30 5.1
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 30 5.1
BC113747-1|AAI13748.1| 736|Homo sapiens poly(A) polymerase gamm... 30 5.1
BC111701-1|AAI11702.1| 736|Homo sapiens poly(A) polymerase gamm... 30 5.1
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 30 5.1
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 30 5.1
BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5 p... 30 5.1
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 30 5.1
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 30 5.1
AY029162-1|AAK31791.1| 736|Homo sapiens SRP RNA 3' adenylating ... 30 5.1
AK024249-1|BAB14858.1| 302|Homo sapiens protein ( Homo sapiens ... 30 5.1
AK023544-1|BAB14604.1| 675|Homo sapiens protein ( Homo sapiens ... 30 5.1
AK023034-1|BAB14368.1| 302|Homo sapiens protein ( Homo sapiens ... 30 5.1
AJ308101-1|CAC59751.1| 736|Homo sapiens poly(A) polymerase gamm... 30 5.1
AF312211-1|AAK83701.1| 736|Homo sapiens neo-poly(A) polymerase ... 30 5.1
AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5 p... 30 5.1
AF039691-1|AAC18040.1| 897|Homo sapiens antigen NY-CO-9 protein. 30 5.1
AC011245-1|AAY14677.1| 270|Homo sapiens unknown protein. 30 5.1
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 30 5.1
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 30 5.1
AB209304-1|BAD92541.1| 382|Homo sapiens poly(A) polymerase gamm... 30 5.1
AB177853-1|BAD66831.1| 716|Homo sapiens KIAA0600 splice variant... 30 5.1
X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein. 29 6.8
DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant pro... 29 6.8
BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open readi... 29 6.8
BC066644-1|AAH66644.1| 613|Homo sapiens KIAA1949 protein. 29 6.8
AY894565-1|AAX85104.1| 867|Homo sapiens NBPF9 isoform 1 protein. 29 6.8
AL834414-1|CAD39076.1| 625|Homo sapiens hypothetical protein pr... 29 6.8
AL832318-1|CAD38613.1| 332|Homo sapiens hypothetical protein pr... 29 6.8
AL732442-14|CAM25008.1| 613|Homo sapiens KIAA1949 protein. 29 6.8
AL662798-1|CAM25551.1| 613|Homo sapiens KIAA1949 protein. 29 6.8
AL662797-1|CAM25509.1| 613|Homo sapiens KIAA1949 protein. 29 6.8
AL139423-2|CAI22570.1| 706|Homo sapiens castor zinc finger 1 pr... 29 6.8
AK127470-1|BAC86994.1| 1184|Homo sapiens ). protein. 29 6.8
AK126182-1|BAC86478.1| 362|Homo sapiens protein ( Homo sapiens ... 29 6.8
AB075829-1|BAB85535.1| 662|Homo sapiens KIAA1949 protein protein. 29 6.8
AB073600-1|BAD38640.1| 613|Homo sapiens putative protein produc... 29 6.8
AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein. 29 6.8
Z68694-1|CAI41976.1| 206|Homo sapiens transcription elongation ... 29 9.0
BC132924-1|AAI32925.1| 206|Homo sapiens transcription elongatio... 29 9.0
BC132922-1|AAI32923.1| 206|Homo sapiens transcription elongatio... 29 9.0
AK127772-1|BAC87125.1| 1314|Homo sapiens protein ( Homo sapiens ... 29 9.0
AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens ... 29 9.0
AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protei... 29 9.0
AF183423-1|AAG09692.1| 328|Homo sapiens reticulocabin precursor... 29 9.0
AF044209-1|AAC33550.1| 2440|Homo sapiens nuclear receptor co-rep... 29 9.0
>BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain
containing 136 protein.
Length = 1154
Score = 36.3 bits (80), Expect = 0.059
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 183
E +++E E GD ++ PAD EE DQ+ E + EE E
Sbjct: 1038 EKKEEMEEEKKEVKEEAKEQCGDELVAEPADPEEAKSTEDQEE------NEEDKEEEEKE 1091
Query: 184 GDAEESPDQSISSAILPTDSGVGELKE 264
D+EE D + SS P ++ L E
Sbjct: 1092 EDSEEEEDDADSSLESPEENNPLRLSE 1118
>AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein
protein.
