Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0249.Seq
         (499 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    25   0.50 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   2.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   6.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   6.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.1  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = +3

Query: 264 CELNAQQTLLATHALWIVGQ---IVFLVSFLIITTVTFLL 374
           C L+   + L T    I G    ++F VSFLIIT V F++
Sbjct: 223 CTLHHHLSKLVTRFNEIFGLGLLLMFAVSFLIITQVIFVI 262


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 338 QFPHHHHGHLPSCVPT 385
           + PH  HG+L SC PT
Sbjct: 344 RMPHRCHGNLQSC-PT 358


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 333 LVSFLIITTVTFLLAFQHEPGFSLAQV 413
           L  FLIIT   + L  Q + GFS   +
Sbjct: 293 LYLFLIITLTIYGLLSQLQAGFSTKDI 319


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +3

Query: 276 AQQTLLATH-ALWIVG---QIVFLVSFLIITTVTFLL 374
           + Q L  TH AL I+G   +   + SFL++TT+T L+
Sbjct: 2   SSQLLKLTHDALKILGIGPKSNKIYSFLLLTTLTLLV 38


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 350 HHHGHLP 370
           HHH H+P
Sbjct: 51  HHHSHMP 57


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 350 HHHGHLP 370
           HHH H+P
Sbjct: 51  HHHSHMP 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,374
Number of Sequences: 336
Number of extensions: 1113
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)