Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0252.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p pro...    56   3e-08
AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation ...    56   3e-08
AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation ...    56   3e-08
AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-P...    56   3e-08
AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-P...    56   3e-08
AY226541-1|AAO47367.1|  485|Drosophila melanogaster pickpocket 1...    28   6.1  
AE014134-1893|ABC65891.1|  485|Drosophila melanogaster CG34042-P...    28   6.1  
AY075158-1|AAL68028.1|  483|Drosophila melanogaster AT01495p pro...    28   8.1  
AE014298-2181|AAF48480.1|  483|Drosophila melanogaster CG8105-PA...    28   8.1  

>BT001612-1|AAN71367.1|  460|Drosophila melanogaster RE32823p
           protein.
          Length = 460

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = -3

Query: 428 DPSS*KXKKLVQDNFSWNGTDKDGRKFNQGKIFK 327
           D  S + KKLV   FSW+GTDKDGRKFNQGKIFK
Sbjct: 427 DAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 460


>AF148814-1|AAF26671.1|  431|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 431

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = -3

Query: 428 DPSS*KXKKLVQDNFSWNGTDKDGRKFNQGKIFK 327
           D  S + KKLV   FSW+GTDKDGRKFNQGKIFK
Sbjct: 398 DAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431


>AF148813-1|AAF26670.1|  360|Drosophila melanogaster translation
           elongation factor1 gamma protein.
          Length = 360

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = -3

Query: 428 DPSS*KXKKLVQDNFSWNGTDKDGRKFNQGKIFK 327
           D  S + KKLV   FSW+GTDKDGRKFNQGKIFK
Sbjct: 327 DAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 360


>AE014297-4355|AAN14165.1|  431|Drosophila melanogaster CG11901-PB,
           isoform B protein.
          Length = 431

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = -3

Query: 428 DPSS*KXKKLVQDNFSWNGTDKDGRKFNQGKIFK 327
           D  S + KKLV   FSW+GTDKDGRKFNQGKIFK
Sbjct: 398 DAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431


>AE014297-4354|AAF56877.2|  431|Drosophila melanogaster CG11901-PA,
           isoform A protein.
          Length = 431

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/34 (73%), Positives = 27/34 (79%)
 Frame = -3

Query: 428 DPSS*KXKKLVQDNFSWNGTDKDGRKFNQGKIFK 327
           D  S + KKLV   FSW+GTDKDGRKFNQGKIFK
Sbjct: 398 DAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431


>AY226541-1|AAO47367.1|  485|Drosophila melanogaster pickpocket 10
           protein.
          Length = 485

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = +1

Query: 214 FRKLPTSTYLHLNVLFCKVFYSYCMKCVYIGWTXVGIHLNILPWLNFLPSLSVPFHEKLS 393
           F K      L  ++ FC +     +   Y   T +GI  N + W   LPS++V   ++L+
Sbjct: 42  FEKFLWLILLIASIYFCIIVCLSSIDRYYTKSTHIGIERNYIFWNTTLPSVTVCPVDRLN 101

Query: 394 WTSFLXF 414
            T F  +
Sbjct: 102 ITYFADY 108


>AE014134-1893|ABC65891.1|  485|Drosophila melanogaster CG34042-PB
           protein.
          Length = 485

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = +1

Query: 214 FRKLPTSTYLHLNVLFCKVFYSYCMKCVYIGWTXVGIHLNILPWLNFLPSLSVPFHEKLS 393
           F K      L  ++ FC +     +   Y   T +GI  N + W   LPS++V   ++L+
Sbjct: 42  FEKFLWLILLIASIYFCIIVCLSSIDRYYTKSTHIGIERNYIFWNTTLPSVTVCPVDRLN 101

Query: 394 WTSFLXF 414
            T F  +
Sbjct: 102 ITYFADY 108


>AY075158-1|AAL68028.1|  483|Drosophila melanogaster AT01495p
           protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 380 WNGTDKDGRKFNQGKIFK*MPTNVQPMYTH 291
           W   DKDGR+ +  K     PT+  P Y H
Sbjct: 397 WQSLDKDGRRESPSKTLS--PTSYTPSYIH 424


>AE014298-2181|AAF48480.1|  483|Drosophila melanogaster CG8105-PA
           protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 380 WNGTDKDGRKFNQGKIFK*MPTNVQPMYTH 291
           W   DKDGR+ +  K     PT+  P Y H
Sbjct: 397 WQSLDKDGRRESPSKTLS--PTSYTPSYIH 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,310,476
Number of Sequences: 53049
Number of extensions: 345394
Number of successful extensions: 1011
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)