Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0252.Seq
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11531-1|CAA77630.1| 437|Homo sapiens elongation factor-1-gamma... 38 0.015
X63526-1|CAA45089.1| 437|Homo sapiens homologue to elongation f... 38 0.015
M55409-1|AAC18414.1| 358|Homo sapiens pancreatic tumor-related ... 38 0.015
CR407625-1|CAG28553.1| 437|Homo sapiens EEF1G protein. 38 0.015
BT006677-1|AAP35323.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC067738-1|AAH67738.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC031012-1|AAH31012.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC028179-1|AAH28179.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC021974-1|AAH21974.2| 355|Homo sapiens EEF1G protein protein. 38 0.015
BC015813-1|AAH15813.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC013918-1|AAH13918.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC009865-1|AAH09865.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC007949-1|AAH07949.2| 434|Homo sapiens EEF1G protein protein. 38 0.015
BC006520-1|AAH06520.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC006509-1|AAH06509.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
BC000384-1|AAH00384.1| 437|Homo sapiens eukaryotic translation ... 38 0.015
AY542307-1|AAT08176.1| 437|Homo sapiens GIG35 protein. 38 0.015
>Z11531-1|CAA77630.1| 437|Homo sapiens elongation factor-1-gamma
protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>X63526-1|CAA45089.1| 437|Homo sapiens homologue to elongation
factor 1-gamma from A.salina protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>M55409-1|AAC18414.1| 358|Homo sapiens pancreatic tumor-related
protein protein.
Length = 358
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 324 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 358
>CR407625-1|CAG28553.1| 437|Homo sapiens EEF1G protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BT006677-1|AAP35323.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC067738-1|AAH67738.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC031012-1|AAH31012.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC028179-1|AAH28179.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC021974-1|AAH21974.2| 355|Homo sapiens EEF1G protein protein.
Length = 355
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 321 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 355
>BC015813-1|AAH15813.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC013918-1|AAH13918.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC009865-1|AAH09865.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC007949-1|AAH07949.2| 434|Homo sapiens EEF1G protein protein.
Length = 434
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 400 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 434
>BC006520-1|AAH06520.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC006509-1|AAH06509.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>BC000384-1|AAH00384.1| 437|Homo sapiens eukaryotic translation
elongation factor 1 gamma protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
>AY542307-1|AAT08176.1| 437|Homo sapiens GIG35 protein.
Length = 437
Score = 38.3 bits (85), Expect = 0.015
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -3
Query: 428 DPSS*KXKKLVQDNFSWNGTDKD-GRKFNQGKIFK 327
DP S + + LV++ FSW G + G+ FNQGKIFK
Sbjct: 403 DPGSEETQTLVREYFSWEGAFQHVGKAFNQGKIFK 437
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,871,564
Number of Sequences: 237096
Number of extensions: 1100683
Number of successful extensions: 1828
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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