Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0252.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.1  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 295 HISYNNYKKLYKKEHSNVNRW 233
           +I++ NY + Y+ EH N N +
Sbjct: 371 YINHQNYVQGYQGEHPNYNHY 391


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 295 HISYNNYKKLYKKEHSNVNRW 233
           +I++ NY + Y+ EH N N +
Sbjct: 319 YINHQNYVQGYQGEHPNYNHY 339


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 379 HEKLSWTSFLXF*LEGSXFXTVVGLV 456
           H+KL +++   F + G+   T+VG V
Sbjct: 339 HQKLEFSACGFFLINGTLLHTIVGAV 364


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 379 HEKLSWTSFLXF*LEGSXFXTVVGLV 456
           H+KL +++   F + G+   T+VG V
Sbjct: 164 HQKLEFSACGFFLINGTLLHTIVGAV 189


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 27  MFNYTFDLLR*DIDHGNDTE*MXVXSFFHATPXRF 131
           +F Y F +    + H  DT+ + + SF H  P ++
Sbjct: 122 LFYYAFSVA---LLHRPDTQNLDLPSFIHVFPDKY 153


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 292 ISYNNYKKLYKKEHSNV 242
           I++ NY + Y++ H N+
Sbjct: 98  INHQNYNEPYQRTHENM 114


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 292 ISYNNYKKLYKKEHSNV 242
           I++ NY + Y++ H N+
Sbjct: 98  INHQNYNEPYQRTHENM 114


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 292 ISYNNYKKLYKKEHSNV 242
           I++ NY + Y++ H N+
Sbjct: 98  INHQNYNEPYQRTHENM 114


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 192 FIKTSVINDFQSPCIHKCS 136
           F+KT +++DF++     CS
Sbjct: 37  FVKTYLVSDFENYVTFFCS 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,529
Number of Sequences: 336
Number of extensions: 2064
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)