Length = 1033
Score = 36.3 bits (80), Expect = 0.059
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 183
E +++E E GD ++ PAD EE DQ+ E + EE E
Sbjct: 914 EKKEEMEEEKKEVKEEAKEQCGDELVAEPADPEEAKSTEDQEE------NEEDKEEEEKE 967
Query: 184 GDAEESPDQSISSAILPTDSGVGELKE 264
D+EE D + SS P ++ L E
Sbjct: 968 EDSEEEEDDADSSLESPEENNPLRLSE 994
>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
Length = 1270
Score = 36.3 bits (80), Expect = 0.059
Identities = 25/87 (28%), Positives = 36/87 (41%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGL 183
E +++E E GD ++ PAD EE DQ+ E + EE E
Sbjct: 1154 EKKEEMEEEKKEVKEEAKEQCGDELVAEPADPEEAKSTEDQEE------NEEDKEEEEKE 1207
Query: 184 GDAEESPDQSISSAILPTDSGVGELKE 264
D+EE D + SS P ++ L E
Sbjct: 1208 EDSEEEEDDADSSLESPEENNPLRLSE 1234
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 31.1 bits (67), Expect = 2.2
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIG-DNCLSTPADTEENSPQN---DQDNQLDSMIKEPESEE 171
ED D DE N +S+ G D+ S+ D E+ +N D+D D E E E
Sbjct: 648 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707
Query: 172 AEGLGDAEESPDQSISS 222
+EG + S S S
Sbjct: 708 SEGSSSSSSSSGDSSDS 724
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 31.1 bits (67), Expect = 2.2
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIG-DNCLSTPADTEENSPQN---DQDNQLDSMIKEPESEE 171
ED D DE N +S+ G D+ S+ D E+ +N D+D D E E E
Sbjct: 685 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 744
Query: 172 AEGLGDAEESPDQSISS 222
+EG + S S S
Sbjct: 745 SEGSSSSSSSSGDSSDS 761
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 31.1 bits (67), Expect = 2.2
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIG-DNCLSTPADTEENSPQN---DQDNQLDSMIKEPESEE 171
ED D DE N +S+ G D+ S+ D E+ +N D+D D E E E
Sbjct: 685 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 744
Query: 172 AEGLGDAEESPDQSISS 222
+EG + S S S
Sbjct: 745 SEGSSSSSSSSGDSSDS 761
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 31.1 bits (67), Expect = 2.2
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIG-DNCLSTPADTEENSPQN---DQDNQLDSMIKEPESEE 171
ED D DE N +S+ G D+ S+ D E+ +N D+D D E E E
Sbjct: 648 EDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNE 707
Query: 172 AEGLGDAEESPDQSISS 222
+EG + S S S
Sbjct: 708 SEGSSSSSSSSGDSSDS 724
>BC040196-1|AAH40196.1| 408|Homo sapiens CLIC6 protein protein.
Length = 408
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +1
Query: 37 GAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPES-EEAEGLGDAEESPDQS 213
G E A GD D + PQ + + + PE E E G EESPD S
Sbjct: 60 GVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEERRERSPEGPREEEAAGGEEESPDSS 119
>AF448439-1|AAN76730.1| 704|Homo sapiens chloride channel form B
protein.
Length = 704
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +1
Query: 37 GAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPES-EEAEGLGDAEESPDQS 213
G E A GD D + PQ + + + PE E E G EESPD S
Sbjct: 338 GVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEERRERSPEGPREEEAAGGEEESPDSS 397
>AF448438-1|AAN76729.1| 686|Homo sapiens chloride channel form A
protein.
Length = 686
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +1
Query: 37 GAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPES-EEAEGLGDAEESPDQS 213
G E A GD D + PQ + + + PE E E G EESPD S
Sbjct: 338 GVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEERRERSPEGPREEEAAGGEEESPDSS 397
>Z19585-1|CAA79635.1| 961|Homo sapiens thrombospondin-4 protein.
