Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0251.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060760-1|AAL28308.1|  290|Drosophila melanogaster GH21710p pro...    42   4e-04
AE014296-2352|AAF49764.1|  290|Drosophila melanogaster CG6833-PA...    42   4e-04
BT023775-1|AAZ41783.1|  681|Drosophila melanogaster LD29573p pro...    34   0.11 
AE014296-1132|AAN12085.1|  681|Drosophila melanogaster CG8368-PB...    34   0.11 
AE014296-1131|AAF50654.1|  681|Drosophila melanogaster CG8368-PA...    34   0.11 
AY089605-1|AAL90343.1|  349|Drosophila melanogaster RE21555p pro...    30   1.8  
AE014296-1664|AAF50264.1|  343|Drosophila melanogaster CG3437-PA...    30   1.8  
AY071538-1|AAL49160.1|  309|Drosophila melanogaster RE57705p pro...    28   9.6  
AE014297-1650|AAF54924.2|  309|Drosophila melanogaster CG8458-PA...    28   9.6  

>AY060760-1|AAL28308.1|  290|Drosophila melanogaster GH21710p
           protein.
          Length = 290

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +3

Query: 252 SVRQAVSRILKNCLLVGYDVSRSLRLLGLGHPEDNIRDVSTYHLYTR--XKXYNPTLXQL 425
           +V+  V +++   +LVG+ +   L +LG+ HP  +IRD S Y    +     + P+L +L
Sbjct: 183 AVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKLISNTHTPSLKRL 242

Query: 426 XRSYLSRGLE-APRTAVKDATAXM 494
            ++ L + ++     +V+DA A M
Sbjct: 243 TKAVLGQEIQTGEHNSVEDARAAM 266



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 20/63 (31%), Positives = 37/63 (58%)
 Frame = +1

Query: 52  VSIDCKSIGVESSEGIRNYPASVAIVNEDKICVYNAVINPRNLQISDYRTRFHGIQAQDL 231
           +++DC+ +GV  +    +  A V+IVN     + +  + PR  +++DYRT   GI+ QD+
Sbjct: 118 LAMDCEMVGVGHNTR-DDMLARVSIVNRMGHVLLDKYVKPRK-EVTDYRTSVSGIRPQDI 175

Query: 232 SRG 240
           + G
Sbjct: 176 ANG 178


>AE014296-2352|AAF49764.1|  290|Drosophila melanogaster CG6833-PA
           protein.
          Length = 290

 Score = 42.3 bits (95), Expect = 4e-04
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +3

Query: 252 SVRQAVSRILKNCLLVGYDVSRSLRLLGLGHPEDNIRDVSTYHLYTR--XKXYNPTLXQL 425
           +V+  V +++   +LVG+ +   L +LG+ HP  +IRD S Y    +     + P+L +L
Sbjct: 183 AVQNEVMKLIHGRILVGHGLRNDLAVLGIRHPFHDIRDTSHYKPLCKLISNTHTPSLKRL 242

Query: 426 XRSYLSRGLE-APRTAVKDATAXM 494
            ++ L + ++     +V+DA A M
Sbjct: 243 TKAVLGQEIQTGEHNSVEDARAAM 266



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 20/63 (31%), Positives = 37/63 (58%)
 Frame = +1

Query: 52  VSIDCKSIGVESSEGIRNYPASVAIVNEDKICVYNAVINPRNLQISDYRTRFHGIQAQDL 231
           +++DC+ +GV  +    +  A V+IVN     + +  + PR  +++DYRT   GI+ QD+
Sbjct: 118 LAMDCEMVGVGHNTR-DDMLARVSIVNRMGHVLLDKYVKPRK-EVTDYRTSVSGIRPQDI 175

Query: 232 SRG 240
           + G
Sbjct: 176 ANG 178


>BT023775-1|AAZ41783.1|  681|Drosophila melanogaster LD29573p
           protein.
          Length = 681

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +1

Query: 58  IDCKSIGVESSEGIRNYPASVAIVNEDKICVYNAVINPRNLQISDYRTRFHGIQAQ 225
           +DC+    E+     N    ++IVNE+   VY  ++ P N +I+DY T++ GI A+
Sbjct: 359 VDCEMCHTEAG---CNELTRISIVNENYETVYETLVLPNN-RITDYLTQYSGITAE 410


>AE014296-1132|AAN12085.1|  681|Drosophila melanogaster CG8368-PB,
           isoform B protein.
          Length = 681

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +1

Query: 58  IDCKSIGVESSEGIRNYPASVAIVNEDKICVYNAVINPRNLQISDYRTRFHGIQAQ 225
           +DC+    E+     N    ++IVNE+   VY  ++ P N +I+DY T++ GI A+
Sbjct: 359 VDCEMCHTEAG---CNELTRISIVNENYETVYETLVLPNN-RITDYLTQYSGITAE 410


>AE014296-1131|AAF50654.1|  681|Drosophila melanogaster CG8368-PA,
           isoform A protein.
          Length = 681

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +1

Query: 58  IDCKSIGVESSEGIRNYPASVAIVNEDKICVYNAVINPRNLQISDYRTRFHGIQAQ 225
           +DC+    E+     N    ++IVNE+   VY  ++ P N +I+DY T++ GI A+
Sbjct: 359 VDCEMCHTEAG---CNELTRISIVNENYETVYETLVLPNN-RITDYLTQYSGITAE 410


>AY089605-1|AAL90343.1|  349|Drosophila melanogaster RE21555p
           protein.
          Length = 349

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +2

Query: 203 VFMEY-RLRICQEAYTSKCSSSCESDIKKLSLSRL*CFEKLEAIGSG---APRR*YKRCF 370
           +F+ Y R R+C+E         C   +++     L C+E+LE + S      R   +RCF
Sbjct: 123 MFLAYSRYRLCEEPIEKFDLKICNQHLQECLTGVLCCYEELEDLESSREPTVRELERRCF 182

Query: 371 HVSSLYKV 394
            + SLY++
Sbjct: 183 -IESLYQL 189


>AE014296-1664|AAF50264.1|  343|Drosophila melanogaster CG3437-PA
           protein.
          Length = 343

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
 Frame = +2

Query: 203 VFMEY-RLRICQEAYTSKCSSSCESDIKKLSLSRL*CFEKLEAIGSG---APRR*YKRCF 370
           +F+ Y R R+C+E         C   +++     L C+E+LE + S      R   +RCF
Sbjct: 117 MFLAYSRYRLCEEPIEKFDLKICNQHLQECLTGVLCCYEELEDLESSREPTVRELERRCF 176

Query: 371 HVSSLYKV 394
            + SLY++
Sbjct: 177 -IESLYQL 183


>AY071538-1|AAL49160.1|  309|Drosophila melanogaster RE57705p
           protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +3

Query: 99  QKLPRVCGYRKRGQDMRL*RCH*PKKLTDFRL 194
           Q+L RVCGYR R Q +R  R    K +  FRL
Sbjct: 263 QQLCRVCGYRVRSQHVRTERRCNCKLVWGFRL 294


>AE014297-1650|AAF54924.2|  309|Drosophila melanogaster CG8458-PA
           protein.
          Length = 309

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +3

Query: 99  QKLPRVCGYRKRGQDMRL*RCH*PKKLTDFRL 194
           Q+L RVCGYR R Q +R  R    K +  FRL
Sbjct: 263 QQLCRVCGYRVRSQHVRTERRCNCKLVWGFRL 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,143,705
Number of Sequences: 53049
Number of extensions: 457375
Number of successful extensions: 1037
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)