Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0249.Seq
         (499 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    27   0.47 
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    26   0.62 
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   1.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.1  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   1.9  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   4.4  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   5.8  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    23   5.8  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 26.6 bits (56), Expect = 0.47
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 261 KCELNAQQTLLATHALWIVGQIVFLVSFLIITT 359
           K  +  + TL    ++WIVG I+   S L  TT
Sbjct: 187 KPRMGKKATLCVAASIWIVGTIISCPSLLFFTT 219


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 195 LVRDPGPVRGLARPHRRASHVTKCELNAQQTLLATHALWIVGQIV 329
           LV  P P + L    R     +    ++   LLAT  +W  GQ++
Sbjct: 58  LVTVPAPAKELTDSSRSGGLPSSSSSSSLSCLLATIVMWCTGQVL 102


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect(2) = 1.1
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 344 PHHHHGH 364
           PHHHH H
Sbjct: 502 PHHHHHH 508



 Score = 21.4 bits (43), Expect(2) = 1.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 347 HHHHGHLPS 373
           HHHH H P+
Sbjct: 506 HHHHHHHPT 514


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = +3

Query: 189 ELLVRDPGPVRGLARPHRRASHVTKCELNAQQTLLA 296
           E  V   G VRGLAR H  A   + C L   Q+ LA
Sbjct: 32  ETRVHPGGGVRGLARIHVAAGFGSCCALFGVQSKLA 67


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 249 SHVTKCELNAQQTLLATHALWIVGQIVFLVSFLIITTVTFLLAF 380
           S+VT C++  + T       +I   IVF+V F II  +  + +F
Sbjct: 185 SNVTICDMRKEYTSQMEIFNYIDTVIVFVVPFTIIVVLNSVTSF 228


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = +3

Query: 261 KCELNAQQTLLATHALWIVGQ------IVFLVSFLIITTVTFL 371
           +C LN    +L     W+VGQ      ++ +    ++TT+T L
Sbjct: 197 RCLLNIWGVMLFLRLSWVVGQAGIAQGVLLICMTTVVTTITAL 239


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 78  ESRFFSLSKLELXIIMYVLLF 16
           +S  FSL + E+ ++M  LLF
Sbjct: 123 QSELFSLGRYEMFLVMSPLLF 143


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 367 KVTVVMMRKLTRNTIWPTIHSAWVARSVCWALSSHLVTCE 248
           K+T+V    +  +TI          +  C+ + +HLVTC+
Sbjct: 324 KLTIVASNDINEDTILSLNEQGH--KIDCFGIGTHLVTCQ 361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,663
Number of Sequences: 2352
Number of extensions: 4781
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)