Length = 961
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 IGDNCLSTPADTEENSPQNDQDNQL--DSMIKEPESEEAEGLGDAEESPDQSISSAILPT 237
+GD C S P + N Q+D DN L DS +S + +G D+ ++ I+SA L T
Sbjct: 598 VGDACDSCPDVSNPN--QSDVDNDLVGDSCDTNQDS-DGDGHQDSTDNCPTVINSAQLDT 654
Query: 238 D-SGVGE 255
D G+G+
Sbjct: 655 DKDGIGD 661
>BC050456-1|AAH50456.1| 961|Homo sapiens thrombospondin 4 protein.
Length = 961
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 IGDNCLSTPADTEENSPQNDQDNQL--DSMIKEPESEEAEGLGDAEESPDQSISSAILPT 237
+GD C S P + N Q+D DN L DS +S + +G D+ ++ I+SA L T
Sbjct: 598 VGDACDSCPDVSNPN--QSDVDNDLVGDSCDTNQDS-DGDGHQDSTDNCPTVINSAQLDT 654
Query: 238 D-SGVGE 255
D G+G+
Sbjct: 655 DKDGIGD 661
>AY894575-1|AAX85114.1| 1214|Homo sapiens NBPF1 protein.
Length = 1214
Score = 30.3 bits (65), Expect = 3.9
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEP----ESEEAEGLGD 189
DE + + + C ++ SP+ND+D D ++E ES +
Sbjct: 134 DEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQK 193
Query: 190 AEES--PDQSISSAILPTDSGVGELKEHQAFKMMN 288
AEES P+ S+ + + G +Q K +N
Sbjct: 194 AEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIN 228
Score = 30.3 bits (65), Expect = 3.9
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 6/95 (6%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEP----ESEEAEGLGD 189
DE + + + C ++ SP+ND+D D ++E ES +
Sbjct: 405 DEPDKSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQK 464
Query: 190 AEES--PDQSISSAILPTDSGVGELKEHQAFKMMN 288
AEES P+ S+ + + G +Q K +N
Sbjct: 465 AEESKVPEDSLEECAITCSNSHGPCDSNQPHKNIN 499
>AY566253-1|AAS66982.1| 961|Homo sapiens thrombospondin 4 protein.
Length = 961
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 64 IGDNCLSTPADTEENSPQNDQDNQL--DSMIKEPESEEAEGLGDAEESPDQSISSAILPT 237
+GD C S P + N Q+D DN L DS +S + +G D+ ++ I+SA L T
Sbjct: 598 VGDACDSCPDVSNPN--QSDVDNDLVGDSCDTNQDS-DGDGHQDSTDNCPTVINSAQLDT 654
Query: 238 D-SGVGE 255
D G+G+
Sbjct: 655 DKDGIGD 661
>AK027230-1|BAB15700.1| 668|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23577 fis, clone LNG12640. ).
Length = 668
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 88 PADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEH 267
PAD +E SPQ + ++ KEP ++ E +SP + ++ ++ T + E+K
Sbjct: 131 PADPKEKSPQMGANKKVK---KEPPKKKQEDKKPKGKSPPMAEATPVIVTTEEIAEIKRK 187
Query: 268 QAFKM 282
++
Sbjct: 188 NELRV 192
>AB051557-1|BAB21861.1| 1307|Homo sapiens KIAA1770 protein protein.
Length = 1307
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = +1
Query: 88 PADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGVGELKEH 267
PAD +E SPQ + ++ KEP ++ E +SP + ++ ++ T + E+K
Sbjct: 769 PADPKEKSPQMGANKKVK---KEPPKKKQEDKKPKGKSPPMAEATPVIVTTEEIAEIKRK 825
Query: 268 QAFKM 282
++
Sbjct: 826 NELRV 830
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 127 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 185
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 186 SAPWNSFLP 194
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>BC113747-1|AAI13748.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 515 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 573
>BC111701-1|AAI11702.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 515 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 573
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5
protein.
Length = 1122
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPAD--TEENSPQND---QDNQLDSMIKEP--ESEEAEG 180
+ET ++ +G+ L+ P + TE S Q D +D + D +E + ++ EG
Sbjct: 550 EETEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEEDGEEEEDCIQVKDEEG 609
Query: 181 LGDAEESPD 207
AEE PD
Sbjct: 610 ESGAEEGPD 618
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>AY029162-1|AAK31791.1| 736|Homo sapiens SRP RNA 3' adenylating
enzyme/pap2 protein.
Length = 736
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 515 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 573
>AK024249-1|BAB14858.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ14187 fis, clone NT2RP2005776, weakly similar to
POLY(A) POLYMERASE TYPE 2 (EC 2.7.7.19). ).
Length = 302
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 81 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 139
>AK023544-1|BAB14604.1| 675|Homo sapiens protein ( Homo sapiens
cDNA FLJ13482 fis, clone PLACE1003885, moderately
similar to POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 675
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 512 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 570
>AK023034-1|BAB14368.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ12972 fis, clone NT2RP2005942, weakly similar to
POLY(A) POLYMERASE (EC 2.7.7.19). ).
Length = 302
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 81 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 139
>AJ308101-1|CAC59751.1| 736|Homo sapiens poly(A) polymerase gamma
protein.
Length = 736
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 515 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 573
>AF312211-1|AAK83701.1| 736|Homo sapiens neo-poly(A) polymerase
protein.
Length = 736
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 515 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 573
>AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5
protein.
Length = 1122
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPAD--TEENSPQND---QDNQLDSMIKEP--ESEEAEG 180
+ET ++ +G+ L+ P + TE S Q D +D + D +E + ++ EG
Sbjct: 550 EETEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEEDGEEEEDCIQVKDEEG 609
Query: 181 LGDAEESPD 207
AEE PD
Sbjct: 610 ESGAEEGPD 618
>AF039691-1|AAC18040.1| 897|Homo sapiens antigen NY-CO-9 protein.
Length = 897
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPAD--TEENSPQND---QDNQLDSMIKEP--ESEEAEG 180
+ET ++ +G+ L+ P + TE S Q D +D + D +E + ++ EG
Sbjct: 362 EETEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEEDGEEEEDCIQVKDEEG 421
Query: 181 LGDAEESPD 207
AEE PD
Sbjct: 422 ESGAEEGPD 430
>AC011245-1|AAY14677.1| 270|Homo sapiens unknown protein.
Length = 270
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 49 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 107
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 34 SGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEES--PD 207
+G N E + D LS + N QN Q+N+ +S + ESE + G+ ++ P
Sbjct: 128 TGYGNREEQNLSD-LLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPK 186
Query: 208 QSISSAILP 234
+ ++ LP
Sbjct: 187 SAPWNSFLP 195
>AB209304-1|BAD92541.1| 382|Homo sapiens poly(A) polymerase gamma
variant protein.
Length = 382
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 31 ASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDS-MIKEPESEEAEGLGDAEESP 204
+SG + + + +CL + DT+ +P N ++ DS + E E AE E P
Sbjct: 183 SSGGLQSKRLSLDSSCLDSSRDTDNGTPFNSPASKSDSPSVGETERNSAEPAAVIVEKP 241
>AB177853-1|BAD66831.1| 716|Homo sapiens KIAA0600 splice variant 1
protein.
Length = 716
Score = 29.9 bits (64), Expect = 5.1
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPAD--TEENSPQND---QDNQLDSMIKEP--ESEEAEG 180
+ET ++ +G+ L+ P + TE S Q D +D + D +E + ++ EG
Sbjct: 144 EETEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEEDGEEEEDCIQVKDEEG 203
Query: 181 LGDAEESPD 207
AEE PD
Sbjct: 204 ESGAEEGPD 212
>X66397-1|CAA47021.1| 2349|Homo sapiens Tpr protein.
Length = 2349
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 67 GDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAE 195
GD+ + +D EE ++D D++ D+ + + + EG G A+
Sbjct: 1940 GDDVIVIDSDDEEEDEEDDDDDEDDTGMGDEGEDSNEGTGSAD 1982
>DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant protein.
Length = 1759
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQN 120
++ MD + GAM+ ES+ + +C STP E + N
Sbjct: 1351 DECMDYTGCSPGAMSSESSTMDRSCSSTPVGNESTAAGN 1389
>BX470253-2|CAI16294.1| 1530|Homo sapiens chromosome 1 open reading
frame 173 protein.
Length = 1530
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 285 ESSTMDEDIAEGGVAXSDDVNDISSAAQEILSTG---XSSSXAEPGSDISSSGQXE 443
E++T +E AEGGVA SD A+ ++ TG ++S E GS+ + G E
Sbjct: 924 EAATSEEGEAEGGVAVSDVGESEEEASIDLEDTGPMEDTASKREDGSEEAILGGEE 979
>BC066644-1|AAH66644.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 345 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 404
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 405 PEDAGTGGLRQQE 417
>AY894565-1|AAX85104.1| 867|Homo sapiens NBPF9 isoform 1 protein.
Length = 867
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = +1
Query: 64 IGDNCLSTPADTEENSPQNDQDNQLDSMIKEP----ESEEAEGLGDAEES--PDQSISSA 225
+ + C ++ SP+ND+D D ++E ES + AEES P+ S+
Sbjct: 148 LAEGCRLAQQLFQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEESKVPEDSLEEC 207
Query: 226 ILPTDSGVGELKEHQAFKMMN 288
+ + G +Q K +N
Sbjct: 208 AITCSNSHGPCDSNQPHKNIN 228
>AL834414-1|CAD39076.1| 625|Homo sapiens hypothetical protein
protein.
Length = 625
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 285 ESSTMDEDIAEGGVAXSDDVNDISSAAQEILSTG---XSSSXAEPGSDISSSGQXE 443
E++T +E AEGGVA SD A+ ++ TG ++S E GS+ + G E
Sbjct: 20 EAATSEEGEAEGGVAVSDVGESEEEASIDLEDTGPMEDTASKREDGSEEAILGGEE 75
>AL832318-1|CAD38613.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 64 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 123
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 124 PEDAGTGGLRQQE 136
>AL732442-14|CAM25008.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 345 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 404
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 405 PEDAGTGGLRQQE 417
>AL662798-1|CAM25551.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 345 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 404
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 405 PEDAGTGGLRQQE 417
>AL662797-1|CAM25509.1| 613|Homo sapiens KIAA1949 protein.
Length = 613
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 345 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 404
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 405 PEDAGTGGLRQQE 417
>AL139423-2|CAI22570.1| 706|Homo sapiens castor zinc finger 1
protein.
Length = 706
Score = 29.5 bits (63), Expect = 6.8
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 4 EDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQN 120
++ MD + GAM+ ES+ + +C STP E + N
Sbjct: 298 DECMDYTGCSPGAMSSESSTMDRSCSSTPVGNESTAAGN 336
>AK127470-1|BAC86994.1| 1184|Homo sapiens ). protein.
Length = 1184
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 285 ESSTMDEDIAEGGVAXSDDVNDISSAAQEILSTG---XSSSXAEPGSDISSSGQXE 443
E++T +E AEGGVA SD A+ ++ TG ++S E GS+ + G E
Sbjct: 924 EAATSEEGEAEGGVAVSDVGESEEEASIDLEDTGPMEDTASKREDGSEEAILGGEE 979
>AK126182-1|BAC86478.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ44194 fis, clone THYMU2040975, weakly similar
to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 362
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 20 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 79
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 80 PEDAGTGGLRQQE 92
>AB075829-1|BAB85535.1| 662|Homo sapiens KIAA1949 protein protein.
Length = 662
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 394 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 453
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 454 PEDAGTGGLRQQE 466
>AB073600-1|BAD38640.1| 613|Homo sapiens putative protein product
of HKMT1098 protein.
Length = 613
Score = 29.5 bits (63), Expect = 6.8
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Frame = +1
Query: 85 TPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQ-----------SISSAIL 231
TP D E + + + + +++ P E EG + EE+ Q S+ S +
Sbjct: 345 TPRDIEAQTQKPEPPESAEKLLESPGVEAGEGEAEKEEAGAQGRPLRALQNCCSVPSPLP 404
Query: 232 PTDSGVGELKEHQ 270
P D+G G L++ +
Sbjct: 405 PEDAGTGGLRQQE 417
>AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein.
Length = 1080
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Frame = +1
Query: 22 DETASGAMNEESAYIGDNCLSTPAD--TEENSPQND---QDNQLDSMIKEP--ESEEAEG 180
+ET ++ +G+ L+ P + TE S Q D +D + D +E + ++ EG
Sbjct: 593 EETEEELTEQQEVLLGEGALTMPREGSTESESTQEDLEEEDEEDDGEEEEDCIQVKDEEG 652
Query: 181 LGDAEESPD 207
AEE PD
Sbjct: 653 ESGAEEGPD 661
>Z68694-1|CAI41976.1| 206|Homo sapiens transcription elongation
factor A (SII)-like 5 protein.
Length = 206
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 103 ENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD 207
E P+N+++ + + ++ S E EG D EE PD
Sbjct: 9 EGKPENERNLESEGKPEDEGSTEDEGKSDEEEKPD 43
>BC132924-1|AAI32925.1| 206|Homo sapiens transcription elongation
factor A (SII)-like 5 protein.
Length = 206
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 103 ENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD 207
E P+N+++ + + ++ S E EG D EE PD
Sbjct: 9 EGKPENERNLESEGKPEDEGSTEDEGKSDEEEKPD 43
>BC132922-1|AAI32923.1| 206|Homo sapiens transcription elongation
factor A (SII)-like 5 protein.
Length = 206
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 103 ENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPD 207
E P+N+++ + + ++ S E EG D EE PD
Sbjct: 9 EGKPENERNLESEGKPEDEGSTEDEGKSDEEEKPD 43
>AK127772-1|BAC87125.1| 1314|Homo sapiens protein ( Homo sapiens
cDNA FLJ45873 fis, clone OCBBF3006986, weakly similar
to CDC4-like protein. ).
Length = 1314
Score = 29.1 bits (62), Expect = 9.0
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +1
Query: 70 DNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSISSAILPTDSGV 249
D +ST DT++NS + + ++ S S + L D S D + + + P DS V
Sbjct: 5 DKNMSTE-DTKKNSDEKTDEEKITSFASANVSSDQWSLED-RHSLDSN--TPLFPEDSSV 60
Query: 250 GELKEHQAFKMMNQVQW 300
GEL +FK NQ ++
Sbjct: 61 GEL----SFKSENQEEF 73
>AK097433-1|BAC05051.1| 691|Homo sapiens protein ( Homo sapiens
cDNA FLJ40114 fis, clone TESTI2008762. ).
Length = 691
Score = 29.1 bits (62), Expect = 9.0
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 AEDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAE- 177
A D D A +++S DN + +++NS + DN DS + + +S++++
Sbjct: 168 APDDNSDDSEAPDDNSDDSDVPDDN---SDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDV 224
Query: 178 --GLGDAEESPDQSISSAILPTDS 243
D + PD S + P DS
Sbjct: 225 PDDSSDDSDVPDDSSDDSEAPDDS 248
>AJ311392-1|CAC60255.1| 691|Homo sapiens putative nuclear protein
protein.
Length = 691
Score = 29.1 bits (62), Expect = 9.0
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 AEDXMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEAE- 177
A D D A +++S DN + +++NS + DN DS + + +S++++
Sbjct: 168 APDDNSDDSEAPDDNSDDSDVPDDN---SDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDV 224
Query: 178 --GLGDAEESPDQSISSAILPTDS 243
D + PD S + P DS
Sbjct: 225 PDDSSDDSDVPDDSSDDSEAPDDS 248
>AF183423-1|AAG09692.1| 328|Homo sapiens reticulocabin precursor
protein.
Length = 328
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 362 RTGDTQHWNXLEXCRTWIRHFKQRPXR 442
R GD+ W L R WI H +QR R
Sbjct: 89 RAGDSDGWVSLAELRAWIAHTQQRHIR 115
>AF044209-1|AAC33550.1| 2440|Homo sapiens nuclear receptor
co-repressor N-CoR protein.
Length = 2440
Score = 29.1 bits (62), Expect = 9.0
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 109 SPQNDQDNQLDSMIKEPESEEAEGLGDAEESPDQSIS 219
S Q D+D + + + PE E E + +E+SP+ + S
Sbjct: 707 SAQEDEDIEASNEEENPEDSEVEAVKPSEDSPENATS 743
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,497,225
Number of Sequences: 237096
Number of extensions: 779913
Number of successful extensions: 3311
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 3072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3278
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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